FC878030

Overview
NameFC878030
Unique NameFC878030
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length890
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6987 contig Ccv1_Contig6987:1..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: PEPS_ASPSA (Carboxypeptidase cpdS OS=Aspergillus saitoi GN=cpdS PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 8.524e-68
Identity = 129/250 (51.60%), Postives = 168/250 (67.20%), Query Frame = 2
Query:  140 PRPRLTVPESSLHPHKRQSTQIITTEASKSFAVNGTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFGLQNRKVYITGESYAGRYVPYIADAMLSKNDSTYYDVKGIMFYDPSVAEDVLLEDIPAVAFVDKWAGLFHFNQTFMDDIHNR 889
            P    +V   ++   +R +     T  +  F VNGT+  IP+VDFD+GESYAGLLP +   N  S L+FWFFPS+NPDASDEITIWLNGGPGCSSL+G LQENGP  WQ G+    V NP++W NLTN+V+++QP GTGF+ G             F  +FK+FVDTF L  RKVYITGESYAG YVPYIADAML++ D+TY+++KGI   DPS+  D ++   PAV  ++ +  +F  N TF+  I+ +
Sbjct:   30 PLTHRSVASRAVPVERRSNDFEYLTNKTARFLVNGTS--IPEVDFDVGESYAGLLPNTPTGN--SSLFFWFFPSQNPDASDEITIWLNGGPGCSSLDGLLQENGPFLWQPGTYKP-VPNPYSWTNLTNVVYIDQPAGTGFSPGPSTVNDEEDVAAQFNSWFKHFVDTFDLHGRKVYITGESYAGMYVPYIADAMLNEEDTTYFNLKGIQINDPSINSDSVMMYSPAVRHLNHYNNIFRLNSTFLSYINGK 274          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: PEPF_ASPNG (Serine-type carboxypeptidase F OS=Aspergillus niger GN=pepF PE=1 SV=3)

HSP 1 Score: 214.542 bits (545), Expect = 6.336e-55
Identity = 106/212 (50.00%), Postives = 146/212 (68.87%), Query Frame = 2
Query:  254 AIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTFGLQNRKVYITGESYAGRYVPYIADAMLSKNDSTYYDVKGIMFYDPSVAE-DVLLEDIPAVAFVDKWAGLFHFNQTFMDDIHN 886
            ++PDV FD+GE Y+GL+PI K  N +  L+F F P+   +  DEITIWLNGGPGCSSLE FLQENG   WQ G+    V NP++W NLTN++WV+QPVGTGF+ G             F+ FFKN+   FG++N K+Y+TGESYAGRYVPYI+ A L +ND+ ++++KG + YDP + + D + E+ P V FV K   LF+FN +F+ ++ +
Sbjct:   72 SLPDVHFDLGEMYSGLVPIEKG-NVSRSLFFVFQPTIG-EPVDEITIWLNGGPGCSSLEAFLQENGRFVWQPGTYQP-VENPYSWVNLTNVLWVDQPVGTGFSLGVPTATSEEEIAEDFVKFFKNWQQIFGIKNFKIYVTGESYAGRYVPYISAAFLDQNDTEHFNLKGALAYDPCIGQFDYVQEEAPVVPFVQKNNALFNFNASFLAELES 280          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: YBY9_YEAST (Putative serine carboxypeptidase YBR139W OS=Saccharomyces cerevisiae GN=YBR139W PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.522e-24
Identity = 58/161 (36.02%), Postives = 89/161 (55.28%), Query Frame = 2
Query:  326 ETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAMLSKNDSTYYDVKGIM----FYDPSVAED 793
            ++   ++WFF S N  A+D I +WLNGGPGCSS  G L E GP S   G+    ++NP++W N  +M+++EQP+G GF+ G+               F + F + F  L++   +I GESYAG Y+P IA  ++ KN    +++  +M      DP +  D
