FC878113

Overview
NameFC878113
Unique NameFC878113
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length829
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12189 contig Ccv1_Contig12189:10..838. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 9.024e-77
Identity = 148/259 (57.14%), Postives = 184/259 (71.04%), Query Frame = 2
Query:   53 DCFWVLALASKCKSLTFQNNILASILLCMALFWLAMALCFWAHPGGHAWGKHLYKKGSKACSKPIPGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLA 829
            D  W++AL SKC     Q N LA +LL M   WL M   +W+HPGG AWGK+       +    IPGP+G P IGSM LM +L HH +          R+MAFSLG+TRVI+TC P+VAKEILNSSVFADRPVKESAYSLMFNRAIGFA YGVYWR+LRRIA+ HLFCP+QI ++E QRS IA+QMV ++ +    + R+R +LK ASL+NMMCSVFG++Y L  +  N+    L  LV++GYDLLG  N++DHLP+LA
Sbjct:    7 DNLWIIALTSKCT----QEN-LAWVLLIMGSLWLTMTFYYWSHPGGPAWGKYYTYSPPLSI---IPGPKGFPLIGSMGLMTSLAHHRIAAAAATCRAKRLMAFSLGDTRVIVTCHPDVAKEILNSSVFADRPVKESAYSLMFNRAIGFASYGVYWRSLRRIASNHLFCPRQIKASELQRSQIAAQMVHILNNKRHRSLRVRQVLKKASLSNMMCSVFGQEYKL--HDPNSGMEDLGILVDQGYDLLGLFNWADHLPFLA 255          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 1.076e-45
Identity = 118/275 (42.91%), Postives = 157/275 (57.09%), Query Frame = 2
Query:   71 ALASKCKSLTFQNNILASIL----LC----------MALFWLAMALCFWAHPGGHAWGKHLYKKGSKACSKPIPGPRGLPFIGSM-SLMANLPHHNLXXXXXXXXXXR---VMAFSLGETRVIITCSPNVAKEILNSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGS--AFRLRDILKPASLNNMMCSVFGRKYALLGYS--SNTEARRLSRLVEEGYDLLGKLNFSDHLPWLA 829
            A AS C   T+    L ++L    LC          +  F  A  L + A PGG AW     + G+     PI GPRGLP  GS+ +L   LPH  L          R   +MAFS+GET  +++  P  A+E+L    FADRP+K SA  L+F RAIGFAP G YWR LRRIA+THLF P+++ + EP R   A+ M+S +A+   +  A  LR  L+ A+LNN+M SVFGR+Y +   S  +  EA +L  +V EG++LLG  N+SDHLPWLA
Sbjct:    6 ATASSCVDATWWAYALPALLGADTLCAHPALLAGAVLLAFATAAVLAWAASPGGPAWAHGRGRLGAT----PIEGPRGLPVFGSIFALSRGLPHRALDAMSRDAAAPRARELMAFSVGETPAVVSSCPATAREVLAHPSFADRPLKRSARELLFARAIGFAPSGEYWRLLRRIASTHLFSPRRVAAHEPGRQADATAMLSAMAAEQSATGAVVLRPHLQAAALNNIMGSVFGRRYDVSSSSGAAADEAEQLKSMVREGFELLGAFNWSDHLPWLA 276          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.340e-45
Identity = 103/238 (43.28%), Postives = 145/238 (60.92%), Query Frame = 2
Query:  125 ILLCMALFWLAMALCFWAHPGGHAW-GKHLYKKGSKACSKPIPGPRGLPFIGS-MSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQR-SDIASQMVSMIASY-GGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWL 826
            + + + +  +   L  W  PGG AW G+H  K+G  A    IPGP+G P IGS M +   LPH  L          ++M+FSLG T  +IT  P VA+E+L S  FA+RP+K+SA  L+F RAIGFAP G YWR LRRIA+ HLF P++I + E  R +D+ + +  +   Y      R+R  L+ A+LNN+M SVFGR++ +     N E ++L  +V+EG+ LLG  N++DHLPWL
Sbjct:   44 LYIALLIVAVCAVLVSWLSPGGCAWAGRH--KRGRVA----IPGPKGWPIIGSLMDMSVGLPHRKLESLARLHGAKQLMSFSLGCTPAVITSDPEVARELLTSPHFANRPLKQSAQQLLFGRAIGFAPNGGYWRLLRRIASAHLFAPRRIAAHEAGRQADVVAMLDDIQKEYHSKGVVRVRRHLQGAALNNIMGSVFGRRFDM--SHENEEVKKLREMVDEGFQLLGAFNWADHLPWL 273          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.032e-40
Identity = 107/263 (40.68%), Postives = 139/263 (52.85%), Query Frame = 2
Query:   59 FWVLALASKCKSLTFQNNILASILLCMALFWLA---MALCFWA-HPGGHAWGKHLYKKGSKACSKPIPGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIAS--YGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLA 829
            +WV AL +    L   + + A   L   L +LA   +AL  WA  PGG AW        S     P+  P       S    A  P               +MAFS+G+T  +++  P  A+E+L    FADRPVK SA  LMF RAIGFAP G YWR LRR+A+THLF P+++ S EP R   A  M+  IA+      A  LR  L+ A+LNN+M SVFG +Y +   +   EA  L  +V EG++LLG  N+SDHLPWLA
