FC878017
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878017 vs. ExPASy Swiss-Prot
Match: ARK3_ARATH (Armadillo repeat-containing kinesin-like protein 3 OS=Arabidopsis thaliana GN=ARK3 PE=1 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.699e-50 Identity = 125/259 (48.26%), Postives = 151/259 (58.30%), Query Frame = 2 Query: 134 NYRNGTSNRSSLAKTDRPLSVNSNSKPAVKSRSFPASGPRKSSPASLGSAAVPKDYXXXXXXXXXXXXXXT---RNAEEMLADADFGDCVXXXXXXXXXXXXXNNWDAETYEFDEVLTEFASQKRVYQAVAKPVVESVLDGYNGTVMAYGQTGTGKLILLDHLEKKIRLLVE*WSVLWKIFWPEFLWTQILSQYPICSSIWRPY----RTFLIPTNDNISIAEDPKTGDVSLPGVTLVEIRDQHSFVELLKLXEAHRFA 889 +YRNGT RSSL + + K +VKS+S RKSSPA+LG + RN EE++ADADF DCV NNWD +T+EFDEVLTE+ASQKRVY+ VAKPVVE VLDGYNGT+MAYGQTGTGK L L ++ V ++ + + L L I S + Y + L P+NDNI+I EDPK GDVSLPG TLVEIRDQ SF+ELL+L EAHRFA Sbjct: 11 SYRNGTQ-RSSLRTQSSASTSSGGQKASVKSKSVL----RKSSPAALGGGSSKSGGGGDAGVPGRVRVAVRLRPRNGEELIADADFADCVELQPELKRLKLRKNNWDTDTFEFDEVLTEYASQKRVYEVVAKPVVEGVLDGYNGTIMAYGQTGTGKTYTLGQLGEED---VADRGIMVRAM-EDILAEVSLETDSISVSYLQLYMETVQDLLDPSNDNIAIVEDPKNGDVSLPGATLVEIRDQQSFLELLQLGEAHRFA 260
BLAST of FC878017 vs. ExPASy Swiss-Prot
Match: ARK2_ORYSJ (Armadillo repeat-containing kinesin-like protein 2 OS=Oryza sativa subsp. japonica GN=Os06g0137100 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 7.022e-46 Identity = 102/185 (55.14%), Postives = 122/185 (65.95%), Query Frame = 2 Query: 347 RNAEEMLADADFGDCVXXXXXXXXXXXXXNNWDAETYEFDEVLTEFASQKRVYQAVAKPVVESVLDGYNGTVMAYGQTGTGKLILLDHLEKKIR----LLVE*WSVLWKIFWPEFLWTQILSQYPICSSIWRPYRTFLIPTNDNISIAEDPKTGDVSLPGVTLVEIRDQHSFVELLKLXEAHRFA 889 RNA+E+ ADADFGDCV NNW++ETYEFDEVLTEFASQKRVY+ VAKPVVESVL+GYNGTVMAYGQTGTGK L L ++ ++V + PE T +S + L P NDNI+I EDP+TGDVSLPG T+VE+RDQ SFV+LL++ EAHR A Sbjct: 64 RNADELAADADFGDCVELQPELKRLKLRKNNWESETYEFDEVLTEFASQKRVYEVVAKPVVESVLEGYNGTVMAYGQTGTGKTFTLGRLGEEDTAARGIMVRAMEDILADITPE---TDTVS-VSYLQLYMEMIQDLLDPVNDNIAIVEDPRTGDVSLPGATVVEVRDQKSFVDLLRIGEAHRVA 244
BLAST of FC878017 vs. ExPASy Swiss-Prot
Match: ARK2_ARATH (Armadillo repeat-containing kinesin-like protein 2 OS=Arabidopsis thaliana GN=ARK2 PE=1 SV=2) HSP 1 Score: 182.185 bits (461), Expect = 3.485e-45 Identity = 126/267 (47.19%), Postives = 152/267 (56.93%), Query Frame = 2 Query: 122 AMANNYRNGTSNRSSLAKTDRPLSVNSNSKPAVKSRSFP------ASGPRKSSPASLGSA--AVPKDYXXXXXXXXXXXXXXTRNAEEMLADADFGDCVXXXXXXXXXXXXXNNWDAETYEFDEVLTEFASQKRVYQAVAKPVVESVLDGYNGTVMAYGQTGTGKLILLDHL---EKKIRLLVE*WSVLWKIFWPEFLWTQILSQYPICSSIWRPYRTFLIPTNDNISIAEDPKTGDVSLPGVTLVEIRDQHSFVELLKLXEAHRFA 889 AMA++ RNG S RP+S ++S ++S SF A PR+SS AS+G+A VP RNA+E +ADADF DCV NNWD ETYEFDEVLTE ASQKRVY+ VAKPVVESVL+GYNGTVMAYGQTGTGK L L + R ++ + I L T +S + L PTNDNI+I EDP+TGDVSLPG T VEIR+Q +F+ELL+L E HR A Sbjct: 2 AMASS-RNGAVRGSM-----RPVSGANSSN--LRSSSFKSRIPSSAPAPRRSSSASIGAADNGVP-------GRVRVAVRLRPRNADESVADADFADCVELQPELKRLKLRKNNWDTETYEFDEVLTEAASQKRVYEVVAKPVVESVLEGYNGTVMAYGQTGTGKTFTLGRLGDEDTAARGIMV--RSMEDIIGGTSLDTDSIS-VSYLQLYMETIQDLLDPTNDNIAIVEDPRTGDVSLPGATHVEIRNQQNFLELLQLGETHRVA 250
