FC877940
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877940 vs. ExPASy Swiss-Prot
Match: ARR1_ARATH (Two-component response regulator ARR1 OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 3.835e-45 Identity = 85/120 (70.83%), Postives = 101/120 (84.17%), Query Frame = 3 Query: 354 VPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 713 V + FP+GLRVLVVDDD TCL ILE+MLR CLY VT C++A +AL++LR+ K FD+V+SDVHMPDMDGFKLLEH+GLEMDLPVIMMSAD S V++G+ HGA DYLIKP+R E LKNI Sbjct: 29 VVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNI 148 HSP 2 Score: 26.1794 bits (56), Expect = 3.835e-45 Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 Query: 700 SLKIYWQHVVRKRWNE 747 +LK WQHVVRKR +E Sbjct: 144 ALKNIWQHVVRKRRSE 159
BLAST of FC877940 vs. ExPASy Swiss-Prot
Match: ARR2_ARATH (Two-component response regulator ARR2 OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 2.449e-44 Identity = 86/125 (68.80%), Postives = 100/125 (80.00%), Query Frame = 3 Query: 339 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 713 AA + D FPA LRVLVVDDD TCL ILE+ML CLY VT C++A AL++LR+ K FD+V+SDVHMPDMDGFKLLEH+GLEMDLPVIMMSAD S V++G+ HGA DYLIKP+R E LKNI Sbjct: 15 AAGGSNSDPFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNI 139 HSP 2 Score: 26.9498 bits (58), Expect = 2.449e-44 Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 Query: 700 SLKIYWQHVVRKRWNE 747 +LK WQHVVRK+ NE Sbjct: 135 ALKNIWQHVVRKKRNE 150
BLAST of FC877940 vs. ExPASy Swiss-Prot
Match: ARR14_ARATH (Two-component response regulator ARR14 OS=Arabidopsis thaliana GN=ARR14 PE=1 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 5.452e-44 Identity = 88/121 (72.73%), Postives = 100/121 (82.64%), Query Frame = 3 Query: 354 VPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 713 + DQFP+GLR+LVVDDD +CL ILE+ML R +Y VT CSQA VAL ILRERK FD+VLSDVHMP M+G+ LL+ +G LEMDLPVIMMS DGR + VM GI HGACDYLIKPIR EELKNI Sbjct: 3 INDQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNI 123 HSP 2 Score: 23.483 bits (49), Expect = 5.452e-44 Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 1 Query: 703 LKIYWQHVVRKRWNENKE 756 LK WQHVVR++ KE Sbjct: 120 LKNIWQHVVRRKCVMKKE 137
BLAST of FC877940 vs. ExPASy Swiss-Prot
Match: ARR12_ARATH (Two-component response regulator ARR12 OS=Arabidopsis thaliana GN=ARR12 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.695e-42 Identity = 81/118 (68.64%), Postives = 95/118 (80.51%), Query Frame = 3 Query: 360 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 713 DQFP G+RVL VDDD TCL+ILE +LR C Y+VTT +QA AL +LRE K FD+V+SDV MPDMDGFKLLE +GLEMDLPVIM+SA VM+G+ HGACDYL+KP+R EELKNI Sbjct: 11 DQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNI 128 HSP 2 Score: 26.9498 bits (58), Expect = 1.695e-42 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 1 Query: 703 LKIYWQHVVRKRWNENK 753 LK WQHVVR R+++N+ Sbjct: 125 LKNIWQHVVRSRFDKNR 141
BLAST of FC877940 vs. ExPASy Swiss-Prot
Match: ARR10_ARATH (Two-component response regulator ARR10 OS=Arabidopsis thaliana GN=ARR10 PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 2.210e-42 Identity = 82/123 (66.67%), Postives = 100/123 (81.30%), Query Frame = 3 Query: 345 DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 713 ++ V DQFP G+RVL VDDD TCLRIL+ +L+RC Y+VTT +QA AL +LRE K FD+V+SDV MPDMDGFKLLE +GLEMDLPVIM+SA VM+G++HGACDYL+KP+R EELKNI Sbjct: 6 EIEVLDQFPVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNI 128 HSP 2 Score: 22.7126 bits (47), Expect = 2.210e-42 Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 1 Query: 703 LKIYWQHVVRK 735 LK WQHVVRK Sbjct: 125 LKNIWQHVVRK 135
