FC878131

Overview
NameFC878131
Unique NameFC878131
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length818
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12412 contig Ccv1_Contig12412:102..919. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y2723_BACLD (Putative metalloprotease BLi02723/BL03671 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=BLi02723 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.154e-18
Identity = 52/114 (45.61%), Postives = 76/114 (66.67%), Query Frame = 3
Query:  498 AVEDVGGFESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMS-QHVPELKLPIL------MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            A  + G  +  E+S+   NNE I+K+NKE+R +D+ TDV+S + +   E ++ I+      +LGDI+ISV+ A  QAEE GHSL+ E+  L VHG LHLLG+DH ++E+ E EM
Sbjct:   29 AAAEEGVADGAEVSVTIVNNEEIQKINKEYRGKDYPTDVISFALEEDGEGEVEIIGADMPPVLGDIIISVDKAREQAEEYGHSLMRELGFLTVHGFLHLLGYDH-MTEEEEKEM 141          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y254_SULSY (Putative metalloprotease SYO3AOP1_0254 OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=SYO3AOP1_0254 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.693e-17
Identity = 45/93 (48.39%), Postives = 65/93 (69.89%), Query Frame = 3
Query:  525 SIELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEK 803
            ++E+SI   +NE IR++NKEWR +D  TDVLS  Q    +     +LGD++IS+  A  QAEE G +L +E+  L+VHG+LHLLG+DHE +E+
Sbjct:   41 NVEISITLTDNERIREINKEWRGKDKPTDVLSFPQD-ETIGYKYRLLGDVIISLPYAKAQAEEIGLTLREEVLRLLVHGILHLLGYDHETNEE 132          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y1354_AQUAE (Putative metalloprotease aq_1354 OS=Aquifex aeolicus GN=aq_1354 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.693e-17
Identity = 50/110 (45.45%), Postives = 73/110 (66.36%), Query Frame = 3
Query:  468 KDSTYKTRDTAVEDVGGFESIELSILFCNNEFIRKLNKEWRDEDHATDVLS--MSQHVPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHE 791
            KD   K  + A+  +G   ++ELS+   +++ IR+LNK +R +D  TDVLS  M +     K+    LGD+VIS +TA RQA E GHSL +E++ L+VHG++HLLG+DHE
Sbjct:   22 KDKIEKWAELALSALG-LNNVELSVYITDDQEIRELNKTYRKKDKPTDVLSFPMGEEFGGYKI----LGDVVISQDTAERQARELGHSLEEEVKRLIVHGIVHLLGYDHE 126          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y207_PROMA (Putative metalloprotease Pro_0207 OS=Prochlorococcus marinus GN=Pro_0207 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.517e-17
Identity = 46/91 (50.55%), Postives = 62/91 (68.13%), Query Frame = 3
Query:  534 LSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLP---ILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEIS 797
            + +LF N+  IR++NKEWR +D +TDVLS       + LP    L LGDI++SVETA +QA+   HSL+ E+R L+ HG LHLLG+DH  S
Sbjct:   76 MGLLFTNDLSIRQMNKEWRKKDESTDVLSFPAIDEHIVLPPNQFLELGDIIVSVETAFKQAKIHNHSLMHELRWLVSHGFLHLLGWDHPSS 166          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y789_NAUPA (Putative metalloprotease NAMH_0789 OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=NAMH_0789 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.593e-17
Identity = 44/87 (50.57%), Postives = 65/87 (74.71%), Query Frame = 3
Query:  531 ELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHE 791
            ++ ++  ++E I++LN ++R++D ATDVLS     P   +P + LG IVIS++TA + AEE GHS+ DEIR+L +HGLLHLLG+DHE
Sbjct:   28 DIELILTDDEEIKELNSQFRNKDKATDVLSF----PLEAMPGMPLGSIVISIDTAKKGAEEFGHSVDDEIRLLFLHGLLHLLGYDHE 110          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y4154_BACWK (Putative metalloprotease BcerKBAB4_4154 OS=Bacillus weihenstephanensis (strain KBAB4) GN=BcerKBAB4_4154 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.593e-17
Identity = 55/143 (38.46%), Postives = 84/143 (58.74%), Query Frame = 3
Query:  444 MKLAFDSLKDSTYKTRDTAVEDVGGF-----------ESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMS-QHVPELKLPIL------MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            M L  D + D T + +D  +  + G            E  ELS+ F +NE IR++N+++RD+D  TDV+S + + + E ++ I+      MLGD++IS+  A  QAEE GHS   E+  L +HG LHLLG+DH ++E+ E EM
Sbjct:    1 MSLLIDFI-DETEEVKDEYISLIRGLVEKAAQMENIEEGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDH-MTEEDEKEM 141          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y2092_LEPBP (Putative metalloprotease LEPBI_I2092 OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=LEPBI_I2092 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.023e-16
Identity = 49/144 (34.03%), Postives = 76/144 (52.78%), Query Frame = 3
Query:  372 EDELPDDPEVLNIAEMLRLNAPTLMKLAFDSLKDSTYKTRDTAVEDVGGFESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEK 803
