FC877989

Overview
NameFC877989
Unique NameFC877989
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length905
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6986 contig Ccv1_Contig6986:1..905. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: AMDS_EMENI (Acetamidase OS=Emericella nidulans GN=amdS PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 8.219e-58
Identity = 120/257 (46.69%), Postives = 170/257 (66.15%), Query Frame = 3
Query:  114 TWDKLVALKQKQIAEDIPLEWRLPSSLVEKYRKPGVNLIASDVLKHAGILSSVELQITETNSATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRVPY 884
            +W++L A K+ ++A+ IP EW++ +   E            D  K +GILS  EL+ITE  SA ++  +L  GEL+S+ VT AF KRAAIAQQLT+C  E     AL +A+ LDEY   H +PVGPLHGLPIS+KD  +VKG +T+ G++ ++ +     +S L  +L + GAV YVKT++PQT+M  ++ NNI GRT+NP N + + GGSSGGEGA+V  +G  +GVGTD+ GSIR+P+     YG +P+  R+PY
Sbjct:    4 SWEELAADKRARLAKTIPDEWKVQTLPAEDS--------VIDFPKKSGILSEAELKITEA-SAADLVSKLAAGELTSVEVTLAFCKRAAIAQQLTNCAHEFFPDAALAQARELDEYYAKHKRPVGPLHGLPISLKDQLRVKGYETSMGYISWL-NKYDEGDSVLTTMLRKAGAVFYVKTSVPQTLMVCETVNNIIGRTVNPRNKNWSCGGSSGGEGAIVGIRGGVIGVGTDIGGSIRVPAAFNFLYGLRPSHGRLPY 250          
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: AMDS_ASPOR (Acetamidase OS=Aspergillus oryzae GN=amdS PE=3 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 2.024e-56
Identity = 116/258 (44.96%), Postives = 165/258 (63.95%), Query Frame = 3
Query:  114 TWDKLVALKQKQIAEDIPLEWRLPSSLVEKYRKPGVNLIASDVLKHAGILSSVELQITETNSATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRVPYG 887
            +W+ L A K+ ++ + IP EW+  S  +E            D+ + +GILS  E++IT + SATE+  QL  G L S+ VT AF KRAA+A QL +C  +     AL +A+ LD Y E H KPVGPLHGLPIS+KD  +VKG +T   ++ ++     T +S L  +L + GAV  VKT++PQT+M  ++ NNI GRT NP N +L+ GGSSGGEGA++A +G  +G+GTD+ GSIR+P+     YG +P+  R+PYG
Sbjct:    5 SWEDLAADKRARLEKSIPDEWKFKSVPIEGS--------VIDLPEKSGILSPSEIKITNS-SATELVAQLANGTLKSVDVTLAFCKRAALAHQLVNCAHDFFPELALAQARELDRYFETHKKPVGPLHGLPISLKDQLRVKGTETCMAYISWLGK-RDTSDSILTALLRKAGAVFLVKTSVPQTLMVCETVNNIIGRTSNPRNLNLSCGGSSGGEGAMIAMRGGAIGIGTDIGGSIRVPAAFNSLYGIRPSHGRLPYG 252          
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: YP23_SCHPO (Putative amidase PB8B6.03 OS=Schizosaccharomyces pombe GN=SPBPB8B6.03 PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 2.029e-48
Identity = 104/260 (40.00%), Postives = 148/260 (56.92%), Query Frame = 3
Query:  105 DTDTWDKLVALKQKQIAEDIPLEWRLPSSLVEKYRKPGVNLIASDVLKHAGILSSVELQITETNSATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRVPY 884
            DT TW+ + ALK+ Q+   IP EWR P+   E      VN       ++  ++   E       S  E+A  +  G  +S  VT AF  RAA+A Q+ +C  E  F +AL++AK LD+  +   K VGP HG+PIS+KD   + GK ++ G+V  +  P  TE + L +IL + GA+ YVKT +P  MM   + +N+ G T N  N +L++GGSSGGEGAL+    S  G+GTD+ GSIRIPS   G Y  +P+  R+ Y
