FC878001
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878001 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.779e-49 Identity = 100/253 (39.53%), Postives = 141/253 (55.73%), Query Frame = 3 Query: 30 GFVDHQGRPIDRLNSGGWRAASFIIGVEVAERFAYYGISSNLITYLTGQLGESTATAAAAVNVWSGTASLLPLLGAFLADSFLGRFRTIVVASLIYILGXXXXXXXXXXXXXXXXDCQNNNTAKSCSPHHFQIIVFIFSLYLVAIGQGGHKPCTQAFGADQFDAQNPQERRAKSSFFNWWYFGISFGANSTILVVIYIQDNLNWALGFGIPCXXXXXXXXXXXXGTKTYRFSIKSKQRNPFARIGRVFVVAIK 788 G VD P ++ +G W+A FI+G E ER AYYG+ +NL+ YL +L + ATAA V WSGT + PL+GAF+AD++LGR+ TI IY+ G +C A +C P+ Q VF +LY++A+G GG KPC +FGADQFD + E+ KSSFFNW+YF I+ GA V+++IQ N+ W GFG+P G++ YR ++ +P RI +V V A + Sbjct: 11 GTVDIHKNPANKEKTGNWKACRFILGNECCERLAYYGMGTNLVNYLESRLNQGNATAANNVTNWSGTCYITPLIGAFIADAYLGRYWTIATFVFIYVSGMTLLTLSASVPGLKPGNCN----ADTCHPNSSQTAVFFVALYMIALGTGGIKPCVSSFGADQFDENDENEKIKKSSFFNWFYFSINVGALIAATVLVWIQMNVGWGWGFGVPTVAMVIAVCFFFFGSRFYR--LQRPGGSPLTRIFQVIVAAFR 257
BLAST of FC878001 vs. ExPASy Swiss-Prot
Match: PTR3B_ARATH (Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 6.446e-49 Identity = 99/262 (37.79%), Postives = 145/262 (55.34%), Query Frame = 3 Query: 30 GFVDHQGRPIDRLNSGGWRAASFIIGVEVAERFAYYGISSNLITYLTGQLGESTATAAAAVNVWSGTASLLPLLGAFLADSFLGRFRTIVVASLIYILGXXXXXXXXXXXXXXXXDCQNNNTAKSCSPHHFQIIVFIFSLYLVAIGQGGHKPCTQAFGADQFDAQNPQERRAKSSFFNWWYFGISFGANSTILVVIYIQDNLNWALGFGIPCXXXXXXXXXXXXGTKTYRFSIKSKQRNPFARIGRVFVVAIKTRKATLASE 815 G VD +G + R +G W+A SF++ EV ER AYYGISSNL+ Y+T +L + T ++ V W GT+ L P+LGA++AD+ GR+ T V++S IY+LG C N Q+ VF +LY +AIG GG KP GADQFD +P+++ K SFFNWW F I FG V++Y+QDN+ WA+G+G+ GT+ YR K +PF ++ RV V +++ + ++S+ Sbjct: 14 GTVDLRGNRVRRSQTGRWKACSFVVVYEVFERMAYYGISSNLVIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVADAHFGRYITFVISSAIYLLGMALLTLSVSLPGLKPPKCSTANVENCEKASVIQLAVFFGALYTLAIGTGGTKPNISTIGADQFDEFDPKDKIHKHSFFNWWMFSIFFGTFFATTVLVYVQDNVGWAIGYGLSTLGLAFSIFIFLLGTRLYRH--KLPMGSPFTKMARVIVASLRKAREPMSSD 273
BLAST of FC878001 vs. ExPASy Swiss-Prot
Match: PTR3A_ARATH (Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 8.419e-49 Identity = 100/262 (38.17%), Postives = 139/262 (53.05%), Query Frame = 3 Query: 30 GFVDHQGRPIDRLNSGGWRAASFIIGVEVAERFAYYGISSNLITYLTGQLGESTATAAAAVNVWSGTASLLPLLGAFLADSFLGRFRTIVVASLIYILGXXXXXXXXXXXXXXXXDCQNNNTAKSCSPHHFQIIVFIFSLYLVAIGQGGHKPCTQAFGADQFDAQNPQERRAKSSFFNWWYFGISFGANSTILVVIYIQDNLNWALGFGIPCXXXXXXXXXXXXGTKTYRFSIKSKQRNPFARIGRVFVVAIKTRKATLASE 815 G VD QG P+ R G W+A SF++ EV ER AYYGISSNL Y+T +L + T ++ V W GT+ L P+LGA++ D+ LGR+ T V++ IY G +C N Q+ VF +LY +AIG GG KP GADQFD +P+E+ K SFFNWW F I FG V++Y+QDN+ W LG+G+P GT YR + + +PF ++ RV V + + A + + Sbjct: 14 GTVDLQGNPVRRSIRGRWKACSFVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFSGMMVLTLSVTIPGIKPPECSTTNVENCEKASVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQKLSFFNWWMFSIFFGTLFANTVLVYVQDNVGWTLGYGLPTLGLAISITIFLLGTPFYRHKLPT--GSPFTKMARVIVASFRKANAPMTHD 273
BLAST of FC878001 vs. ExPASy Swiss-Prot
Match: PTR2_ARATH (Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 4.178e-48 Identity = 109/278 (39.21%), Postives = 152/278 (54.68%), Query Frame = 3 Query: 30 GFVDHQGRPIDRLNSGGWRAASFIIGVEVAERFAYYGISSNLITYLTGQLGESTATAAAAVNVWSGTASLLPLLGAFLADSFLGRFRTIVVASLIYILGXXXXXXXXXXXXXXXXDCQNNNTAKSCSPHHFQIIVFIFSLYLVAIGQGGHKPCTQAFGADQFDAQNPQERRAKSSFFNWWYFGISFGANSTILVVIYIQDNLNWALGFGIPCXXXXXXXXXXXXGTKTYRFSIKSKQRNPFARIGRVFVVAIKTRKATLASEDEAQSSQQFEFLNKAL 863 G VD G P + +G W+A FI+G E ER AYYGI+ NLITYLT +L + +AA V W GT L PL+GA LAD++ GR+ TI S IY +G +C + S +P Q +F LYL+A+G GG KPC +FGADQFD + +ER K+SFFNW+YF I+ GA + ++++IQ+N W LGFGIP GT YRF + +P RI +V V + RK+++ ++A + + N A+ Sbjct: 28 GSVDFNGNPPLKEKTGNWKACPFILGNECCERLAYYGIAGNLITYLTTKLHQGNVSAATNVTTWQGTCYLTPLIGAVLADAYWGRYWTIACFSGIYFIGMSALTLSASVPALKPAECIGD-FCPSATPA--QYAMFFGGLYLIALGTGGIKPCVSSFGADQFDDTDSRERVRKASFFNWFYFSINIGALVSSSLLVWIQENRGWGLGFGIPTVFMGLAIASFFFGTPLYRF--QKPGGSPITRISQVVVASF--RKSSVKVPEDATLLYETQDKNSAI 298
BLAST of FC878001 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.065e-43 Identity = 96/265 (36.23%), Postives = 145/265 (54.72%), Query Frame = 3 Query: 30 GFVDHQGRPIDRLNSGGWRAASFIIGVEVAERFAYYGISSNLITYLTGQLGESTATAAAAVNVWSGTASLLPLLGAFLADSFLGRFRTIVVASLIYILGXXXXXXXXXXXXXXXXDCQNNNTAKSCSPHHFQIIVFIFSLYLVAIGQGGHKPCTQAFGADQFDAQNPQERRAKSSFFNWWYFGISFGANSTILVVIYIQDNLNWALGFGIPCXXXXXXXXXXXXGTKTYRFSIKSKQRNPFARIGRVFVVAIKTRKATLASEDEA 824 G +D +P ++ +G W+A FI+G E ER AYYG+S+NLI YL Q+ +A+ +V+ WSGT PL+GAF+AD++LGR+ TI +IYI G + ++C Q + +LYL+A+G GG KPC +FGADQFD + +E+ +KSSFFNW+YF I+ GA V+++IQ N+ W G G+P G+ YR ++ +P R+ +V V + + K + EDE+ Sbjct: 12 GTLDIHKKPANKNKTGTWKACRFILGTECCERLAYYGMSTNLINYLEKQMNMENVSASKSVSNWSGTCYATPLIGAFIADAYLGRYWTIASFVVIYIAGMTLLTISASVPGLTP-----TCSGETCHATAGQTAITFIALYLIALGTGGIKPCVSSFGADQFDDTDEKEKESKSSFFNWFYFVINVGAMIASSVLVWIQMNVGWGWGLGVPTVAMAIAVVFFFAGSNFYR--LQKPGGSPLTRMLQVIVASCRKSKVKI-PEDES 268
BLAST of FC878001 vs. ExPASy Swiss-Prot
