FC877951

Overview
NameFC877951
Unique NameFC877951
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length795
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877951 vs. ExPASy Swiss-Prot
Match: PMIP_MALGO (Mitochondrial intermediate peptidase OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=OCT1 PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.109e-20
Identity = 63/170 (37.06%), Postives = 93/170 (54.71%), Query Frame = 3
Query:  147 SNGVPTGLYGFDHLKSPNGFQRFVDDALERSSELVNYISEM---PSSV-EIIRAMDEISDAVCSVVDSAELCRQTHPDREFVEEASKASMRISEYLHYLNTNHTLYDA---VKKAELDGYLLPKEAHRAANHLRSDFEKGGIHLCADKLDRVNQLNMDIFQLCREFNQNI 635
            S GVPTGL+  DHL++P+ F       L R   LV  I+     PS +  ++R +D +SD +C V+D AEL R  HPD+ +   A+ A   +  Y++ LNT+  LYDA   V + +   + L +EA   A+    DFEK GIHL   + +R  +L+  I  L R F Q++
Sbjct:   84 SQGVPTGLFQIDHLRTPSDFLLLAQRTLIRCQLLVQRIARAIGNPSELARVVRNLDRLSDMLCGVIDMAELVRHAHPDQGWANAANDAYEYLCNYMNVLNTHTELYDALRCVMETKDIYHSLSQEAQAVAHIFMRDFEKSGIHLPPHERNRFVELSDQIMILGRAFLQDM 253          
BLAST of FC877951 vs. ExPASy Swiss-Prot
Match: PMIP_KLULA (Mitochondrial intermediate peptidase OS=Kluyveromyces lactis GN=OCT1 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.384e-20
Identity = 58/179 (32.40%), Postives = 98/179 (54.75%), Query Frame = 3
Query:  111 DHSTTRHFYTRTSNGVPTGLYGFDHLKSPNGFQRFVDDALERSSELVNYISEMPSSVEI---IRAMDEISDAVCSVVDSAELCRQTHPDREFVEEASKASMRISEYLHYLNTNHTLYDAVKKA--ELDGYLLPKEAHRAANHLRSDFEKGGIHLCADKLDRVNQLNMDIFQLCREFNQN 632
            + S  R F  R+++ + TGL+   +LKS NG   F   + E++ ELV  I  + +  E+   I+ +D++SD +C V+D  E  R THPD++FV+ A +   ++ E ++ LNT+  L D + +   E D   L  E  R    L  DFEK GI++  +  ++  QL+ +I  + ++F  N
Sbjct:   61 NESKGRKFGLRSTSDLETGLFQNSYLKSANGLVEFTQHSFEKAKELVQKIHSIETQDEMKYYIKDLDQLSDVLCRVIDLCEFIRATHPDKKFVQTAQQCHEKMFEIMNILNTDVRLCDLLTQCLRESDVLGLDSEEIRTGKILLEDFEKSGIYMKPEIREKFIQLSQEISVIGQDFINN 239          
BLAST of FC877951 vs. ExPASy Swiss-Prot
Match: MIPEP_MOUSE (Mitochondrial intermediate peptidase OS=Mus musculus GN=Mipep PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.083e-19
Identity = 63/185 (34.05%), Postives = 88/185 (47.57%), Query Frame = 3
Query:  153 GVPTGLYGFDHLKSPNGFQRFVDDALERSSELVNYISEMPSSVEIIRAMDEISDAVCSVVDSAELCRQTHPDREFVEEASKASMRISEYLHYLNTNHTLYDAVKKAELDGYL---LPKEAHRAANHLRSDFEKGGIHLCADKLDRVNQLNMDIFQLCREFNQNIINDPGHVDIFPESRIPKHIHH 698
            G   GL+G   L +P GFQ   ++AL+++  LV      P   + +   DE+SD +C V D A+  +  HPD  F E A +A   I   +  LNTN  LY ++++   D  L   L  E  R A     DFE  GIHL  +K  R   LN+ I  L   F     N P  +    +S +P+HI H
Sbjct:   58 GERRGLFGVPELSTPEGFQVAQEEALKKTEWLVERACSTPPGPQTVLIFDELSDCLCRVADLADFVKIGHPDPAFREAAQEACRSIGTMVEKLNTNVELYQSLQRLLGDKKLMESLDAETRRVAELFMFDFEISGIHLDEEKRRRAVDLNVKILDLSNAFLMR-TNFPNKI---RKSLLPEHIQH 238          