Sbjct:    2 DTPTWEVVAALKRNQVLNSIPKEWRKPNIRKEMISSGYVN-----TYEYLNLILPPEENAITNLSMLELATNIAKGNYTSYNVTKAFCHRAALAHQILNCCIEIFFDEALKKAKELDDVFQKTSKVVGPFHGIPISLKDQVDLPGKDSSIGYVSLVGKPK-TEIALLAKILQDKGAIFYVKTTVPMAMMAPQTVSNLHGYTYNALNINLSSGGSSGGEGALLGSGASCCGIGTDIGGSIRIPSCFQGLYALKPSTGRISY 255          
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: AMDY_YEAST (Probable amidase OS=Saccharomyces cerevisiae GN=AMD2 PE=1 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 2.480e-46
Identity = 109/260 (41.92%), Postives = 155/260 (59.62%), Query Frame = 3
Query:  114 TWDKLVALKQKQIAEDIPLEWRLPSSLVEKYRKPGVNLIASDVLKHAGILSSVELQITETNSATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKP--VGPLHGLPISIKDCFQVKGKQTTAGFV-EFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRVPY 884
            TW + V LK+ Q+   I  EW+L S+ + + +    NLI +       + SS E QIT + +   + + L+  ELS   +T AF  RAA+  Q+ +CL+E MFS+AL  A Y D       +P  + PL+G+PIS+KD   V+G  T+ G++    K     E S +V  L +LGA+I+VKT +P +MM  D+ +N FG T N  N S ++GGSSGGEG+L+   GS LG+GTD+ GSIRIPS   G +G +PT  RVPY
Sbjct:    6 TWKEKVQLKKDQLNSKIKDEWKLNSTTITRLKNDKKNLIKNI----DDLCSSSENQITHS-TIMALRQALEAKELSCHEITAAFCHRAALIHQVVNCLSEIMFSEALRLADYYDS-----NRPAILPPLYGIPISLKDQCNVEGVDTSLGYLCRTFKPKTKNEESLIVSFLRDLGAIIFVKTTVPSSMMATDTQSNTFGYTYNSINLSFSSGGSSGGEGSLIGAHGSLLGLGTDIGGSIRIPSSYQGLFGLKPTFGRVPY 255          
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: YJV7_SCHPO (Putative amidase C550.07 OS=Schizosaccharomyces pombe GN=SPCC550.07 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.468e-43
Identity = 92/218 (42.20%), Postives = 137/218 (62.84%), Query Frame = 3
Query:  225 LIASDVLKHAGILSSVELQITETNSATEIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878
            L  + +    G+L+  E+++TE   AT +A  +K  +++S+ + TAF KRAAIAQQL +C+ E  + +AL RA  LDEY    G  VGPLHG+P+S+K+   +K    TA F+    +  A ++S LV  + + GAV Y +T  PQ +M  ++ +N+ G T+NP N  LT GGSSGGEGAL+  K S LG+G+D+ GSIR P+   G +G +P+  R+
Sbjct:   35 LNVTKIPSECGLLTPKEIELTEKYDATALAEMIKDRKVTSVELVTAFCKRAAIAQQLVNCVNELFYEEALARAAELDEYYAKTGSLVGPLHGVPVSVKEHISIKNHTATASFLA-KANIIAEKDSDLVATVRKAGAVFYCRTPQPQAIMHLETSSNLTGVTVNPFNRKLTPGGSSGGEGALLGIKASVLGIGSDIGGSIRSPAANNGLFGLRPSTLRL 251          
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: VDHAP_CHICK (Vitamin D3 hydroxylase-associated protein OS=Gallus gallus PE=1 SV=3)

HSP 1 Score: 145.976 bits (367), Expect = 2.845e-34
Identity = 83/191 (43.46%), Postives = 117/191 (61.26%), Query Frame = 3
Query:  306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878
            E+A +LK G LS  +V  ++  +A    +  +C+ + +     +  K   +      K  G L+G+P+SIKD    KG  ++AG V+F+      E+S +V++L   GA+ +VKTNIPQTM+  D  N IFG+TLNP N   T GGSSGGEGAL+A  GS LG+G+DVAGSIR+PS  CG  G +PT  R+
Sbjct:   86 ELAEKLKEGSLSPESVLYSYMGKALEVNREVNCVIDFIHGCEDQLQKVKQQ------KEKGLLYGIPVSIKDHIDCKGHVSSAGLVKFLGQ-VKEEDSVIVQVLKSQGAIPFVKTNIPQTMINYDCSNLIFGQTLNPLNHQKTPGGSSGGEGALIAGGGSLLGIGSDVAGSIRLPSSFCGLCGLKPTGFRI 269          