BLAST of FC877940 vs. ExPASy Swiss-Prot
Match: ARR11_ARATH (Two-component response regulator ARR11 OS=Arabidopsis thaliana GN=ARR11 PE=1 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 6.212e-42 Identity = 82/125 (65.60%), Postives = 101/125 (80.80%), Query Frame = 3 Query: 369 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNILAACCSEKVE 743 P GLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +LRERK +D+V+SDV+MPDMDGFKLLEH+GLE+DLPVIMMS DG S VM+G++HGACDYL+KPIR +ELK I +K++ Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVLRKKLQ 132
BLAST of FC877940 vs. ExPASy Swiss-Prot
Match: ARR18_ARATH (Two-component response regulator ARR18 OS=Arabidopsis thaliana GN=ARR18 PE=2 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.255e-34 Identity = 73/118 (61.86%), Postives = 91/118 (77.12%), Query Frame = 3 Query: 360 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 713 D+FP G+RVL VDD+ TCLR LE++L RC Y+VT ++ AL +LRE FD+V+SDV MPD DGFKLLE IGLEMDLPVIM+SA +VM+GI HGACDYL+KP+ +EL+NI Sbjct: 12 DKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNI 128
BLAST of FC877940 vs. ExPASy Swiss-Prot
Match: APRR4_ARATH (Putative two-component response regulator-like APRR4 OS=Arabidopsis thaliana GN=APRR4 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.628e-21 Identity = 52/114 (45.61%), Postives = 76/114 (66.67%), Query Frame = 3 Query: 366 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELK 707 FP GLRVLV D+D + L ILE+ L++ Y VT C++ A++ LR + FD+ + V+ + D F+ L IG EMDLP+I++S D V +V + + +GA DYLIKPIR E+L+ Sbjct: 38 FPEGLRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNNAEGDIFRFLSEIGSEMDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLR 151
BLAST of FC877940 vs. ExPASy Swiss-Prot
Match: ARR19_ARATH (Putative two-component response regulator ARR19 OS=Arabidopsis thaliana GN=ARR19 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 6.520e-20 Identity = 47/117 (40.17%), Postives = 75/117 (64.10%), Query Frame = 3 Query: 363 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 713 QFP VLVVD + T L ++Q++++ Y V+ + A AL L K ++V+ D HMP +DG + L+ I ++DLPV++MS D + +VM+ +GACDY++KP++EE + NI Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANI 145 HSP 2 Score: 22.3274 bits (46), Expect = 6.520e-20 Identity = 7/8 (87.50%), Postives = 8/8 (100.00%), Query Frame = 1 Query: 715 WQHVVRKR 738 WQH+VRKR Sbjct: 146 WQHIVRKR 153
BLAST of FC877940 vs. ExPASy Swiss-Prot
Match: EHD1_ORYSJ (Two-component response regulator EHD1 OS=Oryza sativa subsp. japonica GN=EHD1 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.540e-19 Identity = 44/116 (37.93%), Postives = 72/116 (62.07%), Query Frame = 3 Query: 366 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNI 713 +P GLRVLV+DDD + L ++E +L +C Y VTT A+ + + D+V+SD P DG +L+ + + +P ++M++ G + VM+ + +GA D+L+KP+R EEL NI Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNI 122 The following BLAST results are available for this feature:
BLAST of FC877940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877940 ID=FC877940; Name=FC877940; organism=Citrus clementina; type=EST; length=758bpback to top |