Sbjct:   15 WWVYALPA----LLGSDTLCAHPALLAGLIFLATVSVALLAWATSPGGPAWTNGRGASASLLSWDPVVCPCSAA--SSRCPGAAAPRPRRDGPRRRPRAKELMAFSVGDTPAVVSSCPATAREVLAHPSFADRPVKRSARELMFARAIGFAPNGEYWRRLRRVASTHLFSPRRVASHEPGRQGDAEAMLRSIAAEQSASGAVALRPHLQAAALNNIMGSVFGTRYDVTSGAGAAEAEHLKSMVREGFELLGAFNWSDHLPWLA 271          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.710e-17
Identity = 62/199 (31.16%), Postives = 99/199 (49.75%), Query Frame = 2
Query:  248 PGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNS--SVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSV-FGRKYALLGYSSNTEARRLSRLVEEGYDLLG---KLNFSDHLPWL 826
            PGPR LPFIG++  +  LPH +L           +M   LG    ++  S  +A+EI  +  SVF+ RP   +A  L +   + FAPYG YWR +R+I    L  PK++ S E  R +    ++  IA   G    L + L  +  NN++C +  G++      S   +A ++S +++E   +LG    ++F   L WL
Sbjct:   35 PGPRKLPFIGNLHQLGTLPHQSLQYLSNKHGP--LMFLQLGSIPTLVVSSAEMAREIFKNHDSVFSGRPSLYAANRLGYGSTVSFAPYGEYWREMRKIMILELLSPKRVQSFEAVRFEEVKLLLQTIALSHGPV-NLSE-LTLSLTNNIVCRIALGKR----NRSGADDANKVSEMLKETQAMLGGFFPVDFFPRLGWL 225          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.035e-17
Identity = 63/211 (29.86%), Postives = 101/211 (47.87%), Query Frame = 2
Query:  209 LYKKGSKACSKPIPGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNS--SVFADRPVKESAYSLMFN-RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSV-FGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLA 829
            L K+ S    K  P P GLP IG++  +    H +L           +M   LG   V+I  S ++A+EIL +    FA+RP  + +  L++N R +  APYG YWR ++ +   HL   K + S    R +  + M++ I       F +  +L+    N+++C V  GRK     Y   T+ ++L+  + E   LLG  +    +PWLA
Sbjct:   19 LKKQLSGKKGKTPPSPPGLPLIGNLHQLGRHTHRSLCDLSRRYGP--LMLLHLGRVPVLIVSSADMAQEILKTHDQAFANRPRSKLSQKLLYNNRDVASAPYGEYWRQMKSVCVIHLLSNKMVRSFRDVREEEITLMMAKIRKSSSLPFNVSKVLE-CLTNDVICRVALGRK-----YGGETDFKKLTDRLSE---LLGTFSIGSFVPWLA 218          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.515e-15
Identity = 61/209 (29.19%), Postives = 97/209 (46.41%), Query Frame = 2
Query:  215 KKGSKACSKPIPGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSS--VFADRPVKESAYSLMFNRA-IGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSV-FGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLA 829
            K+G K     +P P GLP IG++  +   PH +L           ++ F  G   V++  S  +A+++L +   VFA RP  +    L++++  +  APYG YWR ++ +   HLF  K + S    R +  S M+  I         L  IL   + N+++C V  GRK     Y   T+      L+E    LLG  +   ++PWLA
Sbjct:   24 KRGKKR--NTLPSPPGLPLIGNLHQLGRHPHRSLCSLSHRYGPLMLLHF--GRVPVLVVSSAELARDVLKTHDRVFASRPRSKIFEKLLYDKHDVASAPYGEYWRQMKSVCVLHLFSNKMVRSFREVREEEISLMMEKIRKSISLPVNLSKILVSLT-NDVICKVALGRK-----YGGETD---FKELMERLNKLLGTFSVGSYVPWLA 219          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.585e-15
Identity = 52/151 (34.44%), Postives = 78/151 (51.66%), Query Frame = 2
Query:  203 KHLYKKGSKACSKPIPGPRGLPFIGSMSLMAN--LPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSS--VFADRPVKESAYSLMFN-RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGS 640
            K + KK +   S P PGP  LP IG+M  +    LPHH L           +M   LGE   I+  SP  AKE++ +   +FA RP   +A  + ++ + + F PYG YWR LR+I A  L   K++ S +P R ++ +  +  +A+  GS
Sbjct:   23 KIVTKKSNSTPSLP-PGPWKLPIIGNMHNLVGSPLPHHRLRDLSAKYGS--LMHLKLGEVSTIVVSSPEYAKEVMKTHDHIFASRPYVLAAEIMDYDFKGVAFTPYGDYWRQLRKIFALELLSSKRVQSFQPIREEVLTSFIKRMATIEGS 170          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.585e-15
Identity = 57/198 (28.79%), Postives = 90/198 (45.45%), Query Frame = 2
