FC877922

Overview
NameFC877922
Unique NameFC877922
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length791
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13660 contig Ccv1_Contig13660:73..862. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877922 vs. ExPASy Swiss-Prot
Match: MCA4_ARATH (Metacaspase-4 OS=Arabidopsis thaliana GN=AMC4 PE=1 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 4.523e-89
Identity = 152/230 (66.09%), Postives = 177/230 (76.96%), Query Frame = 1
Query:   34 MTKKSVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTRR-----DEEEESGSGFNFKSFLHKKVENAFESRGIHIPSGLRHHRPSGDEDVEDREVEAGYGEGGYHKNKSLP 708
            MTKK+VLIGINYPGTKAEL+GCVNDV+RMY CLV+RYGFSEENITVLIDTD+ STQPTG+NIRRAL +LV SA+ GDVL VHYSGHGTRLPA            CIVP DMNLITDDDFR+ VD++PPGC +T++SDSCHSGGLIDEAKEQIGEST++     DE EES S F F+ FL  KVE A ESRG HI    +    +  E++E +E+E   GE  + K+KSLP
Sbjct:    1 MTKKAVLIGINYPGTKAELRGCVNDVRRMYKCLVERYGFSEENITVLIDTDESSTQPTGKNIRRALADLVESADSGDVLVVHYSGHGTRLPAETGEDDDTGFDECIVPCDMNLITDDDFRDLVDKVPPGCRMTIISDSCHSGGLIDEAKEQIGESTKKEAEDEDESEESSSRFGFRKFLRSKVEGAIESRGFHIGGNKKDEDEA--EEIETKEIELEDGETIHAKDKSLP 228          

HSP 2 Score: 46.2098 bits (108), Expect = 4.523e-89
Identity = 21/28 (75.00%), Postives = 25/28 (89.29%), Query Frame = 2
Query:  707 PLSTLIEILKQQTGKDDIDVGKIRPTPF 790
            PL TLI+ILKQQTG D+I+VGKIRP+ F
Sbjct:  228 PLQTLIDILKQQTGNDNIEVGKIRPSLF 255          
BLAST of FC877922 vs. ExPASy Swiss-Prot
Match: MCA5_ARATH (Metacaspase-5 OS=Arabidopsis thaliana GN=AMC5 PE=1 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.103e-78
Identity = 139/227 (61.23%), Postives = 170/227 (74.89%), Query Frame = 1
Query:   34 MTKKSVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTRRDEEEESG--SGFNFKSFLHKKVENAFESRGIHIPSGLRHHRPSGDEDVEDREVEAGYGEGGYHKNKSLP 708
            M KK+VLIGINYPGTKAEL+GCVNDV+R++  LVDR+GFSE NIT LIDTD+ ST+PTG+NIRRAL NLV SA+PGDVL VHYSGHGTRLPA            CIVP DMNLITDD+FR+ V+++P    IT++SDSCHSGGLIDEAKEQIGEST++  ++ESG  SG   K F+ + VE A ES+GI IP    HH+   DE+ + +E++   G   +  NKSLP
Sbjct:    1 MAKKAVLIGINYPGTKAELRGCVNDVRRVHKSLVDRFGFSERNITELIDTDESSTKPTGKNIRRALLNLVESAKPGDVLVVHYSGHGTRLPAETGEDDDTGYDECIVPCDMNLITDDEFRDLVEKVPKEAHITIISDSCHSGGLIDEAKEQIGESTKKKPKKESGGSSGLGIKGFVREAVEEALESKGIAIP----HHKDEKDEN-KTKELKLEDGAKVHVVNKSLP 222          

HSP 2 Score: 45.8246 bits (107), Expect = 1.103e-78
Identity = 21/28 (75.00%), Postives = 24/28 (85.71%), Query Frame = 2
Query:  707 PLSTLIEILKQQTGKDDIDVGKIRPTPF 790
            PL TLI+ILKQ TG +DI+VGKIRPT F
Sbjct:  222 PLQTLIDILKQNTGNNDIEVGKIRPTLF 249          
BLAST of FC877922 vs. ExPASy Swiss-Prot
Match: MCA7_ARATH (Metacaspase-7 OS=Arabidopsis thaliana GN=AMC7 PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 2.429e-69
