FC878121
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878121 vs. ExPASy Swiss-Prot
Match: DOF54_ARATH (Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4 PE=2 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 3.252e-32 Identity = 63/78 (80.77%), Postives = 66/78 (84.62%), Query Frame = 2 Query: 248 HQN-----HQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSKPKPNSESSA 466 HQN HQ+LKCPRC+SLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRK KRS + S SSA Sbjct: 40 HQNNILNHHQSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKRSKTKQVPSSSSA 117
BLAST of FC878121 vs. ExPASy Swiss-Prot
Match: DOF57_ARATH (Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.496e-29 Identity = 56/77 (72.73%), Postives = 64/77 (83.12%), Query Frame = 2 Query: 251 QNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSKPK------PNSESS 463 Q+ Q LKCPRC+S NTKFCYYNNY+LSQPRHFCK+CRRYWT+GG LRNVP+GGGCRKTK+S KP P+S SS Sbjct: 36 QDQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKKSIKPNSSMNTLPSSSSS 112
BLAST of FC878121 vs. ExPASy Swiss-Prot
Match: DOF17_ARATH (Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.150e-27 Identity = 51/65 (78.46%), Postives = 56/65 (86.15%), Query Frame = 2 Query: 260 QALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSKPKPNS 454 + LKCPRCDS NTKFCYYNNYNLSQPRHFCKNCRRYWTKGG LRN+PVGGG RK+ + S P+S Sbjct: 31 EQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNKRSGSSPSS 95
BLAST of FC878121 vs. ExPASy Swiss-Prot
Match: DOF22_ARATH (Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2 PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 7.016e-27 Identity = 50/68 (73.53%), Postives = 56/68 (82.35%), Query Frame = 2 Query: 263 ALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSKPKPNSESSA 466 ALKCPRCDS NTKFCY+NNYNL+QPRHFCK CRRYWT+GG LRNVPVGGGCR+ K+ S SS+ Sbjct: 93 ALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKGKSGNSKSSSSS 160
BLAST of FC878121 vs. ExPASy Swiss-Prot
Match: DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.164e-27 Identity = 50/70 (71.43%), Postives = 57/70 (81.43%), Query Frame = 2 Query: 245 PHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSKPKPNS 454 P AL+CPRCDS NTKFCYYNNY+L+QPR+FCK+CRRYWTKGG LRN+PVGGGCRK KRS+ S Sbjct: 48 PQPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRSTSSAARS 117
BLAST of FC878121 vs. ExPASy Swiss-Prot
Match: DOF56_ARATH (Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6 PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 1.163e-26 Identity = 50/74 (67.57%), Postives = 60/74 (81.08%), Query Frame = 2 Query: 245 PHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSKPKPNSESSA 466 PH + Q KCPRC+S +TKFCYYNNY+LSQPR+FCK CRRYWTKGG LRN+PVGGGCRK K+ S +S +S+ Sbjct: 68 PHDHPQ--KCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKPSSSNSSSSTSS 139 HSP 2 Score: 21.9422 bits (45), Expect = 1.163e-26 Identity = 10/26 (38.46%), Postives = 15/26 (57.69%), Query Frame = 3 Query: 171 CKTSTQSAEEGYSAAAVVTGGYGLIP 248 C T Q++ +AAA++ GG L P Sbjct: 42 CSTRPQASAVAVAAAALMDGGRRLRP 67
BLAST of FC878121 vs. ExPASy Swiss-Prot
Match: DOF11_ARATH (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1 PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 1.197e-26 Identity = 52/84 (61.90%), Postives = 63/84 (75.00%), Query Frame = 2 Query: 266 LKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSK--PKPNSESSAXXXXXXXXEAPAAGE 511 LKCPRCDS NTKFCYYNNYNL+QPRHFCK CRRYWT+GG LRNVPVGGGCR+ + K +S SS+ ++P++G+ Sbjct: 77 LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKNGNLKSSSSSSKQSSSVNAQSPSSGQ 160
BLAST of FC878121 vs. ExPASy Swiss-Prot
Match: DOF31_ARATH (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 2.666e-26 Identity = 53/69 (76.81%), Postives = 58/69 (84.06%), Query Frame = 2 Query: 260 QALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRK--TKRSSKPKPNSES 460 + LKCPRCDS NTKFCYYNNYNLSQPRHFCK+CRRYWTKGG LRNVPVGGG RK TKRS+ ++ S Sbjct: 27 EQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKNATKRSTSSSSSASS 95
BLAST of FC878121 vs. ExPASy Swiss-Prot
Match: DOF24_ARATH (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.940e-26 Identity = 47/67 (70.15%), Postives = 57/67 (85.07%), Query Frame = 2 Query: 263 ALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSKPKPNSESS 463 ALKCPRC+S NTKFCY+NNY+L+QPRHFCK CRRYWT+GG LRNVPVGGGCR+ +R+ N+ +S Sbjct: 88 ALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRTKSNSNNNNNS 154
BLAST of FC878121 vs. ExPASy Swiss-Prot
Match: PBF_MAIZE (Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.758e-26 Identity = 52/76 (68.42%), Postives = 61/76 (80.26%), Query Frame = 2 Query: 239 PHPHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSKPKPNSESSA 466 P P Q +ALKCPRCDS NTKFCYYNNY++SQPR+FCK CRRYWT GG LRNVP+GGGCRK K +S+ S +S+ Sbjct: 52 PRP-QLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGCRKNKHASRFVLGSHTSS 126 The following BLAST results are available for this feature:
BLAST of FC878121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878121 ID=FC878121; Name=FC878121; organism=Citrus clementina; type=EST; length=869bpback to top |