BLAST of FC878017 vs. ExPASy Swiss-Prot
Match: ARK1_ORYSJ (Armadillo repeat-containing kinesin-like protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0152900 PE=2 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.794e-33 Identity = 96/240 (40.00%), Postives = 118/240 (49.17%), Query Frame = 2 Query: 209 KPAVKSRSFPASGPRKS-SPASLGSAAVPKDYXXXXXXXXXXXXXXTRNAEEMLADADFGDCVXXXXXXXXXXXXXNNWDAETYEFDEVLTEFASQKRVYQAVAKPVVESVLDGYNGTVMAYGQTGTGKLILLDHLEK--------KIRLLVE*WSVLWKIFWPEFLWTQILSQYPICSSIWRPY----RTFLIPTNDNISIAEDPKTGDVSLPGVTLVEIRDQHSFVELLKLXEAHRFA 889 +PA +SRS R S SP+ AA D +N+E++ ADF CV NNW E+Y FDEV +E ASQKRVY+ VAKPVVESVL+GYNGTVMAYGQTGTGK + L +R L SV+ L + S + Y + L P NI I EDPKTG+VSLPG VEIRD +LL++ E +R A Sbjct: 20 RPAGRSRSVAPPSRRPSPSPSRARPAAADNDGGSDSCRVRVAVRLRPKNSEDLAHGADFDSCVELQPECKKLKLKKNNWSCESYRFDEVFSENASQKRVYEVVAKPVVESVLEGYNGTVMAYGQTGTGKTYTVGRLGNDDPSEGGIMVRALEHILSVM------------SLETDSVAISFLQLYLESVQDLLAPEKTNIPIVEDPKTGEVSLPGAAKVEIRDLEHVFQLLQIGEMNRHA 247
BLAST of FC878017 vs. ExPASy Swiss-Prot
Match: ARK1_ARATH (Armadillo repeat-containing kinesin-like protein 1 OS=Arabidopsis thaliana GN=ARK1 PE=1 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 3.997e-33 Identity = 98/268 (36.57%), Postives = 139/268 (51.87%), Query Frame = 2 Query: 110 LSVEAMANNYRNGTSNRSSLAKTDRPLSVNSNSKPAVKSRSFPASGPRKSSPASLGSAAVPKDYXXXXXXXXXXXXXXTRNAEEMLADADFGDCVXXXXXXXXXXXXXNNWDAETYEFDEVLTEFASQKRVYQAVAKPVVESVLDGYNGTVMAYGQTGTGKLILLDHLEKKIRLLVE*WSVLWKIFWPEFLWTQILSQYPICSSIWRPY--------RTFLIPTNDNISIAEDPKTGDVSLPGVTLVEIRDQHSFVELLKLXEAHRFA 889 L++ A + G ++ S L DRP + +S+S +V S S P++ R+S S + D RN EE+++DADF D V NNW++E+Y+FDEV T+ ASQKRVY+ VAKPVVE VL GYNGT+MAYGQTGTGK + + K + L +L+ S+ Y + L P +NISI ED KTG+VS+PG T+V I+D F+++L++ E +R A Sbjct: 40 LNLPARTSIVAPGIAHSSRLK--DRPSASSSSSSSSV-SASSPST--RRSGTPVRRSQSKDFDDDNDPGRVRVSVRVRPRNGEELISDADFADLVELQPEIKRLKLRKNNWNSESYKFDEVFTDTASQKRVYEGVAKPVVEGVLSGYNGTIMAYGQTGTGKTYTVGKIGKD--------DAAERGIMVRALEDILLNASSASISVEISYLQLYMETIQDLLAPEKNNISINEDAKTGEVSVPGATVVNIQDLDHFLQVLQVGETNRHA 294
BLAST of FC878017 vs. ExPASy Swiss-Prot
Match: KIF5C_MOUSE (Kinesin heavy chain isoform 5C OS=Mus musculus GN=Kif5c PE=1 SV=2) HSP 1 Score: 58.5362 bits (140), Expect = 1.036e-11 Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 455 YEFDEVLTEFASQKRVYQAVAKPVVESVLDGYNGTVMAYGQTGTGK 592 Y FD VL +Q++VY A AK +V+ VL+GYNGT+ AYGQT +GK Sbjct: 47 YVFDRVLPPNTTQEQVYNACAKQIVKDVLEGYNGTIFAYGQTSSGK 92 HSP 2 Score: 32.3426 bits (72), Expect = 1.036e-11 Identity = 18/47 (38.30%), Postives = 28/47 (59.57%), Query Frame = 1 Query: 622 DPATRGIMVRAMEDILAGV-SLDTD---SVTVSYLQLYMETIQDLLD 750 DP GI+ R DI + S+D + + VSY ++Y++ I+DLLD Sbjct: 102 DPQLMGIIPRIAHDIFDHIYSMDENLEFHIKVSYFEIYLDKIRDLLD 148
BLAST of FC878017 vs. ExPASy Swiss-Prot
