FC878098
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878098 vs. ExPASy Swiss-Prot
Match: CAP16_ARATH (Putative clathrin assembly protein At4g40080 OS=Arabidopsis thaliana GN=At4g40080 PE=2 SV=2) HSP 1 Score: 257.684 bits (657), Expect = 5.681e-68 Identity = 134/230 (58.26%), Postives = 163/230 (70.87%), Query Frame = 3 Query: 129 MGRL---ANLMGIIKDKVSQSKAAIIS---KPKTLTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQLSVYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLLSTSRVLGFFLXXXXXXVEMDKEEEKVSALVNIXXXXXXXXXXXXXXQMCKTPDCLHVRGNPLVDDIMGLVGED 800 MGR+ A+L+G IKDK SQSKAA++S K KTL+ HLS+LRATTHDPSTPP + L +LS G SRATA++ +E++M+RL TT DA VA+KSLI +HHIVKHG FILQDQLSV+P++GGRNYLKLS FRD +PL WELSSWVRWYALYLEHLLSTSR++GFF+ + ++ EE VS+L N + CK PD G L D I LVGED Sbjct: 1 MGRITSFADLIGRIKDKASQSKAALVSSNTKSKTLSFHLSVLRATTHDPSTPPGNRHLAVILSAGTGSRATASSAVESIMERLHTTGDACVALKSLIIIHHIVKHGRFILQDQLSVFPASGGRNYLKLSAFRDEKSPLMWELSSWVRWYALYLEHLLSTSRIMGFFISSTSSTIHKEEYEEMVSSLTNSDLLREIDALVGLLEEACKIPDLPFSGGKSLADKITQLVGED 230
BLAST of FC878098 vs. ExPASy Swiss-Prot
Match: CAP17_ARATH (Putative clathrin assembly protein At5g10410 OS=Arabidopsis thaliana GN=At5g10410 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.913e-23 Identity = 73/227 (32.16%), Postives = 114/227 (50.22%), Query Frame = 3 Query: 132 GRLANLMGIIKDKVSQSKAAII---SKPKTLTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQLSVYPSAG-GRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLLSTSRVLGFFLXXXXXXVEMDKEEEKVSALVNIXXXXXXXXXXXXXXQMCKTPDCLHVRGNPLVDDIMGLVGED 800 G +++G KDK S KA ++ +HL+LL++TT P+ PP+ ++ ++S+ +S A AA A + RL+ T +A VA KSLI +H ++K + G GRN LKL+ F D ++ LT ELS W+RWY YL+ L +VLG F + +E+++VS+ +C P+ + N +VD+I LV ED Sbjct: 3 GLKTHIIGKFKDKASIGKARLVHSFGSTAVKYIHLALLKSTTRTPNKPPNSDYVSAVISYSNSRYAPAA--FSAALWRLRVTKNAIVATKSLIVIHKLIKSSR-------DKFEGLGHGRNNLKLNEFSDKSSNLTLELSQWIRWYGQYLDRLSWVPKVLGSFPNLLVNPKDKVEEKDRVSSYQTGYIIRQTDSLVSFFEHICTRPEIPPMFQNKIVDEIRELVIED 220
BLAST of FC878098 vs. ExPASy Swiss-Prot
Match: CAP18_ARATH (Putative clathrin assembly protein At5g65370 OS=Arabidopsis thaliana GN=At5g65370 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.419e-18 Identity = 66/191 (34.55%), Postives = 103/191 (53.93%), Query Frame = 3 Query: 129 MGRLANLMGIIKDKVSQSKAAII---SKPKTLTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRLQTTHDASVAIKSLIAVHHIVK-----HGSFILQDQLS----VYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLLSTSRVLGFFLXXXXXXVEMDKEEEKVSA 665 MG+LA L GI+KD+ SQ K ++ S T+ L+LL+AT+H + PP K +T L S ++A++ RL+ T D VA K LI +H +VK +G L++ ++ +Y + GG N LKL++ N++ T EL+ WV+WY YL+ LS + VLG + E ++VS+ Sbjct: 1 MGKLATLNGILKDEASQMKLNVVHLCSSVNAKTIDLALLKATSHTSNNPPSDKYVTFLQST--IDTCYGPDTVDAILHRLRVTTDVCVAAKCLILLHKMVKSESGYNGEDSLRNNINHRTLIY-TQGGSN-LKLNDLNVNSSRFTRELTPWVQWYKQYLDCYLSIAEVLGITPNIKEKNEDKRLETQRVSS 187