BLAST of FC877951 vs. ExPASy Swiss-Prot
Match: PMIP_DEBHA (Mitochondrial intermediate peptidase OS=Debaryomyces hansenii GN=OCT1 PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.038e-18
Identity = 58/170 (34.12%), Postives = 97/170 (57.06%), Query Frame = 3
Query:  150 NGVPTGLYGFDHLKSPNGFQRFVDDALERSSELV-NYISEMPSS----VEIIRAMDEISDAVCSVVDSAELCRQTHPDREFVEEASKASMRISEYLHYLNTNHTLYDAVKKAELDGYL---LPKEAHRAANHLRSDFEKGGIHLCADKLDRVNQLNMDIFQLCREFNQNI 635
            NGV  GL+    L SP G   F +++LER+  LV N ++E+ +S    +E I+ +D++SD +C V+D AE  R +HP +++V+ A +    + EY++ LNTN  LY++++   +D  +   L KE      +LR DFE+ GIH+  +  +    +  +I  L   FN +I
Sbjct:   76 NGV--GLFRNRALISPQGLVDFSEESLERAKMLVSNMMAEVKTSEQGRLEYIKKLDQLSDVLCRVIDVAEFIRVSHPSQKWVDAAQRTHEIMFEYMNQLNTNVELYESLRDLLIDPAITTKLSKEEIEVGEYLRQDFERSGIHMDPNTRNNFVAITQEISLLGSHFNNDI 243          
BLAST of FC877951 vs. ExPASy Swiss-Prot
Match: PMIP_USTMA (Mitochondrial intermediate peptidase OS=Ustilago maydis GN=OCT1 PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.770e-18
Identity = 64/185 (34.59%), Postives = 89/185 (48.11%), Query Frame = 3
Query:  147 SNGVPTGLYGFDHLKSPNGFQRFVDDALERSSELVNYISEMPSS-----------VEIIRAMDEISDAVCSVVDSAELCRQTHPDREFVEEASKASMRISEYLHYLNTNHTLYDAVK---KAELDGYLLPKEAHRAANHLRSDFEKGGIHLCADKLDRVNQLNMDIFQLCREFNQNIINDPGHVD 659
            S+G  TGL+    L SP  F       L R+  LV+ I    S+            E++R +D +SD +C V+D AEL R  HPD E+ E A+ A   +  Y++ LNT+  LY  +K     +     L KEA   A     DFEK GIHL   + +R  QL+ +I  L R F Q+I  +    D
Sbjct:   84 SSGPSTGLFEIPSLTSPQNFLVLAQQTLARAQLLVDRIDRAGSADASTAQGIKELKEVVRNLDRLSDLLCGVIDMAELVRNAHPDPEWAEAANAAYEYLCGYMNVLNTHTGLYSVLKNILSIKEVAETLSKEATAVAQVFLRDFEKSGIHLPPAERERFVQLSDEILVLGRGFLQDIAGNDASDD 268          
BLAST of FC877951 vs. ExPASy Swiss-Prot
Match: PMIP_LEUGO (Mitochondrial intermediate peptidase OS=Leucoagaricus gongylophorus GN=OCT1 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.019e-18
Identity = 58/182 (31.87%), Postives = 91/182 (50.00%), Query Frame = 3
Query:  156 VPTGLYGFDHLKSPNGFQRFVDDALERSSELVNYISEMPSS----VEIIRAMDEISDAVCSVVDSAELCRQTHPDREFVEEASKASMRISEYLHYLNTNHTLYDAVKKAELDGYL---LPKEAHRAANHLRSDFEKGGIHLCADKLDRVNQLNMDIFQLCREFNQNIINDPGHVDIFPESRI 680
            + TGL+G   L  PN F    +  L R+  L + I    SS    +++++ +D +SD +CSV+D AEL R  HPDR +         ++ E+++ LNT+  LY+ +K    D  +   L  EA++ A     DFEK  I+L  ++  +   L+ DI  L REF +N         I PE  +
Sbjct:   55 ISTGLFGHSQLSHPNAFISLAEATLVRAQLLTDRILRARSSRDELLKVVKNLDRLSDMLCSVIDLAELIRNAHPDRNWATAGHHVYEQLCEFMNVLNTHVGLYEVLKLVLADASIVKTLSPEAYQTALIFWRDFEKSAINLPPEERQKFVSLSSDILVLGREFLENANAPRPPASIKPEHMV 236          
BLAST of FC877951 vs. ExPASy Swiss-Prot