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: FAAH1_RAT (Fatty-acid amide hydrolase 1 OS=Rattus norvegicus GN=Faah PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.007e-33
Identity = 80/198 (40.40%), Postives = 120/198 (60.61%), Query Frame = 3
Query:  306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLT------ETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLEL-GAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878
            ++ ++L++GELS  AV   +  +A    + T+C+T      ET  SQA  +               G L+G+P+S+K+CF  KG  +T G    +     +E+ C+V  +L+L GAV +V TN+PQ+M++ D  N +FG+T+NP  +S + GGSSGGEGAL+   GSPLG+GTD+ GSIR PS  CG  G +PT +R+
Sbjct:   81 QLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQ---------------GLLYGVPVSLKECFSYKGHDSTLGLS--LNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMLSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGNRL 261          
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: FAAH1_MOUSE (Fatty-acid amide hydrolase 1 OS=Mus musculus GN=Faah PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.007e-33
Identity = 80/198 (40.40%), Postives = 119/198 (60.10%), Query Frame = 3
Query:  306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLT------ETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLEL-GAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878
            ++ ++L++GELS  AV   +  +A    + T+C+T      ET  SQA  +               G L+G+P+S+K+CF  KG  +T G    +     +E+ C+V  +L+L GAV +V TN+PQ+M++ D  N +FG+T+NP   S + GGSSGGEGAL+   GSPLG+GTD+ GSIR PS  CG  G +PT +R+
Sbjct:   81 QLVQKLQSGELSPEAVLFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQ---------------GLLYGVPVSLKECFSYKGHASTLGLS--LNEGVTSESDCVVVQVLKLQGAVPFVHTNVPQSMLSYDCSNPLFGQTMNPWKPSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGNRL 261          
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: FAAH1_PIG (Fatty-acid amide hydrolase 1 OS=Sus scrofa GN=FAAH PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.931e-32
Identity = 79/192 (41.15%), Postives = 120/192 (62.50%), Query Frame = 3
Query:  306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLTETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLEL-GAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878
            ++ +++++GELS  AV  ++ ++A    + T+C+T  +       A    +  +  G+  G L+G+P+S+K+CF  KG  +T G       PA  E  C+V  +L+L GAV +V TN+PQ+M + D  N +FG+T NP  +S + GGSSGGEGAL+A  GSPLG+GTD+ GSIR PS  CG  G +PT +R+
Sbjct:   81 QLVQKVRSGELSPEAVLFSYLQKAWEVNRGTNCVTTYL-------ADCEAQLCQAPGQ--GLLYGVPVSLKECFSCKGHDSTLGLSRNQGTPA--ECDCVVVQVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTTNPWMSSKSPGGSSGGEGALIAAGGSPLGLGTDIGGSIRFPSAFCGICGIKPTGNRI 261          
BLAST of FC877989 vs. ExPASy Swiss-Prot
Match: FAAH1_HUMAN (Fatty-acid amide hydrolase 1 OS=Homo sapiens GN=FAAH PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.461e-30
Identity = 78/197 (39.59%), Postives = 115/197 (58.38%), Query Frame = 3