BLAST of FC878098 vs. ExPASy Swiss-Prot
Match: CAP6_ARATH (Putative clathrin assembly protein At4g25940 OS=Arabidopsis thaliana GN=At4g25940 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.495e-17 Identity = 57/154 (37.01%), Postives = 88/154 (57.14%), Query Frame = 3 Query: 150 MGIIKDKVSQSKAAIISKPKTLTLHLSLLRATTHDPSTPPDP--KRLTTLLSFGHSSRATAAAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQLSVYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLLSTSRVLGF 605 +G IKD + S A + S+ K L + ++++AT H S P + +R+ + S RA A I AL RL T + VAIK LI +H ++ G +++L Y G + L++SNF+D+T+PL W+ S+W+R YAL+LE L RVL + Sbjct: 11 VGAIKDSTTVSIAKVNSEFKDLDV--AIVKATNHVESAPKERHIRRIFSATSVVQP-RADVAYCIHALAKRLSKTRNWVVAIKVLIVIHRTLREGDPTFREELLNYSHRG--HILRISNFKDDTSPLAWDCSAWIRTYALFLEERLECYRVLKY 159
BLAST of FC878098 vs. ExPASy Swiss-Prot
Match: CAP7_ARATH (Putative clathrin assembly protein At5g57200 OS=Arabidopsis thaliana GN=At5g57200 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.265e-16 Identity = 55/153 (35.95%), Postives = 85/153 (55.56%), Query Frame = 3 Query: 153 GIIKDKVSQSKAAIISKPKTLTLHLSLLRATTHDPSTPPDPKRLTTLLSFGH--SSRATAAAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQLSVYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLLSTSRVLGF 605 G +KD + A + S+ K L + ++++AT H S PP + + + S RA A I AL RL T + VA+K LI +H ++ G +++L Y R+ L++SNF+D+T+PL W+ S+WVR YAL+LE L RVL + Sbjct: 12 GALKDTTTVGLAKVNSEFKDLDI--AIVKATNHVES-PPKERHVRKIFSATSVIQPRADVAYCIHALSKRLSKTRNWVVAMKVLIVIHRTLREGDPTFREELLNYSHR--RHILRISNFKDDTSPLAWDCSAWVRTYALFLEERLECYRVLKY 159
BLAST of FC878098 vs. ExPASy Swiss-Prot
Match: CAP8_ARATH (Putative clathrin assembly protein At2g01600 OS=Arabidopsis thaliana GN=At2g01600 PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.468e-15 Identity = 51/153 (33.33%), Postives = 85/153 (55.56%), Query Frame = 3 Query: 153 GIIKDKVSQSKAAIISKPKTLTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATA--AAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQLSVYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLLSTSRVLGF 605 G +KD + S+ L +++++AT H PP + L + + +RA A A I AL RL T + +VA+K+LI +H +++ G +++L + G L+LSNF+D+++P+ W+ S+WVR YAL+LE L RVL + Sbjct: 12 GALKDSTKVGLVRVNSE--YADLDVAIVKATNH-VECPPKDRHLRKIFAATSVTRARADVAYCIHALSRRLHKTRNWTVALKTLIVIHRLLREGDPTFREELLNFSQRG--RILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRVLKY 159
BLAST of FC878098 vs. ExPASy Swiss-Prot
Match: CAP9_ARATH (Putative clathrin assembly protein At1g14910 OS=Arabidopsis thaliana GN=At1g14910 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.769e-14 Identity = 44/130 (33.85%), Postives = 74/130 (56.92%), Query Frame = 3 Query: 219 LHLSLLRATTHDPSTPPDPK-RLTTLLSFGHSSRATAAAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQLSVYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLLSTSRVLGF 605 L +++++AT H P D R L + RA A I AL RL T + +VA+K+L+ +H +++ G +++L + G +++SNF+D+++P+ W+ S WVR YAL+LE L RVL + Sbjct: 32 LDVAIVKATNHVECPPKDRHLRKIFLATSAIRPRADVAYCIHALSRRLHKTRNWTVALKALLVIHRLLRDGDPTFREELLNFSQKG--RIMQISNFKDDSSPVAWDCSGWVRTYALFLEERLECFRVLKY 159
