FC877950
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877950 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 6.495e-22 Identity = 43/92 (46.74%), Postives = 61/92 (66.30%), Query Frame = 2 Query: 539 EMSSKVGVCYGQLGNNLPSPQESVELMIKSLKATRVKIYDANPKILKALKNTDIQVSIMVPNEXXXXXXXXXXXXXDQWVRTNVLPYLPGTK 814 +++SK+G+ YG+ GNNLPSP +S+ IKS+KA VK+YDA+P+ L L T++ V+I VPN D+WVRTN+LPY P T+ Sbjct: 37 DLASKIGINYGRRGNNLPSPYQSINF-IKSIKAGHVKLYDADPESLTLLSQTNLYVTITVPNH-QITALSSNQTIADEWVRTNILPYYPQTQ 126 HSP 2 Score: 37.7354 bits (86), Expect = 6.495e-22 Identity = 20/41 (48.78%), Postives = 27/41 (65.85%), Query Frame = 1 Query: 793 PLSPRYQIRYLLVGNEIFSLPE*SIWPHLVPGMR*IRKSLK 915 P P+ QIR++LVGNEI S ++ +LVP MR I SL+ Sbjct: 120 PYYPQTQIRFVLVGNEILSYNSGNVSVNLVPAMRKIVNSLR 160
BLAST of FC877950 vs. ExPASy Swiss-Prot
Match: E1311_ARATH (Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 8.874e-17 Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 545 SSKVGVCYGQLGNNLPSPQESVELMIKSLKATRVKIYDANPKILKALKNTDIQVSIMVPNEXXXXXXXXXXXXXDQWVRTNVLPYLPGT 811 ++ +GV YGQ+G+NLPSP + + L IKS+ AT+VK+YDANP+ILKA NT I+ I + NE W++ NV P+LP T Sbjct: 26 TTSIGVNYGQIGDNLPSPTDVIPL-IKSIGATKVKLYDANPQILKAFSNTGIEFIIGLGNEYLSKMKDPSKAL--TWIKQNVTPFLPAT 111 HSP 2 Score: 28.4906 bits (62), Expect = 8.874e-17 Identity = 13/40 (32.50%), Postives = 23/40 (57.50%), Query Frame = 1 Query: 793 PLSPRYQIRYLLVGNEIFSLPE*SIWPHLVPGMR*IRKSL 912 P P I + +GNEI +L + S+ +L+P M+ + +L Sbjct: 106 PFLPATNITCITIGNEILALNDSSLTTNLLPAMQGVHSAL 145
BLAST of FC877950 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.828e-13 Identity = 44/110 (40.00%), Postives = 62/110 (56.36%), Query Frame = 2 Query: 485 VVAHLLLASVMFFSIGSAEMSSKVGVCYGQLGNNLPSPQESVELMIKSLKATRVKIYDANPKILKALKNTDIQVSIMVPNEXXXXXXXXXXXXXDQWVRTNVLPYLPGTK 814 +V + ++ + F + G M+SK+G+CYG+ +NLPSP EL I+ L V+IYDAN +LKA NT I++ I VPN D W+ N+LPY P TK Sbjct: 7 LVFWIFVSILAFLNFG---MASKIGICYGRNADNLPSPNRVSEL-IQHLNIKFVRIYDANIDVLKAFANTGIELMIGVPN-ADLLAFAQFQSNVDTWLSNNILPYYPSTK 111
BLAST of FC877950 vs. ExPASy Swiss-Prot
Match: GUB_NICPL (Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3) HSP 1 Score: 62.3882 bits (150), Expect = 1.507e-11 Identity = 39/115 (33.91%), Postives = 62/115 (53.91%), Query Frame = 2 Query: 476 MGLVVAHLLLASVMFFSIGSAEM--SSKVGVCYGQLGNNLPSPQESVELMIKSLKATRVKIYDANPKILKALKNTDIQVSIMVPNEXXXXXXXXXXXXXDQWVRTNVLPYLPGTK 814 + L +A ++L ++ + S E+ + VGVCYG LGNNLP + V+L KS R+++YD N L+AL+ ++I+V + VPN + WV+ NV + P K Sbjct: 8 IALQMAAIILLGLL---VSSTEIVGAQSVGVCYGMLGNNLPPASQVVQLY-KSKNIRRMRLYDPNQAALQALRGSNIEVMLGVPNS-DLQNIAANPSNANNWVQRNVRNFWPAVK 117 HSP 2 Score: 26.5646 bits (57), Expect = 1.507e-11 Identity = 14/38 (36.84%), Postives = 23/38 (60.53%), Query Frame = 1 Query: 802 PRYQIRYLLVGNEIFSLP-E*SIWPHLVPGMR*IRKSL 912 P + RY+ VGNE+ + S+ +L+P MR IR ++ Sbjct: 114 PAVKFRYIAVGNEVSPVTGTSSLTRYLLPAMRNIRNAI 151
BLAST of FC877950 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2) HSP 1 Score: 61.2326 bits (147), Expect = 2.515e-11 Identity = 32/87 (36.78%), Postives = 50/87 (57.47%), Query Frame = 2 Query: 554 VGVCYGQLGNNLPSPQESVELMIKSLKATRVKIYDANPKILKALKNTDIQVSIMVPNEXXXXXXXXXXXXXDQWVRTNVLPYLPGTK 814 +GV YGQ+ +NLP P E+V+L ++S +V++Y A+P I+KAL T + + I N QW+ +NVLP+ P +K Sbjct: 26 IGVNYGQVADNLPPPSETVKL-LQSTSIQKVRLYGADPAIIKALAGTGVGIVIGAAN-GDVPSLASDPNAATQWINSNVLPFYPASK 110 HSP 2 Score: 26.9498 bits (58), Expect = 2.515e-11 Identity = 13/41 (31.71%), Postives = 24/41 (58.54%), Query Frame = 1 Query: 793 PLSPRYQIRYLLVGNEIFSLPE*SIWPHLVPGMR*IRKSLK 915 P P +I + VGNEI + ++ L+P M+ ++K+L+ Sbjct: 104 PFYPASKIMLITVGNEILMSNDPNLVNQLLPAMQNVQKALE 144
BLAST of FC877950 vs. ExPASy Swiss-Prot
Match: E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 2.528e-11 Identity = 34/89 (38.20%), Postives = 53/89 (59.55%), Query Frame = 2 Query: 548 SKVGVCYGQLGNNLPSPQESVELMIKSLKATRVKIYDANPKILKALKNTDIQVSIMVPNEXXXXXXXXXXXXXDQWVRTNVLPYLPGTK 814 S +G+ YGQ+ NNLP P+ + L+ KS+ AT+VK+YDA+P+ L+A + ++++ + NE WV+ NV YLP TK Sbjct: 25 SSIGINYGQVANNLPPPKNVIPLL-KSVGATKVKLYDADPQALRAFAGSGFELTVALGNE--YLAQMSDPIKAQGWVKENVQAYLPNTK 110 HSP 2 Score: 21.557 bits (44), Expect = 2.528e-11 Identity = 11/37 (29.73%), Postives = 21/37 (56.76%), Query Frame = 1 Query: 802 PRYQIRYLLVGNEIFSLPE*SIWPHLVPGMR*IRKSL 912 P +I ++VGNE+ + + ++ L P M+ I +L Sbjct: 107 PNTKIVAIVVGNEVLTSNQSALTAALFPAMQSIHGAL 143 The following BLAST results are available for this feature:
BLAST of FC877950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877950 ID=FC877950; Name=FC877950; organism=Citrus clementina; type=EST; length=917bpback to top |