FC877946
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877946 vs. ExPASy Swiss-Prot
Match: BMS1_HUMAN (Ribosome biogenesis protein BMS1 homolog OS=Homo sapiens GN=BMS1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.828e-21 Identity = 40/79 (50.63%), Postives = 58/79 (73.42%), Query Frame = 3 Query: 267 QMNIAELNDLDEVTRI--EGFQTGTYLGMEIHDVPFEMVEYFDPCHPVLVGGIGLGKQNVGYMQARLKQHRWWHKKVLK 497 Q+N AE D D+ R+ EGF+ G Y+ +EI +VP E V+ FDP +P+++GG+G + NVGY+Q RLK+HR W+KK+LK Sbjct: 860 QLNRAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEFVQNFDPHYPIILGGLGNSEGNVGYVQMRLKKHR-WYKKILK 937 HSP 2 Score: 38.1206 bits (87), Expect = 1.828e-21 Identity = 23/64 (35.94%), Postives = 36/64 (56.25%), Query Frame = 2 Query: 2 DYEDLETCEKHEGQCEDNSGSVGIA---------NEDESAVEEWRLKKLTLRAKFNAQYDASES 166 D+EDLET + H+G+ N+ + I +E+ESA ++ KK L+ F+A+YD ES Sbjct: 782 DFEDLETGDVHKGKSGPNTQNEDIEKEVKEEIDPDEEESAKKKHLDKKRKLKEMFDAEYDEGES 845
BLAST of FC877946 vs. ExPASy Swiss-Prot
Match: BMS1_SCHPO (Ribosome biogenesis protein BMS1 homolog OS=Schizosaccharomyces pombe GN=SPBC31E1.06 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 2.208e-18 Identity = 43/94 (45.74%), Postives = 63/94 (67.02%), Query Frame = 3 Query: 228 LDWLTRRRLNFAKQM--NIAELNDLDEVTR--IEGFQTGTYLGMEIHDVPFEMVEYFDPCHPVLVGGIGLGKQNVGYMQARLKQHRWWHKKVLK 497 +DW T + A+Q+ N D+D +R IEG++ GTY+ + I+DVPFE VE+FD +PV+VGG+ +Q G +Q R+K+HR WHKK+LK Sbjct: 685 VDWYTEEKEKIARQLVINREAFEDMDPESRAEIEGYRAGTYVRIVINDVPFEFVEHFDSRYPVVVGGLLPNEQRYGLVQVRIKRHR-WHKKILK 777 HSP 2 Score: 26.9498 bits (58), Expect = 2.208e-18 Identity = 21/58 (36.21%), Postives = 29/58 (50.00%), Query Frame = 2 Query: 2 DYEDLETCE-KHEGQCEDNSGSVGIANEDESA--------VEEWRLKKLTLRAKFNAQ 148 D+EDLE E + + E++SGS A +ESA EE KK LR +F + Sbjct: 618 DFEDLEDEENSSDNEMEESSGSSVTAENEESADEVDFQTEREENARKKEELRLRFEEE 675 The following BLAST results are available for this feature:
BLAST of FC877946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877946 ID=FC877946; Name=FC877946; organism=Citrus clementina; type=EST; length=499bpback to top |