FC878035
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878035 vs. ExPASy Swiss-Prot
Match: VCX1_SCHPO (Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe GN=vcx1 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.437e-30 Identity = 72/155 (46.45%), Postives = 106/155 (68.39%), Query Frame = 1 Query: 427 RKRLALMNLLGQPDRTKTDSSDLERSDTGDTKKRRPKI-SIVSQFKATILGSWVNVLLVCVPIGFALRYSHANGYAVFIVNFIAIIPLAAMLSFATEELALYVGETLGGLLNASFGNATELIVSIIALAQNKILIVQTSLIGSMLSNLLLVLGMC 888 + RL MN P + + + + L S+ + R+ + ++V K+ ++ S+ N++LV VPIG + N +VFI+N +AIIPLA++LSFATE+L++ G TLG LLNASFGNA ELIV ++AL + ++ IVQ+SL+GS+LSNLLLV GMC Sbjct: 9 KNRLEAMNSFNFPAQDRHERAPLLGSEYDHSMARQLSLLNVVGMTKSVLMSSYFNLMLVFVPIGLIAGWFEWNAKSVFILNMLAIIPLASLLSFATEQLSIISGPTLGALLNASFGNAIELIVGVLALKRGELRIVQSSLLGSILSNLLLVFGMC 163
BLAST of FC878035 vs. ExPASy Swiss-Prot
Match: CAX6_ARATH (Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 2.805e-26 Identity = 67/153 (43.79%), Postives = 98/153 (64.05%), Query Frame = 1 Query: 442 LMNLLGQP-DRTKTDSSDL-ERSDTGDTKKRRPKISIVSQFKATILGSWVNVLLVCVPIGFALRYSHANGYAVFIVNFIAIIPLAAMLSFATEELALYVGETLGGLLNASFGNATELIVSIIALAQNKILIVQTSLIGSMLSNLLLVLGMCFF 894 L +LL Q D +T+++ L E+ + + + P+ S+V FK IL + +N+LL P+ + Y N F+++ + I PLA L +ATE+L+ Y G T+GGLLNA+FGN ELI+SIIAL I +VQ +L+GS+LSN+LLVLG FF Sbjct: 39 LKSLLEQETDSPQTNAASLMEQGSLRERRAKAPRNSVVQSFKIVILSNKLNLLLPFGPLAILVHYLTDNKGWFFLLSLVGITPLAERLGYATEQLSCYTGATVGGLLNATFGNVIELIISIIALKNGMIRVVQLTLLGSILSNILLVLGCAFF 191
BLAST of FC878035 vs. ExPASy Swiss-Prot
Match: VCX1_YEAST (Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae GN=VCX1 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.785e-26 Identity = 62/103 (60.19%), Postives = 79/103 (76.70%), Query Frame = 1 Query: 583 VNVLLVCVPIGFALRYSHANGYAVFIVNFIAIIPLAAMLSFATEELALYVGETLGGLLNASFGNATELIVSIIALAQNKILIVQTSLIGSMLSNLLLVLGMCF 891 +N LLV VP+G + + F+ NF+AIIPLAA+L+ ATEELA G T+GGLLNA+FGNA ELIVSIIAL + ++ IVQ S++GS+LSNLLLVLG+CF Sbjct: 40 LNFLLVFVPLGLIWGHFQLSHTLTFLFNFLAIIPLAAILANATEELADKAGNTIGGLLNATFGNAVELIVSIIALKKGQVRIVQASMLGSLLSNLLLVLGLCF 142
BLAST of FC878035 vs. ExPASy Swiss-Prot
Match: CAX5_ARATH (Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 8.161e-26 Identity = 60/123 (48.78%), Postives = 82/123 (66.67%), Query Frame = 1 Query: 526 RRPKISIVSQFKATILGSWVNVLLVCVPIGFALRYSHANGYAVFIVNFIAIIPLAAMLSFATEELALYVGETLGGLLNASFGNATELIVSIIALAQNKILIVQTSLIGSMLSNLLLVLGMCFF 894 + P S++ FK IL + +N+LL P+ L Y N +F+++ + I PLA L +ATE+LA Y G T+GGLLNA+FGN TELI+SI AL I +VQ +L+GS+LSN+LLVLG FF Sbjct: 58 KTPNNSVLQSFKIVILSNKLNLLLPFGPLAILLHYLTDNKGWIFLLSLVGITPLAERLGYATEQLACYTGSTVGGLLNATFGNVTELIISIFALKSGMIRVVQLTLLGSILSNMLLVLGCAFF 180
BLAST of FC878035 vs. ExPASy Swiss-Prot
Match: CAX2_ORYSJ (Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 1.178e-24 Identity = 68/134 (50.75%), Postives = 87/134 (64.93%), Query Frame = 1 Query: 496 ERSDTGDTKKRRPKISIVSQFKATILGSWVNVLLVCVPIGFALRYSHANGYA-VFIVNFIAIIPLAAMLSFATEELALYVGETLGGLLNASFGNATELIVSIIALAQNKILIVQTSLIGSMLSNLLLVLGMCFF 894 E TG +K RR S+ + IL + +NVLL P+ L Y AN VF+ + I I PLA L +ATE+LALY G T+GGLLNA+FGNATE+I+S+ AL I +VQ SL+GS+LSN+LLVLG FF Sbjct: 49 ESLSTG-SKWRRALTSV----RVVILQAKINVLLPFGPLAVMLHYLSANHQGWVFLFSLIGITPLAERLGYATEQLALYTGPTIGGLLNATFGNATEMIISLYALKNGMIRVVQQSLLGSILSNMLLVLGCAFF 177
BLAST of FC878035 vs. ExPASy Swiss-Prot