BLAST of FC878098 vs. ExPASy Swiss-Prot
Match: CAP10_ARATH (Putative clathrin assembly protein At5g35200 OS=Arabidopsis thaliana GN=At5g35200 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.168e-14 Identity = 53/159 (33.33%), Postives = 84/159 (52.83%), Query Frame = 3 Query: 138 LANLMGIIKDKVSQSKAAIISKPKTLTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSS---RATAAAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQLSVYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLLSTSRVLGF 605 L +G IKD + S A + S K L + ++++AT H P +R + S+ RA A I AL RL TH+ +VA+K+LI +H ++ +++ Y S + L +S+F+D++ P W S+WVR+YAL+LE L RVL + Sbjct: 11 LRRYLGAIKDTTTVSLAKVNSDYKELDI--AIVKATNHVER--PSKERYIRAIFMAISATRPRADVAYCIHALARRLSRTHNWAVALKTLIVIHRALREVDQTFHEEVINY-SRSRSHMLNMSHFKDDSGPNAWAYSAWVRFYALFLEERLECFRVLKY 164
BLAST of FC878098 vs. ExPASy Swiss-Prot
Match: CAP1_ARATH (Probable clathrin assembly protein At4g32285 OS=Arabidopsis thaliana GN=At4g32285 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.056e-14 Identity = 46/144 (31.94%), Postives = 81/144 (56.25%), Query Frame = 3 Query: 150 MGIIKDKVSQSKAAIISKPKTLTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQLSVYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLL 581 +G++KD+ S A + S L +++++AT+HD D K + +LS SR A + ++ RL+ T D VA+K+L+ VH ++ G + Q+++ +Y + G L +S+FRD +W+ S++VR YA YL+ L Sbjct: 9 IGVVKDQTSIGIAKVASNMAP-DLEVAIVKATSHDDDQSSD-KYIREILSLTSLSRGYVHACVTSVSRRLKKTRDWIVALKALMLVHRLLNEGDPLFQEEI-LYATRRGTRILNMSDFRDEAHSSSWDHSAFVRTYASYLDQRL 149
BLAST of FC878098 vs. ExPASy Swiss-Prot
Match: CAP3_ARATH (Putative clathrin assembly protein At4g02650 OS=Arabidopsis thaliana GN=At4g02650 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.795e-13 Identity = 47/154 (30.52%), Postives = 83/154 (53.90%), Query Frame = 3 Query: 123 MNMGRLANLMGIIKDKVSQSKAAIISKPKTLT-LHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATAAAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQLSVYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLL 581 M +L +G +KD+ S A + + +LT L +++++AT HD P + K + +L SR +A + L RL T + SVA+K+LI + ++ G + ++ + + G L +S+FRD + +W+ S++VR YALYL+ L Sbjct: 1 MGSSKLKRAIGAVKDQTSVGLAKVGGRSSSLTELEIAVVKATRHD-DYPAEDKYIREILCLTSYSRNYVSACVATLSRRLNKTKNWSVALKTLILIQRLLTDGDRAYEQEI-FFATRRGTRLLNMSDFRDASQSDSWDYSAFVRTYALYLDERL 152 The following BLAST results are available for this feature:
BLAST of FC878098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878098 ID=FC878098; Name=FC878098; organism=Citrus clementina; type=EST; length=816bpback to top |