Match: CHL1_ARATH (Nitrate/chlorate transporter OS=Arabidopsis thaliana GN=CHL1 PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.591e-39 Identity = 92/259 (35.52%), Postives = 132/259 (50.97%), Query Frame = 3 Query: 39 DHQGRPIDRLNSGGWRAASFIIGVEVAERFAYYGISSNLITYLTGQLGESTATAAAAVNVWSGTASLLPLLGAFLADSFLGRFRTIVVASLIYILGXXXXXXXXXXXXXXXXDCQNNNTAKSCSPHHFQIIVFIFSLYLVAIGQGGHKPCTQAFGADQFDAQNPQERRAKSSFFNWWYFGISFGANSTILVVIYIQDNLNWALGFGIPCXXXXXXXXXXXXGTKTYRFSIKSKQRNPFARIGRVFVVAIKTRKATLASE 815 D QGRP DR +GGW +A+ I+ +E ER GI NL+TYLTG + ATAA V + GT+ +L LLG F+AD+FLGR+ TI + + I G C ++ Q+ V +LYL A+G GG K FG+DQFD P+ER + FFN ++F I+ G+ + V++Y+QD++ G+GI GT YRF K +P ++ V V A + RK L ++ Sbjct: 17 DFQGRPADRSKTGGWASAAMILCIEAVERLTTLGIGVNLVTYLTGTMHLGNATAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFAAIQATGVSILTLSTIIPGLRPPRCNPTTSSHCEQASGIQLTVLYLALYLTALGTGGVKASVSGFGSDQFDETEPKERSKMTYFFNRFFFCINVGSLLAVTVLVYVQDDVGRKWGYGICAFAIVLALSVFLAGTNRYRF--KKLIGSPMTQVAAVIVAAWRNRKLELPAD 273
BLAST of FC878001 vs. ExPASy Swiss-Prot
Match: PTR2X_ARATH (Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.214e-32 Identity = 86/277 (31.05%), Postives = 124/277 (44.77%), Query Frame = 3 Query: 75 GGWRAASFIIGVEVAERFAYYGISSNLITYLTGQLGESTATAAAAVNVWSGTASLLPLLGAFLADSFLGRFRTIVVASLIYILGXXXXXXXXXXXXXXXXDCQNNNTAKSCSPHHFQIIVFIFSLY-LVAIGQGGHKPCTQAFGADQFD-AQNPQERRAKSSFFNWWYFGISFGANSTILVVIYIQDNLNWALGFGIPCXXXXXXXXXXXXGTKTYRFSIKSKQRNPFARIGRVFVVAIKTRKATLASEDEA-------------QSSQQFEFLNKA 860 GG FII E E+ A YG+ N+I YL A + +WS ++ PLLGAFL+DS+LGRF TI +ASL LG C C + ++S + L++IG GG +PC+ AFGADQ D +NP+ R SFF W+Y + ++YIQ++L W +GFG+P + Y + ++ F + + V A K RK +L ++ SQ+ FLNKA Sbjct: 23 GGIITMPFIIANEAFEKVASYGLLPNMIMYLIRDYRFGVAKGTNVLFMWSAASNFTPLLGAFLSDSYLGRFLTISIASLSSFLGMVLLWLTAMLPQVKPSPCDPTAAGSHCGSSTASQLALLYSAFALISIGSGGIRPCSLAFGADQLDNKENPKNERVLESFFGWYYASSAVAVLIAFTGIVYIQEHLGWKIGFGVPAVLMLIAALLFILASPLY--VTRGVTKSLFTGLAQAIVAAYKKRKLSLPDHHDSFDCYYHMKDSEIKAPSQKLRFLNKA 297
BLAST of FC878001 vs. ExPASy Swiss-Prot
Match: PEPT1_DROME (Peptide transporter family 1 OS=Drosophila melanogaster GN=yin PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 5.687e-21 Identity = 66/219 (30.14%), Postives = 102/219 (46.58%), Query Frame = 3 Query: 84 RAASFIIGVEVAERFAYYGISSNLITYLTGQLGESTATAAAAVNVWSGTASLLPLLGAFLADSFLGRFRTIVVASLIYILGXXXXXXXXXXXXXXXXDCQNNNTAKSCSPHHFQIIVFIFSLYLVAIGQGGHKPCTQAFGADQFDAQNPQERRAKSSFFNWWYFGISFGA--NSTILVVIYIQ-----DNLNWALGFGIPCXXXXXXXXXXXXGTKTYR 719 ++ +FII E ERF YYG+ + L+ YLT +LG + TA + ++ + PL+GA +AD +LG+++TI+ SL+Y LG V + L L+AIG GG KPC AFG DQF P + + FF+ +YF I+ G+ ++T ++ D ++L FG+P G + YR Sbjct: 34 KSVAFIISNEFCERFNYYGMRTILVLYLTNKLGYNEETATVLFHTFTMLVYIFPLIGALIADGWLGKYKTILYLSLVYSLGAMVVSFGAVPLSGMPTKA-----------------VTVVGLLLIAIGTGGIKPCVSAFGGDQFSL--PAQSFQLAKFFSLFYFAINAGSLISTTFTPILRADVHCFGDQDCFSLAFGVPAILMIFSVIIFMAGKRLYR 233