Query:  248 PGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSSVF--ADRPVKESAYSLMFNRA-IGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGG--SAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWL 826
            P P GLP IG++  +  LPH +L           VM   LG    +I  +P  AK++L         RP  E    L +N   I F+ +  YW+ LR++    LFC K+INS +P +     +++  IA      +   L D     ++N +  +VFG  +   G   N +  +   LV E  ++LG  + SD  P++
Sbjct:   32 PSPPGLPIIGNLHQLGELPHQSLCKLSKKYGP--VMLLKLGRVPTVIVSTPETAKQVLKDYDLHCCSRPSLEGTRKLSYNYLDIAFSRFDDYWKELRKLCVEELFCNKRINSIQPIKEAEMEKLIDSIAESASQKTLVNLSDTFLSLNVNVICKAVFGVNFQ--GTVLNND--KFQDLVHEALEMLGSFSASDFFPYV 223          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.409e-15
Identity = 66/240 (27.50%), Postives = 105/240 (43.75%), Query Frame = 2
Query:  131 LCMALFWLAMALCFWAHPGGHAWGKHLYKKGSKACSKPI--PGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSS--VFADRPVKESAYSLMFNRA-IGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIAS--YGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLA 829
            + ++L +LA+AL F+           L K   K   KP   P P  LP IG++  + NLPH +L           ++   LG    +I  +  +A+EIL +   +FA RP   +A  + ++   + F+PYG YWR +R+I    L   K++NS    R +    M+  I+     G A  L ++L   S   +    FG+KY            + + L  E   L+G     D+ P  A
Sbjct:    3 ILVSLLFLAIALTFF-----------LLKLNEKREKKPNLPPSPPNLPIIGNLHQLGNLPHRSLRSLANELGP--LILLHLGHIPTLIVSTAEIAEEILKTHDLIFASRPSTTAARRIFYDCTDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEVGLMMERISQSCSTGEAVNLSELLLLLSSGTITRVAFGKKYE----GEEERKNKFADLATELTTLMGAFFVGDYFPSFA 225          
The following BLAST results are available for this feature:
BLAST of FC878113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
C78A3_SOYBN9.024e-7757.14Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
C78AB_ORYSJ1.076e-4542.91Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
C78A4_PINRA5.340e-4543.28Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C78A1_MAIZE3.032e-4040.68Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
C71A9_SOYBN4.710e-1731.16Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C71AP_ARATH8.035e-1729.86Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C71AQ_ARATH1.515e-1529.19Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71D9_SOYBN2.585e-1534.44Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71BA_ARATH2.585e-1528.79Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71A1_PERAE4.409e-1527.50Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA42CH07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA42CH07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878113 ID=FC878113; Name=FC878113; organism=Citrus clementina; type=EST; length=829bp
AAAAAAAAAAAAAAACGTAATCGCTGCAAATACTTCAATGGAATCTAAGA
TAGACTGTTTCTGGGTTTTGGCTCTTGCTTCCAAATGCAAATCTTTAACA
TTCCAAAACAATATTTTGGCGTCTATTTTACTTTGCATGGCTTTGTTTTG
GCTAGCCATGGCTTTGTGTTTCTGGGCACACCCTGGAGGCCATGCCTGGG
GTAAGCACTTATACAAGAAAGGCAGCAAAGCCTGCAGTAAGCCAATACCT
GGACCCCGAGGGTTACCATTTATTGGAAGCATGAGCCTCATGGCTAACCT
ACCTCACCACAACCTGGCTGCGGCAGCAAAAGCTTATAAAGCTAAACGGG
TCATGGCTTTTAGCCTCGGTGAGACTCGGGTTATTATTACATGCAGTCCA
AATGTGGCTAAAGAGATACTAAACAGCTCGGTATTTGCTGATCGTCCTGT
AAAAGAGTCTGCTTATAGTTTAATGTTCAATAGAGCAATAGGGTTTGCTC
CTTATGGAGTTTACTGGCGAACCCTAAGAAGAATCGCTGCAACTCATCTC
TTTTGTCCCAAGCAAATCAACTCCGCTGAGCCACAAAGGTCCGATATCGC
TTCCCAAATGGTCTCGATGATTGCATCTTACGGCGGATCAGCTTTTCGTC
TTCGTGACATACTAAAGCCAGCTTCGCTTAATAACATGATGTGTTCAGTG
TTTGGTCGCAAGTACGCCCTGCTGGGTTATTCTTCTAATACTGAAGCCCG
TCGACTGAGCCGCCTTGTTGAAGAAGGCTATGACCTGCTAGGAAAGCTCA
ATTTCTCTGATCACCTCCCTTGGCTTGCT
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