Identity = 125/219 (57.08%), Postives = 149/219 (68.04%), Query Frame = 1
Query:   34 MTKKSVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTR---RDEEEESGSGFNFKSFLHKKVENAFESRGIHIPSGLRHHRPSGDEDVEDRE-VEAGYGE 678
            M K+++LIGINYPGT  EL+GCVNDV RM+ CLVDR+GF+EE+ITVLIDTD+  TQPTG+NIR+AL  L++ A+ GDVLFVHYSGHGTR+P             CIVPSD+N I DDDFR+ V+Q+P GC+IT+VSDSCHSGGLIDEAKEQIGEST      E + S   F FK+ LH          GI            G   VE RE VE G G+
Sbjct:    1 MAKRALLIGINYPGTTEELQGCVNDVHRMHKCLVDRFGFAEEDITVLIDTDESYTQPTGKNIRQALSELIKPAKSGDVLFVHYSGHGTRVPPETGEEDDTGFDECIVPSDLNPIPDDDFRDLVEQVPEGCQITIVSDSCHSGGLIDEAKEQIGESTTTKPNRESKVSSFEFEFKNCLHSIFVKLLAFCGI------------GSSHVETREIVEVGEGD 207          

HSP 2 Score: 46.9802 bits (110), Expect = 2.429e-69
Identity = 20/35 (57.14%), Postives = 28/35 (80.00%), Query Frame = 2
Query:  686 IIRTSPYPLSTLIEILKQQTGKDDIDVGKIRPTPF 790
            ++R+   PL   IE+LKQQTG+D+I++GKIRPT F
Sbjct:  209 VVRSRYLPLERFIELLKQQTGQDNIEIGKIRPTLF 243          
BLAST of FC877922 vs. ExPASy Swiss-Prot
Match: MCA6_ARATH (Metacaspase-6 OS=Arabidopsis thaliana GN=AMC6 PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.425e-60
Identity = 113/169 (66.86%), Postives = 132/169 (78.11%), Query Frame = 1
Query:   34 MTKKSVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTRRDEEEESGSGFN 540
            M KK++LIGINY GTKAEL+GCVNDV+RM   LV+RYGFSEENI +LIDTD  S +PTG+NIR+AL +LV  A+ GDVLFVHYSGHGTRLPA            CIVPSDMNLITDDDFR+ VD +P  C IT++SDSCHSGGLIDEAKEQIGEST++ ++    S  N
Sbjct:    1 MAKKALLIGINYVGTKAELRGCVNDVRRMRISLVERYGFSEENIKMLIDTDSSSIKPTGKNIRQALLDLVEPAKSGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFRDLVDMVPKDCPITIISDSCHSGGLIDEAKEQIGESTKKKKDSGDSSTIN 169          
BLAST of FC877922 vs. ExPASy Swiss-Prot
Match: MCA8_ARATH (Metacaspase-8 OS=Arabidopsis thaliana GN=AMC8 PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.168e-46
Identity = 88/156 (56.41%), Postives = 108/156 (69.23%), Query Frame = 1
Query:   34 MTKKSVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRL-PAXXXXXXXXXXXXCIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGES 498
            M KK++LIGINYPGT  EL+GCVNDV RM  CL++ YGF+ ++I ++IDTD    QPTG+NI   L NL+ S + GD L  HYSGHGTR+ P             CI P DMNLI D  FRE V ++  GC++T++SDSCHSGGLI E KEQIGES
Sbjct:    1 MAKKALLIGINYPGTAVELRGCVNDVHRMQKCLIELYGFANKDIVIMIDTDKSCIQPTGKNICDELDNLIASGQSGDFLVFHYSGHGTRIPPGIEDSEDPTGFDECITPCDMNLIKDQQFREMVSRVKEGCQLTIISDSCHSGGLIQEVKEQIGES 156          
BLAST of FC877922 vs. ExPASy Swiss-Prot
Match: MCA9_ARATH (Metacaspase-9 OS=Arabidopsis thaliana GN=AMC9 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.865e-39
Identity = 82/164 (50.00%), Postives = 108/164 (65.85%), Query Frame = 1
Query:   22 EENKMTKK--SVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPG--DVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGEST 501
