FC877925
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877925 vs. ExPASy Swiss-Prot
Match: RHM2_ARATH (Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1) HSP 1 Score: 341.658 bits (875), Expect = 2.819e-93 Identity = 164/234 (70.09%), Postives = 191/234 (81.62%), Query Frame = 3 Query: 51 LTDPNSNRNPIQSHLSFAFTHHYPMGFPANGSDAGSKPLKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPFPL 752 L+D +S + + S+ FT + P NG LKFLIYG+TGW+GGLLGKLC+ Q I + YG GRLE+RASL ADI ++KPTHVFNAAG+TGRPNVDWCESHK ETIR NV GTLTLADVCR+ L+++N+ATGCIFEYD+ HP GSGIGFKEED PNF GSFYSKTKAMVEELL+ F+NVCTLRVRMPISSDL+NPRNFITKI+RY KVV+IPNSMT+LDELLP + Sbjct: 349 LSDGSSEKKDVSSNTVQTFT----VVTPKNGDSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVADIRSIKPTHVFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDATHPEGSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVDIPNSMTVLDELLPISI 578
BLAST of FC877925 vs. ExPASy Swiss-Prot
Match: RHM3_ARATH (Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana GN=RHM3 PE=2 SV=1) HSP 1 Score: 336.65 bits (862), Expect = 9.067e-92 Identity = 157/204 (76.96%), Postives = 178/204 (87.25%), Query Frame = 3 Query: 141 GSDAGSKPLKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPFPL 752 G + LKFLIYG+TGW+GGLLGKLC+ Q I + YG GRLE+RASL ADI ++KP+HVFNAAG+TGRPNVDWCESHK ETIR NV GTLTLADVCR+ L+++N+ATGCIFEYD+ HP GSGIGFKEED PNF GSFYSKTKAMVEELL+ F+NVCTLRVRMPISSDL+NPRNFITKI+RY KVVNIPNSMTILDELLP + Sbjct: 372 GCSGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADIRSIKPSHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISI 575
BLAST of FC877925 vs. ExPASy Swiss-Prot
Match: RHM1_ARATH (Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana GN=RHM1 PE=2 SV=1) HSP 1 Score: 335.88 bits (860), Expect = 1.547e-91 Identity = 163/216 (75.46%), Postives = 183/216 (84.72%), Query Frame = 3 Query: 108 THHYPMGFPANGSDAGSKP-LKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPFPL 752 TH +NG+ KP LKFLIYG+TGWIGGLLGK+C Q I + YG GRLE+R+SL DI +VKPTHVFN+AGVTGRPNVDWCESHK ETIR NV GTLTLADVCR+ GL+++N+ATGCIFEYD HP GSGIGFKEEDTPNF GSFYSKTKAMVEELLK ++NVCTLRVRMPISSDL+NPRNFITKI+RY KVVNIPNSMT+LDELLP + Sbjct: 367 THMVVPSQRSNGTP--QKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMNFATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISI 580
BLAST of FC877925 vs. ExPASy Swiss-Prot
Match: YL780_MIMIV (Uncharacterized protein L780 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L780 PE=4 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.125e-32 Identity = 77/199 (38.69%), Postives = 115/199 (57.79%), Query Frame = 3 Query: 165 LKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVTGRPN---VDWCESHK--VETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFEN-VCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLP 743 +K+LI+G GWIG ++ K+ + Q R ++ +++E +I+ +KP V + G T P +D+ E VE ++ N+ G L LA +C+ + L TGCIFE + GF E D PNF GS YS K + L+ F+N V LR+RMPI+ + NPR+FITKI Y ++ +IPNSMTILD+++P Sbjct: 1 MKWLIFGNKGWIGSMVSKILEQQGEQVVGAQSRADDESAVEREISEIKPDRVMSFIGRTHGPGYSTIDYLEQSGKLVENVKDNLYGPLCLAFICQKYNIHLTYLGTGCIFEGQNNFSADEK-GFTENDKPNFFGSSYSVVKGFTDRLMHFFDNDVLNLRIRMPITIE-QNPRSFITKILSYSRICSIPNSMTILDQMIP 197 The following BLAST results are available for this feature:
BLAST of FC877925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877925 ID=FC877925; Name=FC877925; organism=Citrus clementina; type=EST; length=790bpback to top |