            + E+  DP + N  ++LR  AP  +                          S+ELSI   N+  + ++N+E R +   TDVLS   +     +P+ +LG++VIS+ET  +QA E GH L+DE   L+VHG+LH  G+DHE +E+
Sbjct:   17 QSEIFSDPVISNCEKILRFLAPEFL-------------------------HSLELSIYLVNDSLMAEINEERRGKPATTDVLSFPLYSEHPPIPVQILGEVVISMETCKKQAMEIGHGLVDEFYRLLVHGILHNFGYDHETNEE 135          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y2038_LEPBA (Putative metalloprotease LBF_2038 OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=LBF_2038 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.023e-16
Identity = 49/144 (34.03%), Postives = 76/144 (52.78%), Query Frame = 3
Query:  372 EDELPDDPEVLNIAEMLRLNAPTLMKLAFDSLKDSTYKTRDTAVEDVGGFESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEK 803
            + E+  DP + N  ++LR  AP  +                          S+ELSI   N+  + ++N+E R +   TDVLS   +     +P+ +LG++VIS+ET  +QA E GH L+DE   L+VHG+LH  G+DHE +E+
Sbjct:   17 QSEIFSDPVISNCEKILRFLAPEFL-------------------------HSLELSIYLVNDSLMAEINEERRGKPATTDVLSFPLYSEHPPIPVQILGEVVISMETCKKQAMEIGHGLVDEFYRLLVHGILHNFGYDHETNEE 135          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y4565_BACAC (Putative metalloprotease BAMEG_4565 OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=BAMEG_4565 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16
Identity = 47/106 (44.34%), Postives = 72/106 (67.92%), Query Frame = 3
Query:  522 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMS-QHVPELKLPIL------MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            +  ELS+ F +NE IR++N+++RD+D  TDV+S + + + E ++ I+      MLGD++IS+  A  QAEE GHS   E+  L +HG LHLLG+DH ++E+ E EM
Sbjct:   37 DGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGVEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDH-MTEEDEKEM 141          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y4547_BACAA (Putative metalloprotease BAA_4547 OS=Bacillus anthracis (strain A0248) GN=BAA_4547 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16
Identity = 47/106 (44.34%), Postives = 72/106 (67.92%), Query Frame = 3
Query:  522 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMS-QHVPELKLPIL------MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            +  ELS+ F +NE IR++N+++RD+D  TDV+S + + + E ++ I+      MLGD++IS+  A  QAEE GHS   E+  L +HG LHLLG+DH ++E+ E EM
Sbjct:   37 DGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGVEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDH-MTEEDEKEM 141          
The following BLAST results are available for this feature:
BLAST of FC878131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
Y2723_BACLD4.154e-1845.61Putative metalloprotease BLi02723/BL03671 OS=Bacil... [more]
Y254_SULSY2.693e-1748.39Putative metalloprotease SYO3AOP1_0254 OS=Sulfurih... [more]
Y1354_AQUAE2.693e-1745.45Putative metalloprotease aq_1354 OS=Aquifex aeolic... [more]
Y207_PROMA3.517e-1750.55Putative metalloprotease Pro_0207 OS=Prochlorococc... [more]
Y789_NAUPA4.593e-1750.57Putative metalloprotease NAMH_0789 OS=Nautilia pro... [more]
Y4154_BACWK4.593e-1738.46Putative metalloprotease BcerKBAB4_4154 OS=Bacillu... [more]
Y2092_LEPBP1.023e-1634.03Putative metalloprotease LEPBI_I2092 OS=Leptospira... [more]
Y2038_LEPBA1.023e-1634.03Putative metalloprotease LBF_2038 OS=Leptospira bi... [more]
Y4565_BACAC1.336e-1644.34Putative metalloprotease BAMEG_4565 OS=Bacillus an... [more]
Y4547_BACAA1.336e-1644.34Putative metalloprotease BAA_4547 OS=Bacillus anth... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA88DH09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA88DH09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878131 ID=FC878131; Name=FC878131; organism=Citrus clementina; type=EST; length=818bp
CAAAAGATTAAGCCTACATGCTCCCTCGCCTCTCCTCTGTACTCCGCGCT
CTCCCTTCCTCGACCGCTCCAATGGCGCGTATAATTTCACGAGCAACTCC
TCTACCTGTTACCCGTACCTCGTACGCCGCCATTTCCTTCCTCAACTCAC
CTTCGATCTCTTACAAAACGCACCGTTTGGATGCATCTTCTCCATCGAAT
TCGTCGCCGCTATTCGGTCGGGGATTCCGCGTGCTGTGTAGAAGAGAAGA
GGAGAGCGTGGTGCGATCGTCGCGAAAGGTTTTTGCTGAACAGAGAGGGT
ACCGCAAGGCGCGGAGACGAGTGGCGAAGAGCAAGCAGAAGGAATTGGAG
CTCAATGTCAGCATTTGCATCGAAGACGAGCTGCCTGATGATCCCGAAGT
ATTGAATATTGCAGAAATGCTTCGTCTTAATGCACCAACTTTAATGAAGT
TAGCATTTGATAGTTTGAAAGATTCGACATATAAAACAAGAGATACTGCC
GTAGAAGATGTTGGTGGGTTTGAAAGCATTGAGTTGTCTATACTCTTTTG
CAACAATGAGTTCATTCGTAAACTTAACAAAGAATGGAGGGATGAGGACC
ATGCCACTGATGTTCTCTCCATGTCACAACATGTCCCTGAACTCAAACTT
CCAATTCTTATGTTAGGTGACATTGTCATTTCTGTTGAGACTGCTGCAAG
ACAAGCAGAGGAAAGAGGGCACTCACTTCTTGATGAAATACGCATCCTTA
TGGTTCATGGCTTGTTGCATCTTTTGGGTTTCGATCATGAGATTAGCGAA
AAAGCTGAAGCAGAGATG
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