FC878089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878089 vs. ExPASy Swiss-Prot
Match: GAT26_ARATH (GATA transcription factor 26 OS=Arabidopsis thaliana GN=TIFY1 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 3.040e-24 Identity = 60/105 (57.14%), Postives = 72/105 (68.57%), Query Frame = 2 Query: 398 SSQLTLSFRGQVYVFDSVTPDKVQAVXXXXXXXXXXXX-PQGMEVIPHSQR-GIADYPAKCTQPQRAASLDRFRQKRKERCFDKKVRYSVRQEVALRMQRNKGQF 706 ++QLT+SFRGQVYVFD+V DKV AV PQ ME+ + +Y ++C+ PQRA SLDRFR+KR RCF+KKVRY VRQEVALRM RNKGQF Sbjct: 81 ANQLTISFRGQVYVFDAVGADKVDAVLSLLGGSTELAPGPQVMELAQQQNHMPVVEYQSRCSLPQRAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNKGQF 185
BLAST of FC878089 vs. ExPASy Swiss-Prot
Match: GAT25_ARATH (GATA transcription factor 25 OS=Arabidopsis thaliana GN=TIFY2A PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.668e-22 Identity = 72/168 (42.86%), Postives = 91/168 (54.17%), Query Frame = 2 Query: 293 HLSYDPHSA--LENGIVVVEDVAHDSGYAAGANE------------------------LSNSSQLTLSFRGQVYVFDSVTPDKVQAVXXXXXXXXXXXX-PQGMEVIPHSQRGIADYPA---KCTQPQRAASLDRFRQKRKERCFDKKVRYSVRQEVALRMQRNKGQF 706 H+ ++ H+ + NG +V+D A D G A G +E QLTLSF+GQVYVFDSV P+KVQAV P G+ PH ++ P + + PQR ASL RFR+KRK R FDKK+RY+VR+EVALRMQRNKGQF Sbjct: 21 HVQFEHHALHHIHNGSGMVDDQA-DDGNAGGMSEGVETDIPSHPGNVTDNRGEVVDRGSEQGDQLTLSFQGQVYVFDSVLPEKVQAVLLLLGGRELPQAAPPGLGS-PHQNNRVSSLPGTPQRFSIPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQF 186
BLAST of FC878089 vs. ExPASy Swiss-Prot
Match: GAT27_ARATH (GATA transcription factor 27 OS=Arabidopsis thaliana GN=TIFY2B PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.409e-21 Identity = 57/109 (52.29%), Postives = 69/109 (63.30%), Query Frame = 2 Query: 389 LSNSSQLTLSFRGQVYVFDSVTPDKVQAVXXXXXXXXXXXXPQGMEVIPHSQR---GIADYPAKCTQPQRAASLDRFRQKRKERCFDKKVRYSVRQEVALRMQRNKGQF 706 + N QLTLSF+GQVYVFD V+P+KVQAV PH G++ P + + PQR ASL RFR+KRK R FDK +RY+VR+EVALRMQR KGQF Sbjct: 74 IENGDQLTLSFQGQVYVFDRVSPEKVQAVLLLLGGREVPHTLPTTLGSPHQNNRVLGLSGTPQRLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQF 182 The following BLAST results are available for this feature:
BLAST of FC878089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878089 ID=FC878089; Name=FC878089; organism=Citrus clementina; type=EST; length=707bpback to top |