BLAST of FC878001 vs. ExPASy Swiss-Prot
Match: S15A1_HUMAN (Solute carrier family 15 member 1 OS=Homo sapiens GN=SLC15A1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.427e-21 Identity = 72/242 (29.75%), Postives = 116/242 (47.93%), Query Frame = 3 Query: 96 FIIGVEVAERFAYYGISSNLITYLTGQLGESTATAAAAVNVWSGTASLLPLLGAFLADSFLGRFRTIVVASLIYILGXXXXXXXXXXXXXXXXDCQNNNTAKSCSPHHFQIIVFIFSLYLVAIGQGGHKPCTQAFGADQFDAQNPQERRAKSSFFNWWYFGISFGA--NSTILVVIYIQD------NLNWALGFGIPCXXXXXXXXXXXXGTKTYRFSIKSK-QRNPFARIGRVFVVAIKTR 794 FI+ E ERF+YYG+ + LI Y T + + A + + L P+LGA +ADS+LG+F+TIV S++Y +G D ++ T S H +++ + L L+A+G GG KPC AFG DQF+ ++R + FF+ +Y I+ G+ ++ I ++ +Q + L FG+P G+ Y+ K K Q N ++ + AIK R Sbjct: 18 FIVVNEFCERFSYYGMRAILILYFTNFISWDDNLSTAIYHTFVALCYLTPILGALIADSWLGKFKTIVSLSIVYTIG---QAVTSVSSINDLTDHNHDGTPDSLPVH---VVLSLIGLALIALGTGGIKPCVSAFGGDQFEEGQEKQR---NRFFSIFYLAINAGSLLSTIITPMLRVQQCGIHSKQACYPLAFGVPAALMAVALIVFVLGSGMYK---KFKPQGNIMGKVAKCIGFAIKNR 247
BLAST of FC878001 vs. ExPASy Swiss-Prot
Match: S15A1_MOUSE (Solute carrier family 15 member 1 OS=Mus musculus GN=Slc15a1 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.161e-20 Identity = 70/241 (29.05%), Postives = 113/241 (46.89%), Query Frame = 3 Query: 96 FIIGVEVAERFAYYGISSNLITYLTGQLGESTATAAAAVNVWSGTASLLPLLGAFLADSFLGRFRTIVVASLIYILGXXXXXXXXXXXXXXXXDCQNNNTAKSCSPHHFQIIVFIFSLYLVAIGQGGHKPCTQAFGADQFDAQNPQERRAKSSFFNWWYFGISFGA--NSTILVVIYIQ------DNLNWALGFGIPCXXXXXXXXXXXXGTKTYRFSIKSKQRNPFARIGRVFVVAIKTR 794 FI+ E ERF+YYG+ + L+ Y LG + A + + L P+LGA +ADS+LG+F+TIV S++Y +G D +N + S H + + + L L+A+G GG KPC AFG DQF+ ++R + FF+ +Y I+ G+ ++ I ++ +Q + L FG+P G+ Y+ Q N ++ + AIK R Sbjct: 18 FIVVNEFCERFSYYGMRALLVLYFRNFLGWDDNLSTAIYHTFVALCYLTPILGALIADSWLGKFKTIVSLSIVYTIG---QAVISVSSINDLTDHDHNGSPDSLPVH---VALSMVGLALIALGTGGIKPCVSAFGGDQFEEGQEKQR---NRFFSIFYLAINGGSLLSTIITPILRVQQCGIHSQQACYPLAFGVPAALMAVALIVFVLGSGMYKKF--QPQGNIMGKVAKCIGFAIKNR 247 The following BLAST results are available for this feature:
BLAST of FC878001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878001 ID=FC878001; Name=FC878001; organism=Citrus clementina; type=EST; length=864bpback to top |