            ++  M KK  +VL+G NYP T+ EL GC+NDV  M   ++ R+GF +++I VL D  +   +PTG NI+ AL  +V  A+ G  D+LF HYSGHGTR+P+             IVP D NLITD DFRE V+Q+P G   T++SDSCHSGGLID+ KEQIG S+
Sbjct:    2 DQQGMVKKRLAVLVGCNYPNTRNELHGCINDVLAMKETILSRFGFKQDDIEVLTDEPESKVKPTGANIKAALRRMVDKAQAGSGDILFFHYSGHGTRIPSVKSAHPFKQDE-AIVPCDFNLITDVDFRELVNQLPKGTSFTMISDSCHSGGLIDKEKEQIGPSS 164          
BLAST of FC877922 vs. ExPASy Swiss-Prot
Match: MCA1A_ASPOR (Metacaspase-1A OS=Aspergillus oryzae GN=casA PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 6.238e-24
Identity = 60/150 (40.00%), Postives = 85/150 (56.67%), Query Frame = 1
Query:   37 TKKSVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDR-STQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM----NLITDDDFREFVDQIPPGCEITVVSDSCHSGGLID 471
            T+K++LIGINY   K +L+GC+NDVK M   L + +G+  EN+ +L D      +QPT  NI RA+  LV+ A+P D LF HYSGHG + P              I P D     +++ D+  R  V+ + PG  +T + DSCHSG  +D
Sbjct:  105 TRKALLIGINYFNQKGQLRGCINDVKNMSTYLHENFGYPRENMVLLTDDQQNPKSQPTKANILRAMHWLVKDAKPNDSLFFHYSGHGGQTP-DLDGDEDDGYDEVIYPVDFRQAGHIVDDEMHRIMVNPLQPGVRLTAIFDSCHSGSALD 253          
BLAST of FC877922 vs. ExPASy Swiss-Prot
Match: MCA1_PICST (Metacaspase-1 OS=Pichia stipitis GN=MCA1 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.064e-23
Identity = 62/149 (41.61%), Postives = 84/149 (56.38%), Query Frame = 1
Query:   40 KKSVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLI-DTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM----NLITDDDFREFVDQIPPGCEITVVSDSCHSGGLID 471
            KK++L+G+NY G+  EL+GC+NDVK M + LVD +G+   +I +L  D +D S  PT  NI RA+  LV+ A P D L  HYSGHG    A             I P D     +++ DD     V  +PPGC +T + DSCHSG  +D
Sbjct:  109 KKALLVGVNYFGSPNELRGCINDVKNMSSFLVDHWGYQWNDIVILTDDQNDISRVPTKNNIIRAMQWLVKDARPNDSLVFHYSGHG-GTTADTDGDEESGYDDVIYPVDFQQAGHIVDDDMHAIMVRPLPPGCRLTALYDSCHSGTALD 256          
BLAST of FC877922 vs. ExPASy Swiss-Prot
Match: MCA1_EMENI (Metacaspase-1 OS=Emericella nidulans GN=casA PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.815e-23
Identity = 59/149 (39.60%), Postives = 84/149 (56.38%), Query Frame = 1
Query:   40 KKSVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDR-STQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM----NLITDDDFREFVDQIPPGCEITVVSDSCHSGGLID 471
            +K++LIGINY G K +L+GC+NDVK M   L   +G++ E++ +L D      +QPT  NI RA+  LV+ A+P D LF HYSGHG + P              I P D     +++ D+  R  V  + PG  +T + DSCHSG  +D
Sbjct:  111 RKALLIGINYFGQKGQLRGCINDVKNMSTYLNQNFGYAREDMVILTDDQQNPMSQPTKANILRAMHWLVKDAQPNDSLFFHYSGHGGQTP-DLDGDEDDGYDEVIYPVDFRVAGHIVDDEMHRIMVKPLQPGVRLTAIFDSCHSGSALD 258          
BLAST of FC877922 vs. ExPASy Swiss-Prot
