FC877988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877988 vs. ExPASy Swiss-Prot
Match: GCN5_ARATH (Histone acetyltransferase GCN5 OS=Arabidopsis thaliana GN=HAG1 PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 1.768e-61 Identity = 124/258 (48.06%), Postives = 146/258 (56.59%), Query Frame = 1 Query: 103 AHSAHLTAPNXXXXXXXXXXXXXXXXXXXXXIHKRKLXXXXXXXX--SEDHAP--HAFPPS-FSADTRDGALTSNDDLESISARGAXXXXXXXXXXXXXXXXXXXXXXXXXX----MRTFTAARLENNNSV-GSARNTKLKTENSTVKIENSDGGKEXXXXXXXXXXXXXXXXXXVLGTAGKEDTVKIFTENIQASGAYSXXXXXXXXXXXXGNLKFVCLSNDGIDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDR 846 +HS+HL A N +HKRKL SEDHAP +FPPS FSADTRDGALTSND+LESISARGA +RTFTAARL++++ V GS+RNTKLKTE+STVK+E+SDGGK+ + G K+++VK+ EN Q SGAY G LKFVC SND IDEHM+ LIGLKNIFARQLPNMPKEYIVRL+MDR Sbjct: 3 SHSSHLNAANRSRSSQTPSPSHSASASVTSSLHKRKLAATTAANAAASEDHAPPSSSFPPSSFSADTRDGALTSNDELESISARGADTDSDPDESEDIVVDDDEDEFAPEQDQDSSIRTFTAARLDSSSGVNGSSRNTKLKTESSTVKLESSDGGKDGGSSVVGTGVSGTVGGSSISGLVPKDESVKVLAENFQTSGAYIAREEALKREEQAGRLKFVCYSNDSIDEHMMCLIGLKNIFARQLPNMPKEYIVRLLMDR 260 HSP 2 Score: 56.6102 bits (135), Expect = 1.768e-61 Identity = 26/32 (81.25%), Postives = 29/32 (90.62%), Query Frame = 3 Query: 846 KHKSVMVIRGNVVVGGITYRPYVSQKFGGDSF 941 KHKSVMV+RGN+VVGGITYRPY SQKFG +F Sbjct: 261 KHKSVMVLRGNLVVGGITYRPYHSQKFGEIAF 292
BLAST of FC877988 vs. ExPASy Swiss-Prot
Match: GCN5_ORYSJ (Histone acetyltransferase GCN5 OS=Oryza sativa subsp. japonica GN=GCN5 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.701e-26 Identity = 72/172 (41.86%), Postives = 89/172 (51.74%), Query Frame = 1 Query: 424 MRTFTAARLENNNSVGSARNTKLKTENSTVKIENSDGGKEXXXXXXXXXXXXXXXXXXVLGTAGKEDTVKIFTENIQASGAYSXXXXXXXXXXXXGNLKFVCLSNDGIDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSTNRLWLSEEMWLLVASHIAHMSVKSLGEIA 939 + TFTAARL+ S R K E+STV + GKED +FT+NIQ SGAYS G LKF+C SNDG+DEHM+WL+GLKNIFARQLPNMPKEYIVRLVMDR+ + + ++ + + GEIA Sbjct: 75 LHTFTAARLDGAPPSSSGRPPK--PESSTVSAAAAAAAAAAAPKPDSASAAAGD---------GKEDPKGLFTDNIQTSGAYSAREEGLKREEEAGRLKFLCYSNDGVDEHMIWLVGLKNIFARQLPNMPKEYIVRLVMDRTHKSMMVIRNNIVVGGITYRPYTSQKFGEIA 235
BLAST of FC877988 vs. ExPASy Swiss-Prot
Match: GCN5_YEAST (Histone acetyltransferase GCN5 OS=Saccharomyces cerevisiae GN=GCN5 PE=1 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 2.964e-11 Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 1 Query: 709 GNLKFVCLSNDGIDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRS 849 G ++F ++ND E+M+ L GLKNIF +QLP MPKEYI RLV DRS Sbjct: 98 GKIEFRVVNNDNTKENMMVLTGLKNIFQKQLPKMPKEYIARLVYDRS 144 HSP 2 Score: 29.261 bits (64), Expect = 2.964e-11 Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = 3 Query: 849 HKSVMVIRGNV-VVGGITYRPYVSQKF 926 H S+ VIR + VVGGITYRP+ ++F Sbjct: 145 HLSMAVIRKPLTVVGGITYRPFDKREF 171
BLAST of FC877988 vs. ExPASy Swiss-Prot
Match: GCN5_CANGA (Histone acetyltransferase GCN5 OS=Candida glabrata GN=GCN5 PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 3.823e-11 Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 1 Query: 709 GNLKFVCLSNDGIDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRS 849 G ++F +SND E+M+ L GLKNIF +QLP MPKEYI RLV DRS Sbjct: 205 GKIEFRVVSNDNTRENMMVLTGLKNIFQKQLPKMPKEYIARLVYDRS 251 HSP 2 Score: 28.1054 bits (61), Expect = 3.823e-11 Identity = 14/27 (51.85%), Postives = 20/27 (74.07%), Query Frame = 3 Query: 849 HKSVMVIRGNV-VVGGITYRPYVSQKF 926 H S+ VIR + VVGGITY+P+ ++F Sbjct: 252 HLSMAVIRKPLTVVGGITYKPFNKRQF 278
BLAST of FC877988 vs. ExPASy Swiss-Prot
Match: GCN5_KLULA (Histone acetyltransferase GCN5 OS=Kluyveromyces lactis GN=GCN5 PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 4.970e-11 Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 1 Query: 709 GNLKFVCLSNDGIDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRS 849 G ++F ++ND E+M+ L GLKNIF +QLP MPKEYI RLV DRS Sbjct: 175 GKIEFRVVNNDNSKENMMVLTGLKNIFQKQLPKMPKEYIARLVYDRS 221 HSP 2 Score: 28.8758 bits (63), Expect = 4.970e-11 Identity = 14/27 (51.85%), Postives = 20/27 (74.07%), Query Frame = 3 Query: 849 HKSVMVIRGNV-VVGGITYRPYVSQKF 926 H S+ V+R + VVGGITYRP+ ++F Sbjct: 222 HLSMAVVRKPLTVVGGITYRPFDKREF 248
BLAST of FC877988 vs. ExPASy Swiss-Prot
Match: GCN5_ASHGO (Histone acetyltransferase GCN5 OS=Ashbya gossypii GN=GCN5 PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 6.476e-11 Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 1 Query: 709 GNLKFVCLSNDGIDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRS 849 G ++F ++ND E+M+ L GLKNIF +QLP MPKEYI RLV DRS Sbjct: 111 GKIEFRVVNNDNTRENMMVLTGLKNIFQKQLPKMPKEYIARLVYDRS 157 HSP 2 Score: 28.4906 bits (62), Expect = 6.476e-11 Identity = 15/27 (55.56%), Postives = 19/27 (70.37%), Query Frame = 3 Query: 849 HKSVMVIRGNV-VVGGITYRPYVSQKF 926 H S+ VIR + VVGGITYRP+ +F Sbjct: 158 HLSMAVIRKPLTVVGGITYRPFEKGEF 184 The following BLAST results are available for this feature:
BLAST of FC877988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877988 ID=FC877988; Name=FC877988; organism=Citrus clementina; type=EST; length=941bpback to top |