FC877935
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877935 vs. ExPASy Swiss-Prot
Match: GAT27_ARATH (GATA transcription factor 27 OS=Arabidopsis thaliana GN=TIFY2B PE=2 SV=2) HSP 1 Score: 197.593 bits (501), Expect = 8.913e-50 Identity = 109/189 (57.67%), Postives = 131/189 (69.31%), Query Frame = 1 Query: 343 VVVAAASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDIPTGVPTIEVPYDQSNR--GVVDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYSVRKEVAQRMHRKNGQFASLKES-----SGASPWDSSQDGIQDG--TPRPETVVRRCQHCGVSENNTPAMRRGPAGLRTLCNACGLMWANKG 882 VV +LTLSF+G+VYVF V+PEKVQAVLLLLGGR++P +PT Q+NR G+ TP+R ++ +R+ASL+RFREKRK R FDK IRY+VRKEVA RM RK GQF S K S S S W S+Q +G T +PE + C+HCG SE +TP MRRGP G RTLCNACGLMWANKG Sbjct: 69 VVDRGIENGDQLTLSFQGQVYVFDRVSPEKVQAVLLLLGGREVPHTLPTTLGSPHQNNRVLGLSGTPQRLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDDSGSTGSDWGSNQSWAVEGTETQKPEVL---CRHCGTSEKSTPMMRRGPDGPRTLCNACGLMWANKG 254
BLAST of FC877935 vs. ExPASy Swiss-Prot
Match: GAT25_ARATH (GATA transcription factor 25 OS=Arabidopsis thaliana GN=TIFY2A PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 8.342e-48 Identity = 104/188 (55.32%), Postives = 129/188 (68.62%), Query Frame = 1 Query: 343 VVVAAASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDIPTGVPTIEVPYDQSNR--GVVDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYSVRKEVAQRMHRKNGQFASLKE-----SSGASPWDSSQD-GIQDGTPRPETVVRRCQHCGVSENNTPAMRRGPAGLRTLCNACGLMWANKG 882 VV + + +LTLSF+G+VYVF +V PEKVQAVLLLLGGR++P P Q+NR + TP+R ++ +R+ASLVRFREKRK R FDKKIRY+VRKEVA RM R GQF S K +S S W S+Q I+ + + + C+HCG+ E +TP MRRGPAG RTLCNACGLMWANKG Sbjct: 73 VVDRGSEQGDQLTLSFQGQVYVFDSVLPEKVQAVLLLLGGRELPQAAPPGLGSPHQNNRVSSLPGTPQRFSIPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASAGSSWGSNQTWAIESSEAQHQEI--SCRHCGIGEKSTPMMRRGPAGPRTLCNACGLMWANKG 258
BLAST of FC877935 vs. ExPASy Swiss-Prot
Match: GAT26_ARATH (GATA transcription factor 26 OS=Arabidopsis thaliana GN=TIFY1 PE=2 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 2.874e-40 Identity = 89/172 (51.74%), Postives = 112/172 (65.12%), Query Frame = 1 Query: 370 SELTLSFEGEVYVFPAVTPEKVQAVLLLLGGR-DIPTGVPTIEVPYDQSNRGVVDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYSVRKEVAQRMHRKNGQFASLKESSGASPWDSSQDGIQDGTPRPETVVRRCQHCGVSENNTPAMRRGPAGLRTLCNACGLMWANKG 882 ++LT+SF G+VYVF AV +KV AVL LLGG ++ G +E+ Q++ VV+ R +L +R SL RFR+KR RCF+KK+RY VR+EVA RM R GQF S K + GA + QD QD PE C HCG+S TP MRRGP+G RTLCNACGL WAN+G Sbjct: 82 NQLTISFRGQVYVFDAVGADKVDAVLSLLGGSTELAPGPQVMELAQQQNHMPVVEYQSRCSLPQRAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTDGAYNSGTDQDSAQDDA-HPEI---SCTHCGISSKCTPMMRRGPSGPRTLCNACGLFWANRG 249 The following BLAST results are available for this feature:
BLAST of FC877935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877935 ID=FC877935; Name=FC877935; organism=Citrus clementina; type=EST; length=954bpback to top |