Query:  306 EIARQLKTGELSSLAVTTAFAKRAAIAQQLTSCLT------ETMFSQALERAKYLDEYLELHGKPVGPLHGLPISIKDCFQVKGKQTTAGFVEFIKHPAATENSCLVEILLELGAVIYVKTNIPQTMMTGDSDNNIFGRTLNPHNTSLTAGGSSGGEGALVAFKGSPLGVGTDVAGSIRIPSLCCGTYGFQPTADRV 878
            ++ ++L + EL+  AV   +  +A    + T+C+T      ET  SQA  +               G L+G+P+S+K+CF  KG+ +T G       PA  + S +V +L   GAV +V TN+PQ+M + D  N +FG+T+NP  +S + GGSSGGEGAL+   GSPLG+GTD+ GSIR PS  CG  G +PT +R+
Sbjct:   81 QLVQKLHSRELAPEAVLFTYVGKAWEVNKGTNCVTSYLADCETQLSQAPRQ---------------GLLYGVPVSLKECFTYKGQDSTLGLSLNEGVPAECD-SVVVHVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTVNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSSFCGICGLKPTGNRL 261          
The following BLAST results are available for this feature:
BLAST of FC877989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AMDS_EMENI8.219e-5846.69Acetamidase OS=Emericella nidulans GN=amdS PE=2 SV... [more]
AMDS_ASPOR2.024e-5644.96Acetamidase OS=Aspergillus oryzae GN=amdS PE=3 SV=... [more]
YP23_SCHPO2.029e-4840.00Putative amidase PB8B6.03 OS=Schizosaccharomyces p... [more]
AMDY_YEAST2.480e-4641.92Probable amidase OS=Saccharomyces cerevisiae GN=AM... [more]
YJV7_SCHPO7.468e-4342.20Putative amidase C550.07 OS=Schizosaccharomyces po... [more]
VDHAP_CHICK2.845e-3443.46Vitamin D3 hydroxylase-associated protein OS=Gallu... [more]
FAAH1_RAT7.007e-3340.40Fatty-acid amide hydrolase 1 OS=Rattus norvegicus ... [more]
FAAH1_MOUSE7.007e-3340.40Fatty-acid amide hydrolase 1 OS=Mus musculus GN=Fa... [more]
FAAH1_PIG5.931e-3241.15Fatty-acid amide hydrolase 1 OS=Sus scrofa GN=FAAH... [more]
FAAH1_HUMAN1.461e-3039.59Fatty-acid amide hydrolase 1 OS=Homo sapiens GN=FA... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA73AG03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA73AG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877989 ID=FC877989; Name=FC877989; organism=Citrus clementina; type=EST; length=905bp
TCTCCAGTATTCGTTACAACTTCTGAGCTCTCCTGACGATCCCACGTCCC
CGTTTACCCGCACGAATAGCAAGCGATCATTTACAAAACGCAATGCACGG
AAGCGACACCGACACGTGGGATAAGCTTGTAGCACTGAAACAGAAGCAGA
TCGCTGAGGATATCCCACTGGAATGGCGCTTGCCATCGTCTCTGGTCGAA
AAATATCGCAAGCCCGGCGTCAATCTCATTGCAAGTGACGTCTTGAAACA
TGCTGGTATCTTGTCGAGTGTCGAGCTGCAGATCACCGAGACCAACTCAG
CGACGGAGATAGCTCGCCAGCTGAAGACAGGCGAGTTGAGTTCGCTTGCA
GTCACAACCGCTTTCGCGAAGCGGGCGGCAATTGCTCAACAATTGACATC
ATGCTTGACAGAAACCATGTTTTCGCAAGCTCTAGAACGAGCCAAGTATC
TCGATGAGTACCTAGAGCTTCACGGCAAACCCGTGGGTCCTCTACATGGC
TTGCCCATTAGTATCAAAGACTGTTTCCAGGTGAAAGGCAAGCAGACGAC
GGCCGGCTTTGTCGAGTTCATCAAGCATCCAGCAGCAACTGAAAACTCAT
GTCTCGTGGAGATCCTTTTGGAGCTTGGTGCAGTGATCTACGTCAAGACT
AACATTCCTCAAACTATGATGACTGGTGACTCGGACAACAATATTTTTGG
ACGCACACTAAACCCGCACAACACAAGCCTGACTGCTGGCGGCTCCAGCG
GCGGAGAAGGAGCACTGGTTGCTTTCAAAGGTTCTCCGCTCGGCGTAGGC
ACAGATGTGGCAGGTTCCATCCGCATACCCTCGTTGTGCTGCGGAACATA
TGGCTTTCAACCGACCGCGGACCGCGTGCCCTACGGGTGGCAGATAACTG
GCGAC
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