Sbjct:  102 DSKHFFYWFFESRNDPANDPIILWLNGGPGCSSFTGLLFELGPSS--IGADMKPIHNPYSWNNNASMIFLEQPLGVGFSYGDEKVSSTKLAGKDAYIFLELFFEAFPHLRSNDFHIAGESYAGHYIPQIAHEIVVKNPERTFNLTSVMIGNGITDPLIQAD 260          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP36_ARATH (Serine carboxypeptidase-like 36 OS=Arabidopsis thaliana GN=SCPL36 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.555e-24
Identity = 63/186 (33.87%), Postives = 99/186 (53.23%), Query Frame = 2
Query:  251 GAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLG---FFKNFVDTFG-LQNRKVYITGESYAGRYVPYIADAMLSKNDSTYYDVKGIMFYDPSVAEDV 796
            G   DV F   + Y G + ++K A     LY++F  +  P  +  + IW NGGPGCSSL G  +E GP    +  G     NP++W N  N++++E PVGTGF+  N                  F  N+++ F   + R +YI G+SYAG YVP +A  +L +N+ T  +++GI+  +PS+  ++
Sbjct:   69 GQPSDVTF---KQYGGYVAVNKPAGRF--LYYYFVETIKPGNTTPLVIWFNGGPGCSSLGGAFKELGPFR-VHSDGKTLFRNPYSWNNEANVLFLETPVGTGFSYSNSPINGKQGDKATAEDNYMFLVNWLERFPEYKGRDIYIAGQSYAGHYVPQLAQIILHRNNQTLINLRGILIGNPSLNREI 248          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP39_ARATH (Serine carboxypeptidase-like 39 OS=Arabidopsis thaliana GN=SCPL39 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.353e-23
Identity = 63/185 (34.05%), Postives = 99/185 (53.51%), Query Frame = 2
Query:  260 PDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLG----FFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAMLSKN-DSTYYDVKGIMFYDPSVAEDV 796
            P V F     Y G + ++++A  +  LY++F  +     S  + +WLNGGPGCSSL G  QE GP    YG G     NP++W N+ N++++E PVGTGF+  N                   F   +++ F   + R+ YI GESYAG YVP +A  +L  N +  + +++GI+  +P++ + V
Sbjct:   87 PSVSF---RQYGGYVTVNESAGRS--LYYYFVEATKTKKSLPLVLWLNGGPGCSSLYGAFQELGPFR-IYGDGKTLYTNPYSWNNVANILFLESPVGTGFSYTNTESDLENPGDMKAAADKYIFLVKWLERFPEYKGREFYIAGESYAGHYVPQLAQTILVHNKNQNFINLRGILIGNPTLNDIV 265          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCPL2_DICDI (Serine carboxypeptidase S10 family member 2 OS=Dictyostelium discoideum GN=DDB_G0280105 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.414e-22
Identity = 62/177 (35.03%), Postives = 94/177 (53.11%), Query Frame = 2
Query:  257 IPDVDFDIGESYAGLLPISKAANETSE--LYFWFFPSE----NPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVY--NPWNWANLTNMVWVEQPVGTGF---TQGNXXXXXXXXXXXXFLGFFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAMLSKNDSTYYD 751
            +P +D  I  S++GLL      NETS+  L+FWFFP+     NP     + +WLNGGPGCSS++    E GP+ +   S  +  +  NPW+W N  NM++++QP GTG    +  +            F  F + F   F        +I+GESYAG Y+P++A  +L+ N++   D
Sbjct:   77 LPGLDNGILTSFSGLL----TTNETSDGNLFFWFFPANETVINP-MDAPLLVWLNGGPGCSSMDSVFIETGPLRFIGDSDNSDKFYINPWSWHNSANMLYIDQPFGTGLSFVSDNDGLVTNDLEINQNFYQFIQEFFQIFSNYSTLPFFISGESYAGHYIPHMASYILNMNENLSKD 248          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP37_ARATH (Serine carboxypeptidase-like 37 OS=Arabidopsis thaliana GN=SCPL37 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.583e-21