Match: MCA1A_ASPTN (Metacaspase-1A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=casA PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.815e-23
Identity = 59/149 (39.60%), Postives = 85/149 (57.05%), Query Frame = 1
Query:   40 KKSVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDR-STQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM----NLITDDDFREFVDQIPPGCEITVVSDSCHSGGLID 471
            +K++LIGINY G K +L+GC+NDVK M   L   +G++ E++ +L D      +QPT  NI RA+  LV+ A+P D LF HYSGHG + P              I P D     +++ D+  R  V+ + PG  +T + DSCHSG  +D
Sbjct:  110 RKALLIGINYFGQKGQLRGCINDVKNMSTYLNQNFGYAREDMVLLTDDQQNPMSQPTKANILRAMHWLVKDAQPNDSLFFHYSGHGGQTP-DLDGDEDDGYDEVIYPVDFRVAGHIVDDEMHRIMVNPLKPGTRLTAIFDSCHSGSALD 257          
The following BLAST results are available for this feature:
BLAST of FC877922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
MCA4_ARATH4.523e-8966.09Metacaspase-4 OS=Arabidopsis thaliana GN=AMC4 PE=1... [more]
MCA5_ARATH1.103e-7861.23Metacaspase-5 OS=Arabidopsis thaliana GN=AMC5 PE=1... [more]
MCA7_ARATH2.429e-6957.08Metacaspase-7 OS=Arabidopsis thaliana GN=AMC7 PE=1... [more]
MCA6_ARATH2.425e-6066.86Metacaspase-6 OS=Arabidopsis thaliana GN=AMC6 PE=1... [more]
MCA8_ARATH1.168e-4656.41Metacaspase-8 OS=Arabidopsis thaliana GN=AMC8 PE=1... [more]
MCA9_ARATH6.865e-3950.00Metacaspase-9 OS=Arabidopsis thaliana GN=AMC9 PE=1... [more]
MCA1A_ASPOR6.238e-2440.00Metacaspase-1A OS=Aspergillus oryzae GN=casA PE=3 ... [more]
MCA1_PICST1.064e-2341.61Metacaspase-1 OS=Pichia stipitis GN=MCA1 PE=3 SV=1[more]
MCA1_EMENI1.815e-2339.60Metacaspase-1 OS=Emericella nidulans GN=casA PE=2 ... [more]
MCA1A_ASPTN1.815e-2339.60Metacaspase-1A OS=Aspergillus terreus (strain NIH ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA94CE10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA94CE10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877922 ID=FC877922; Name=FC877922; organism=Citrus clementina; type=EST; length=791bp
TTTCTTTTGAGATTATCAGAAGAGGAAAACAAAATGACGAAAAAATCGGT
GTTAATAGGCATAAACTACCCGGGAACGAAAGCGGAGCTGAAGGGGTGCG
TTAACGACGTTAAACGGATGTATGCATGTTTGGTGGATCGTTACGGATTC
TCGGAGGAGAACATAACGGTGTTGATCGATACGGATGATAGGTCTACCCA
GCCGACTGGGCGGAATATTAGGAGGGCTTTGGGCAATTTGGTGCGATCGG
CTGAGCCCGGTGACGTGCTGTTTGTTCACTACAGCGGGCATGGGACCAGG
CTTCCTGCTGAGACTGGGGAGGACGACGATACTGGTTATGATGAGTGCAT
TGTTCCTTCTGATATGAATCTTATTACTGATGATGATTTCAGGGAGTTTG
TAGACCAAATCCCACCAGGTTGTGAGATAACAGTTGTATCTGATTCTTGC
CATAGTGGTGGCCTTATTGATGAGGCTAAGGAGCAGATTGGGGAGAGCAC
AAGGCGTGATGAAGAGGAAGAATCTGGTTCTGGTTTTAACTTCAAAAGCT
TCTTGCACAAGAAAGTTGAAAATGCATTTGAATCTCGTGGAATTCACATT
CCTTCTGGGCTGCGCCATCACCGCCCTAGTGGTGATGAAGATGTTGAAGA
TCGTGAAGTTGAAGCCGGATATGGTGAGGGAGGTTATCATAAGAACAAGT
CCCTACCCCCTCTCAACACTTATTGAAATACTCAAGCAGCAAACTGGTAA
AGATGACATTGACGTCGGGAAGATAAGGCCAACCCCTTTTT
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