Match: KIF5C_HUMAN (Kinesin heavy chain isoform 5C OS=Homo sapiens GN=KIF5C PE=1 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.036e-11 Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 455 YEFDEVLTEFASQKRVYQAVAKPVVESVLDGYNGTVMAYGQTGTGK 592 Y FD VL +Q++VY A AK +V+ VL+GYNGT+ AYGQT +GK Sbjct: 47 YVFDRVLPPNTTQEQVYNACAKQIVKDVLEGYNGTIFAYGQTSSGK 92 HSP 2 Score: 32.3426 bits (72), Expect = 1.036e-11 Identity = 18/47 (38.30%), Postives = 28/47 (59.57%), Query Frame = 1 Query: 622 DPATRGIMVRAMEDILAGV-SLDTD---SVTVSYLQLYMETIQDLLD 750 DP GI+ R DI + S+D + + VSY ++Y++ I+DLLD Sbjct: 102 DPQLMGIIPRIAHDIFDHIYSMDENLEFHIKVSYFEIYLDKIRDLLD 148
BLAST of FC878017 vs. ExPASy Swiss-Prot
Match: KIF5C_RAT (Kinesin heavy chain isoform 5C (Fragment) OS=Rattus norvegicus GN=Kif5c PE=1 SV=2) HSP 1 Score: 58.5362 bits (140), Expect = 1.081e-11 Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 2 Query: 455 YEFDEVLTEFASQKRVYQAVAKPVVESVLDGYNGTVMAYGQTGTGK 592 Y FD VL +Q++VY A AK +V+ VL+GYNGT+ AYGQT +GK Sbjct: 47 YVFDRVLPPNTTQEQVYNACAKQIVKDVLEGYNGTIFAYGQTSSGK 92 HSP 2 Score: 32.3426 bits (72), Expect = 1.081e-11 Identity = 18/47 (38.30%), Postives = 28/47 (59.57%), Query Frame = 1 Query: 622 DPATRGIMVRAMEDILAGV-SLDTD---SVTVSYLQLYMETIQDLLD 750 DP GI+ R DI + S+D + + VSY ++Y++ I+DLLD Sbjct: 102 DPQLMGIIPRIAHDIFDHIYSMDENLEFHIKVSYFEIYLDKIRDLLD 148
BLAST of FC878017 vs. ExPASy Swiss-Prot
Match: KINH_RAT (Kinesin-1 heavy chain OS=Rattus norvegicus GN=Kif5b PE=1 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 1.344e-11 Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 2 Query: 446 AETYEFDEVLTEFASQKRVYQAVAKPVVESVLDGYNGTVMAYGQTGTGK 592 ++ Y FD V SQ++VY AK +V+ VL+GYNGT+ AYGQT +GK Sbjct: 43 SKPYAFDRVFQSSTSQEQVYNDCAKKIVKDVLEGYNGTIFAYGQTSSGK 91 HSP 2 Score: 33.113 bits (74), Expect = 1.344e-11 Identity = 18/47 (38.30%), Postives = 30/47 (63.83%), Query Frame = 1 Query: 622 DPATRGIMVRAMEDILAGV-SLDTD---SVTVSYLQLYMETIQDLLD 750 DP GI+ R ++DI + S+D + + VSY ++Y++ I+DLLD Sbjct: 101 DPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLD 147
BLAST of FC878017 vs. ExPASy Swiss-Prot
Match: KINH_MOUSE (Kinesin-1 heavy chain OS=Mus musculus GN=Kif5b PE=1 SV=2) HSP 1 Score: 57.3806 bits (137), Expect = 1.344e-11 Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 2 Query: 446 AETYEFDEVLTEFASQKRVYQAVAKPVVESVLDGYNGTVMAYGQTGTGK 592 ++ Y FD V SQ++VY AK +V+ VL+GYNGT+ AYGQT +GK Sbjct: 43 SKPYAFDRVFQSSTSQEQVYNDCAKKIVKDVLEGYNGTIFAYGQTSSGK 91 HSP 2 Score: 33.113 bits (74), Expect = 1.344e-11 Identity = 18/47 (38.30%), Postives = 30/47 (63.83%), Query Frame = 1 Query: 622 DPATRGIMVRAMEDILAGV-SLDTD---SVTVSYLQLYMETIQDLLD 750 DP GI+ R ++DI + S+D + + VSY ++Y++ I+DLLD Sbjct: 101 DPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLD 147 The following BLAST results are available for this feature:
BLAST of FC878017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878017 ID=FC878017; Name=FC878017; organism=Citrus clementina; type=EST; length=889bpback to top |