Match: PMIP_PLEDJ (Mitochondrial intermediate peptidase OS=Pleurotus djamor GN=OCT1 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.943e-18
Identity = 56/162 (34.57%), Postives = 86/162 (53.09%), Query Frame = 3
Query:  165 GLYGFDHLKSPNGFQRFVDDALERSSELVNYISEMPSSVE----IIRAMDEISDAVCSVVDSAELCRQTHPDREFVEEASKASMRISEYLHYLNTNHTLYDAVKKAELDGYL---LPKEAHRAANHLRSDFEKGGIHLCADKLDRVNQLNMDIFQLCREFNQ 629
            GL+G   L+ P+GF    +  L R+  L N I     S +    +++ +D +SD +C V+D AEL R  HPDR +VE A++A   + E+++ LNT+  LYD +K    D  +   +  E +  A     DFEK  I+L  ++  R   L+ +I  L REF Q
Sbjct:   82 GLFGHKELQQPSGFITLAEATLVRAQILTNRILRARESQDELRKVVKNLDRLSDMLCGVIDLAELVRNAHPDRAWVEAANQAYETLCEFMNVLNTDVGLYDVLKAVLSDPTIVQGMGPEEYSTAQIFWHDFEKSAINLPPEQRQRFVSLSSEILVLGREFLQ 243          
BLAST of FC877951 vs. ExPASy Swiss-Prot
Match: MIPEP_RAT (Mitochondrial intermediate peptidase OS=Rattus norvegicus GN=Mipep PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.943e-18
Identity = 62/185 (33.51%), Postives = 87/185 (47.03%), Query Frame = 3
Query:  153 GVPTGLYGFDHLKSPNGFQRFVDDALERSSELVNYISEMPSSVEIIRAMDEISDAVCSVVDSAELCRQTHPDREFVEEASKASMRISEYLHYLNTNHTLYDAVKKAELDGYL---LPKEAHRAANHLRSDFEKGGIHLCADKLDRVNQLNMDIFQLCREFNQNIINDPGHVDIFPESRIPKHIHH 698
            G   GL+G   L +P GFQ   ++AL ++  LV      P   + +   DE+SD +C V D A+  +  HP++ F E A +A   I   +  LNTN  LY +++K   D  L   L  E  R A     DFE  GIHL  +K  R   LN+ I  L   F     N P  +    +  +P+HI H
Sbjct:   58 GERRGLFGVPELSTPEGFQVAQEEALRKTEWLVERACSTPPGPQTVLIFDELSDCLCRVADLADFVKIGHPEQAFREAAQEACRSIGTMVEKLNTNVELYQSLQKLLDDKKLMDSLDAETRRVAELFMFDFEISGIHLDEEKRRRAVDLNVKILDLSSAFLMG-TNFPIKIQ---KHLLPEHIQH 238          
BLAST of FC877951 vs. ExPASy Swiss-Prot
Match: MIPEP_PONAB (Mitochondrial intermediate peptidase OS=Pongo abelii GN=MIPEP PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.784e-18
Identity = 60/183 (32.79%), Postives = 85/183 (46.45%), Query Frame = 3
Query:  153 GVPTGLYGFDHLKSPNGFQRFVDDALERSSELVNYISEMPSSVEIIRAMDEISDAVCSVVDSAELCRQTHPDREFVEEASKASMRISEYLHYLNTNHTLYDAVKKAELDGYL---LPKEAHRAANHLRSDFEKGGIHLCADKLDRVNQLNMDIFQLCREFNQNIINDPGHVDIFPESRIPKHI 692
            G   GL+G   L +P GF    + AL ++  LV      P   + +   DE+SD++C V D A+  +  HP+  F E A +A   I   +  LNTN  LY +++K   D  L   L  E  R A     DFE  GIHL  +K  R   LN+ I  L   F     N P  ++   +  +P+HI
Sbjct:   60 GERRGLFGVPELSAPEGFHAAQEKALRKAELLVGRACSTPPGPQTVLIFDELSDSLCRVADLADFVKIAHPEPAFREAAEEACRSIGTMVEKLNTNVDLYQSLRKLLADKKLVDSLDPETRRVAELFMFDFEISGIHLDKEKRKRAVDLNVKILDLSSTFLMG-ANFPNKIE---KHLLPEHI 238          
BLAST of FC877951 vs. ExPASy Swiss-Prot
Match: MIPEP_HUMAN (Mitochondrial intermediate peptidase OS=Homo sapiens GN=MIPEP PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.498e-17
Identity = 60/183 (32.79%), Postives = 86/183 (46.99%), Query Frame = 3
