FC878040
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878040 vs. ExPASy Swiss-Prot
Match: SKP1A_ARATH (SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 8.508e-33 Identity = 70/109 (64.22%), Postives = 82/109 (75.23%), Query Frame = 2 Query: 44 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLIL 370 S K IVLKS DGESFEVEEAVALES TI HM+EDDC DNG+PLPNVT KILAKV+EYCK+HVE A++ ++DLK+WD DF+K+DQATLF+LIL Sbjct: 2 SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASK-------AEAVEGAATSDDDLKAWDADFMKIDQATLFELIL 103
BLAST of FC878040 vs. ExPASy Swiss-Prot
Match: ASK4_ARATH (SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.111e-32 Identity = 71/107 (66.36%), Postives = 81/107 (75.70%), Query Frame = 2 Query: 50 KMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLIL 370 KMI+LKS DGESFE+EEAVA++S TIKHMIEDDCADNGIPLPNVTG ILAKV+EYCKKHVE A ++LK+WD++FVKVDQ TLFDLIL Sbjct: 6 KMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHVEAAA------EAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLIL 106
BLAST of FC878040 vs. ExPASy Swiss-Prot
Match: SKP1B_ARATH (SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.202e-32 Identity = 69/114 (60.53%), Postives = 82/114 (71.93%), Query Frame = 2 Query: 38 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEV---PATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLIL 370 MS+ + I LKS DGE+FE++EAVALES TIKHMIEDDC DNGIPLPNVT KIL+KV+EYCK+HVE T +EDLK+WD++F+KVDQ TLFDLIL Sbjct: 1 MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYCKRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLIL 114
BLAST of FC878040 vs. ExPASy Swiss-Prot
Match: ASK3_ARATH (SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.229e-31 Identity = 70/106 (66.04%), Postives = 76/106 (71.70%), Query Frame = 2 Query: 50 KMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLI 367 KMI+LKS DGESFEVEEAVA+ES TIKHMIEDDC DNGIPLPNVTG ILAKV+EYCKKHVE A +LK+WD DFVKVD TLFDL+ Sbjct: 6 KMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKKHVEAAA------EAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLL 105
BLAST of FC878040 vs. ExPASy Swiss-Prot
Match: ASK11_ARATH (SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.231e-23 Identity = 58/109 (53.21%), Postives = 71/109 (65.14%), Query Frame = 2 Query: 44 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLIL 370 S KMIVL S DG+SFEVEEAVA++S TI HM+EDDC +GIPL NV KIL KV+EYCKKH A EEDL +WD F+ ++Q+T+F+LIL Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKHHVDEAN---------------PISEEDLNNWDEKFMDLEQSTIFELIL 95
BLAST of FC878040 vs. ExPASy Swiss-Prot
Match: ASK12_ARATH (SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.111e-23 Identity = 58/110 (52.73%), Postives = 71/110 (64.55%), Query Frame = 2 Query: 44 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKK-HVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLIL 370 S KMIVL S DG+SFEVEEAVA++S TI HM+EDDC +GIPL NV KIL KV+EYCKK HV+ EEDL WD F+ ++Q+T+F+LIL Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKYHVD----------------EANPISEEDLNKWDEKFMDLEQSTIFELIL 95
BLAST of FC878040 vs. ExPASy Swiss-Prot
Match: ASK10_ARATH (SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.361e-22 Identity = 57/109 (52.29%), Postives = 67/109 (61.47%), Query Frame = 2 Query: 44 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLIL 370 S K I+LKS DG SFEVEE A + TI HM EDDC DNGIPLP VTGKIL V+EYC KH V A +EDLK WD +F++ Q+T+FDLI+ Sbjct: 2 STKKIILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCNKH-HVDAAN--------------PCSDEDLKKWDKEFMEKYQSTIFDLIM 95
BLAST of FC878040 vs. ExPASy Swiss-Prot
Match: ASK13_ARATH (SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.322e-22 Identity = 54/109 (49.54%), Postives = 73/109 (66.97%), Query Frame = 2 Query: 50 KMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKV--DQATLFDLIL 370 KM++L S DGESF+VEEAVA++S TI HMIEDDC NG+P+ NVTG IL+KV+EYCKKHV + + +++LK WD +F+K +TLFD++L Sbjct: 3 KMVMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKHVVSDSPTE--------------ESKDELKKWDAEFMKALEQSSTLFDVML 97
BLAST of FC878040 vs. ExPASy Swiss-Prot
Match: ASK9_ARATH (SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.720e-21 Identity = 56/109 (51.38%), Postives = 67/109 (61.47%), Query Frame = 2 Query: 44 SPKMIVLKSCDGESFEVEEAVALE-STTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLI 367 S K I+LKS DG SFEVEE A + I HM E+DC DNGIPLPNVTGKILA V+EYC KH V A ++DLK WD +F++ D +T+FDLI Sbjct: 2 STKKIILKSSDGHSFEVEEEAARQCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEYCNKH-HVDAAN--------------PCSDDDLKKWDKEFMEKDTSTIFDLI 95
BLAST of FC878040 vs. ExPASy Swiss-Prot
Match: ASK16_ARATH (SKP1-like protein 16 OS=Arabidopsis thaliana GN=ASK16 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.840e-19 Identity = 57/112 (50.89%), Postives = 68/112 (60.71%), Query Frame = 2 Query: 38 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADNGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVK-VDQATLFDLIL 370 MSS K IVL S D ESFEVEEAVA + I HMI+DDCAD IPL NVTG ILA V+EYCKKHV + D + +L++WD +F+K D T+ LIL Sbjct: 1 MSSNK-IVLTSSDDESFEVEEAVARKLKVIAHMIDDDCADKAIPLENVTGNILALVIEYCKKHV-LDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLIL 110 The following BLAST results are available for this feature:
BLAST of FC878040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878040 ID=FC878040; Name=FC878040; organism=Citrus clementina; type=EST; length=865bpback to top |