Identity = 56/177 (31.64%), Postives = 92/177 (51.98%), Query Frame = 2
Query:  290 YAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLG-------FFKNFVDTFG-LQNRKVYITGESYAGRYVPYIADAMLSKNDSTYYDVKGIMFYDPSVAEDV 796
            Y G +P+++ ++    LY++F  +  P+ S  + IW NGGP CSSL G   E GP     G G     NP++W N  N++++E PV TGF+  +                      F  N+++ F   + R +YI G+SYAG YVP +A  ++ +N  T  +++GI+  +PS+   +
Sbjct:   80 YGGYVPVNEPSSRF--LYYYFVEAIKPNTSTPLVIWFNGGPACSSLGGAFLELGPFRVHSG-GRKLFRNPYSWNNEANVLFLESPVTTGFSYSSNPIDLEELGEKGDKATAEDNYIFLMNWLERFPEYKGRDIYIAGQSYAGHYVPQLAQIIIHRNKKTLVNLRGILIGNPSLLTSI 253          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SXA2_SCHPO (Carboxypeptidase sxa2 OS=Schizosaccharomyces pombe GN=sxa2 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.818e-21
Identity = 66/207 (31.88%), Postives = 102/207 (49.28%), Query Frame = 2
Query:  254 AIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGN-XXXXXXXXXXXXFLGFFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAMLSKNDSTYYDVKGIMFYDPSVAEDVLLEDIPAVAFVDKWAGL-FHFNQT 865
            ++P+    + E Y+G L     AN    L++ + P+     S+   +WL GGPGC+   GF  ENGPI     S P+   NP +W N  NM+W++QP GTG++QG              F+   K+F   F  L  +K+Y+ GESY   +    A+A+LS+  S   +  G+       A+    E I A  +V+  + L ++FN T
Sbjct:   63 SLPEFKGSLPELYSGYLE----ANSDKSLFYTYAPAVVD--SETFIVWLQGGPGCAGTLGFFSENGPIEISQSS-PSPSLNPESWTNFANMLWLDQPFGTGYSQGQAAYTTTIEEASSDFVNALKSFYQKFPHLMKKKLYLVGESYGSIWSANFAEALLSE-PSLNINFMGVGIVSGLTADYETQEQITASIWVEHISKLGYYFNNT 261          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: SCP20_ARATH (Serine carboxypeptidase-like 20 OS=Arabidopsis thaliana GN=SCPL20 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.275e-20
Identity = 59/191 (30.89%), Postives = 99/191 (51.83%), Query Frame = 2
Query:  203 IITTEASKSFAVN---GTAGAIPDVDFDIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQY----GSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGN-------XXXXXXXXXXXXFLGFFKNFVDTFGLQNRKVYITGESYAGRYVPYIADAMLSKN 733
            +IT  A +S  +    G  G  P       + Y+G + I K   +   L+++F  SE   + D + +WLNGGPGCSS++GF+ E+GP +++      S P    NP++W+ ++N+++++ PVG GF+  N                    L +F+ F +    Q+   +I+GESYAG YVP +A  ++  N
Sbjct:   24 VITESAPESALITKLPGFEGTFPS------KHYSGYVTIDKEHGKN--LWYYFIESEKNPSKDPVVLWLNGGPGCSSMDGFVYEHGPFNFELPKKNNSLPLLHLNPYSWSKVSNIIYLDSPVGVGFSYSNNKSDYITGDIKTAVDSHAFLLKWFQMFPE---FQSNPFFISGESYAGVYVPTLASEVVIGN 203          
BLAST of FC878030 vs. ExPASy Swiss-Prot
Match: CBPY_PICPG (Carboxypeptidase Y OS=Pichia pastoris (strain GS115) GN=PRC1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.971e-20
Identity = 51/158 (32.28%), Postives = 79/158 (50.00%), Query Frame = 2