Query:  153 GVPTGLYGFDHLKSPNGFQRFVDDALERSSELVNYISEMPSSVEIIRAMDEISDAVCSVVDSAELCRQTHPDREFVEEASKASMRISEYLHYLNTNHTLYDAVKKAELDGYL---LPKEAHRAANHLRSDFEKGGIHLCADKLDRVNQLNMDIFQLCREFNQNIINDPGHVDIFPESRIPKHI 692
            G   GL+G   L +P GF    + AL ++  LV+     P   + +   DE+SD++C V D A+  +  HP+  F E A +A   I   +  LNTN  LY +++K   D  L   L  E  R A     DFE  GIHL  +K  R   LN+ I  L   F     N P  ++   +  +P+HI
Sbjct:   60 GERRGLFGVPELSAPEGFHIAQEKALRKTELLVDRACSTPPGPQTVLIFDELSDSLCRVADLADFVKIAHPEPAFREAAEEACRSIGTMVEKLNTNVDLYQSLQKLLADKKLVDSLDPETRRVAELFMFDFEISGIHLDKEKRKRAVDLNVKILDLSSTFLMG-TNFPNKIE---KHLLPEHI 238          
The following BLAST results are available for this feature:
BLAST of FC877951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
PMIP_MALGO1.109e-2037.06Mitochondrial intermediate peptidase OS=Malassezia... [more]
PMIP_KLULA9.384e-2032.40Mitochondrial intermediate peptidase OS=Kluyveromy... [more]
MIPEP_MOUSE6.083e-1934.05Mitochondrial intermediate peptidase OS=Mus muscul... [more]
PMIP_DEBHA1.038e-1834.12Mitochondrial intermediate peptidase OS=Debaryomyc... [more]
PMIP_USTMA1.770e-1834.59Mitochondrial intermediate peptidase OS=Ustilago m... [more]
PMIP_LEUGO3.019e-1831.87Mitochondrial intermediate peptidase OS=Leucoagari... [more]
PMIP_PLEDJ3.943e-1834.57Mitochondrial intermediate peptidase OS=Pleurotus ... [more]
MIPEP_RAT3.943e-1833.51Mitochondrial intermediate peptidase OS=Rattus nor... [more]
MIPEP_PONAB8.784e-1832.79Mitochondrial intermediate peptidase OS=Pongo abel... [more]
MIPEP_HUMAN1.498e-1732.79Mitochondrial intermediate peptidase OS=Homo sapie... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA78AH05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA78AH05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877951 ID=FC877951; Name=FC877951; organism=Citrus clementina; type=EST; length=795bp
TTTTGACGTTCGCACAGCGGCGCCTCCCCCGCACTGCCGCAGCACCAAAT
CAAATGTGGACCCTAATCCGCAGAACCGCTCCTTTCGTCGGTTGCAAATC
GTGTTATTCGGATCATTCCACGACCCGCCATTTCTACACACGGACCTCCA
ACGGAGTCCCTACCGGTCTCTACGGTTTTGACCACTTGAAGTCTCCCAAT
GGCTTTCAACGTTTCGTCGATGACGCCCTCGAGAGGTCCAGTGAATTGGT
TAATTATATATCCGAAATGCCTTCATCTGTGGAAATTATTCGAGCAATGG
ATGAGATTTCAGATGCAGTCTGTTCCGTTGTTGATTCTGCGGAGCTATGT
AGACAAACTCATCCTGACAGAGAATTTGTTGAGGAGGCTAGTAAGGCATC
AATGAGAATCAGTGAATATCTACATTATCTGAATACAAATCATACTCTGT
ATGATGCGGTAAAAAAAGCCGAGCTAGATGGTTATTTGCTTCCTAAGGAA
GCTCATAGGGCTGCTAATCACCTACGTAGTGACTTTGAAAAGGGTGGAAT
TCATCTCTGTGCTGATAAACTAGATCGTGTAAATCAGCTAAATATGGATA
TTTTTCAACTGTGCAGAGAGTTCAATCAAAATATTATAAATGATCCAGGT
CATGTGGATATATTTCCAGAATCACGTATCCCGAAACATATTCACCATCT
CCTTAAGCCTATTTGTCGATTGACATCCGGACCATCAAGGGAATCGTTAA
GATCATGGGATAACAAGAAAGAAAAAGGATTTCGCATAACAACTG
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