Match: CAX2_ARATH (Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 2.625e-24 Identity = 63/150 (42.00%), Postives = 90/150 (60.00%), Query Frame = 1 Query: 460 QPDRTKTDSSDLERSDTGDTK-----KRRPKISIVSQFKATILGSWVNVLLVCVPIGFALRYSHANGYAVFIVNFIAIIPLAAMLSFATEELALYVGETLGGLLNASFGNATELIVSIIALAQNKILIVQTSLIGSMLSNLLLVLGMCFF 894 + D T+T + L + T + PK S+++ K I + +N+LL P+ + Y + VF++ + I PLA L +ATE+LA Y G T+GGLLNA+FGN TELI+SI AL I +VQ +L+GS+LSN+LLVLG FF Sbjct: 31 EEDATQTKEASLMEQGSLSTSFPQHTPKAPKNSVLNSIKIVIFCNKLNLLLPFGPLAILVHYMIDSKGWVFLLTLVGITPLAERLGYATEQLACYTGPTVGGLLNATFGNVTELIISIFALKNGMIRVVQLTLLGSILSNMLLVLGCAFF 180
BLAST of FC878035 vs. ExPASy Swiss-Prot
Match: CAX3_ARATH (Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.791e-23 Identity = 62/148 (41.89%), Postives = 93/148 (62.84%), Query Frame = 1 Query: 457 GQPDRTKTDSSDLERSDTGDTKKRRPKI--SIVSQFKATILGSWVNVLLVCVPIGFALRYSHANGYAVFIVNFIAIIPLAAMLSFATEELALYVGETLGGLLNASFGNATELIVSIIALAQNKILIVQTSLIGSMLSNLLLVLGMCFF 894 G+ + SS ++SD +K K +I+S + ILG+ + +L + +P+ + +F ++ I + PLA +SF TE+LA Y G T+GGLLNA+ GNATELI++I+ALA NK+ +V+ SL+GS+LSNLLLVLG F Sbjct: 31 GRTAHNMSSSSLRKKSDLRLVQKVPCKTLKNILSNLQEVILGTKLTLLFLAIPLAILANSYNYGRPLIFGLSLIGLTPLAERVSFLTEQLAFYTGPTVGGLLNATCGNATELIIAILALANNKVAVVKYSLLGSILSNLLLVLGTSLF 178
BLAST of FC878035 vs. ExPASy Swiss-Prot
Match: CAX1B_ORYSJ (Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.791e-23 Identity = 63/157 (40.13%), Postives = 95/157 (60.51%), Query Frame = 1 Query: 424 PRKRLALMNLLGQPDRTKTDSSDLERSDTGDTKKRRPKISIVSQFKATILGSWVNVLLVCVPIGFALRYSHANGYAVFIVNFIAIIPLAAMLSFATEELALYVGETLGGLLNASFGNATELIVSIIALAQNKILIVQTSLIGSMLSNLLLVLGMCFF 894 PR+R A NL R +D+S L + + S+++ +L + + +L V + A Y H VF+++ I ++PLA LSF TE++A Y G T+GGLLNA+FGN TE+I++++AL + KI +V+ SL+GS+LSNLLLVLG F Sbjct: 28 PRRRTA-HNLSSSSLRKSSDASLLHKVPCAALR------SLLANLNDVLLTTRLFLLFPAVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTEQIAFYTGPTVGGLLNATFGNVTEVIIALLALREGKIEVVKCSLLGSILSNLLLVLGTSLF 177
BLAST of FC878035 vs. ExPASy Swiss-Prot
Match: CAX3_ORYSJ (Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 4.951e-23 Identity = 56/118 (47.46%), Postives = 78/118 (66.10%), Query Frame = 1 Query: 541 SIVSQFKATILGSWVNVLLVCVPIGFALRYSHANGYAVFIVNFIAIIPLAAMLSFATEELALYVGETLGGLLNASFGNATELIVSIIALAQNKILIVQTSLIGSMLSNLLLVLGMCFF 894 S + + I S +N+LL P L Y+ + VF+ + + I PLA L +ATE+LA+Y G T+GGLLNA+FGNATE+I++I AL I +VQ SL+GS+LSN+LLV+G FF Sbjct: 39 SALRSIRIVIFTSKLNLLLPFGPASIILHYTTSRHGLVFLFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCAFF 156
BLAST of FC878035 vs. ExPASy Swiss-Prot
Match: CAX1_ARATH (Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3) HSP 1 Score: 107.071 bits (266), Expect = 1.441e-22 Identity = 62/149 (41.61%), Postives = 90/149 (60.40%), Query Frame = 1 Query: 454 LGQPDRTKTDSSDLERSDTGDTKKRRPK--ISIVSQFKATILGSWVNVLLVCVPIGFALRYSHANGYAVFIVNFIAIIPLAAMLSFATEELALYVGETLGGLLNASFGNATELIVSIIALAQNKILIVQTSLIGSMLSNLLLVLGMCFF 894 LG+ + SS ++SD +K K +S + ILG+ + +L +P Y + +F ++ + + PLA +SF TE+LA Y G TLGGLLNA+ GNATELI++I+AL NK+ +V+ SL+GS+LSNLLLVLG F Sbjct: 30 LGRTAHNMSSSSLRKKSDLRVIQKVPYKGLKDFLSNLQEVILGTKLAILFPAIPAAIICTYCGVSQPWIFGLSLLGLTPLAERVSFLTEQLAFYTGPTLGGLLNATCGNATELIIAILALTNNKVAVVKYSLLGSILSNLLLVLGTSLF 178 The following BLAST results are available for this feature:
BLAST of FC878035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878035 ID=FC878035; Name=FC878035; organism=Citrus clementina; type=EST; length=894bpback to top |