Query:  275 DIGESYAGLLPISKAANETSELYFWFFPSENPDASDEITIWLNGGPGCSSLEGFLQENGPISWQYGSGPAAVYNPWNWANLTNMVWVEQPVGTGFTQGNXXXXXXXXXXXXFLGFFKNFVDTF-GLQNRKVYITGESYAGRYVPYIADAMLSKNDSTY 745
            D  + Y+G L +     +    ++WFF S N   +D I +WLNGGPGCSSL G   E G  S +       ++NP++W    ++++++QPV  GF+  +               F + F   F   Q    +I GESYAG Y+P  AD +LS+ +  +
Sbjct:  118 DFTKQYSGYLDVEA---DDKHFFYWFFESRNDPQNDPIILWLNGGPGCSSLTGLFFELG--SSRINENLKPIFNPYSWNGNASIIYLDQPVNVGFSYSSSSVSNTVVAGEDVYAFLQLFFQHFPEYQTNDFHIAGESYAGHYIPVFADEILSQKNRNF 270          
The following BLAST results are available for this feature:
BLAST of FC878030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
PEPS_ASPSA8.524e-6851.60Carboxypeptidase cpdS OS=Aspergillus saitoi GN=cpd... [more]
PEPF_ASPNG6.336e-5550.00Serine-type carboxypeptidase F OS=Aspergillus nige... [more]
YBY9_YEAST1.522e-2436.02Putative serine carboxypeptidase YBR139W OS=Saccha... [more]
SCP36_ARATH7.555e-2433.87Serine carboxypeptidase-like 36 OS=Arabidopsis tha... [more]
SCP39_ARATH8.353e-2334.05Serine carboxypeptidase-like 39 OS=Arabidopsis tha... [more]
SCPL2_DICDI5.414e-2235.03Serine carboxypeptidase S10 family member 2 OS=Dic... [more]
SCP37_ARATH4.583e-2131.64Serine carboxypeptidase-like 37 OS=Arabidopsis tha... [more]
SXA2_SCHPO7.818e-2131.88Carboxypeptidase sxa2 OS=Schizosaccharomyces pombe... [more]
SCP20_ARATH2.275e-2030.89Serine carboxypeptidase-like 20 OS=Arabidopsis tha... [more]
CBPY_PICPG2.971e-2032.28Carboxypeptidase Y OS=Pichia pastoris (strain GS11... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA73AG12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA73AG12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878030 ID=FC878030; Name=FC878030; organism=Citrus clementina; type=EST; length=890bp
CACAGCACGAGCTTGACTTCCAACTAATCCCGGCACTGCGATCGCGAAGA
TGCAGCTTCTTTCACTCCTCGCTGTTGGTGGCCTCACAGCCAGTGTTTCT
GCCCGAAGCGCTCGCTCTGTTGGCAAGAAGAATGAGCTCCCTCGTCCTCG
TTTGACTGTTCCAGAATCGAGCCTTCATCCCCACAAGCGTCAGAGCACTC
AGATCATCACTACCGAGGCCTCCAAGTCTTTCGCTGTCAACGGAACTGCT
GGAGCAATCCCCGACGTCGATTTTGACATTGGCGAGTCTTACGCTGGTCT
TTTACCTATCAGCAAAGCTGCTAATGAGACCTCTGAACTGTACTTCTGGT
TCTTCCCATCCGAGAACCCTGATGCGAGTGACGAGATCACCATCTGGCTG
AACGGTGGTCCAGGTTGCTCATCTCTTGAAGGATTTCTTCAAGAGAACGG
ACCGATCTCATGGCAGTACGGTTCCGGACCAGCCGCTGTTTACAACCCCT
GGAATTGGGCAAACCTCACCAACATGGTCTGGGTTGAGCAGCCAGTGGGC
ACTGGATTCACCCAAGGCAATGCTACTGCCACCTCTCAGGAGGAGACCGC
TGAGGAATTCCTTGGCTTCTTCAAGAACTTTGTTGATACATTCGGTCTGC
AGAACCGCAAGGTGTACATCACTGGCGAGTCATACGCCGGACGCTACGTC
CCTTACATCGCGGATGCCATGTTGAGCAAAAACGACTCTACCTACTACGA
TGTGAAGGGTATCATGTTTTACGACCCCAGTGTAGCTGAGGATGTTCTTC
TTGAGGATATTCCCGCTGTTGCCTTTGTCGACAAATGGGCTGGTCTCTTT
CACTTTAACCAGACCTTCATGGACGATATCCATAACCGCT
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