FC878156
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878156 vs. ExPASy Swiss-Prot
Match: SYWC_PONAB (Tryptophanyl-tRNA synthetase, cytoplasmic OS=Pongo abelii GN=WARS PE=2 SV=2) HSP 1 Score: 276.559 bits (706), Expect = 1.305e-73 Identity = 130/222 (58.56%), Postives = 169/222 (76.13%), Query Frame = 1 Query: 214 VSPWEV--SSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVG--GAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVXXXXXXXXXXXXGKDHLRCL 867 V PW V SS+ IDYDKLI +FG ++D+ L++R++R TG+ PH FLRRG+FF+HRD+N +LDAYE + FYLYTGRGPSSEA+H+GHL+PF+FTK+LQD F VPLVIQ+TDDEK +WK+L+++++ A ENAKDIIACGFD+ KTFIFSD DY+G FYKN+VK+ K VT+N+V GIFGFT D IGK+SFP +QA + ++CL Sbjct: 86 VDPWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHRFLRRGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCL 307
BLAST of FC878156 vs. ExPASy Swiss-Prot
Match: SYWC_HUMAN (Tryptophanyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=WARS PE=1 SV=2) HSP 1 Score: 276.559 bits (706), Expect = 1.305e-73 Identity = 130/222 (58.56%), Postives = 169/222 (76.13%), Query Frame = 1 Query: 214 VSPWEV--SSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVG--GAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVXXXXXXXXXXXXGKDHLRCL 867 V PW V SS+ IDYDKLI +FG ++D+ L++R++R TG+ PH FLRRG+FF+HRD+N +LDAYE + FYLYTGRGPSSEA+H+GHL+PF+FTK+LQD F VPLVIQ+TDDEK +WK+L+++++ A ENAKDIIACGFD+ KTFIFSD DY+G FYKN+VK+ K VT+N+V GIFGFT D IGK+SFP +QA + ++CL Sbjct: 85 VDPWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCL 306
BLAST of FC878156 vs. ExPASy Swiss-Prot
Match: SYWC_RAT (Tryptophanyl-tRNA synthetase, cytoplasmic OS=Rattus norvegicus GN=Wars PE=1 SV=2) HSP 1 Score: 274.633 bits (701), Expect = 4.959e-73 Identity = 133/222 (59.91%), Postives = 169/222 (76.13%), Query Frame = 1 Query: 214 VSPWEV--SSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGA--FYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVXXXXXXXXXXXXGKDHLRCL 867 V PW V SS+ IDYDKLI +FG ++D+ L++R++R TG+ PH FLRRG+FF+HRD+N ILDAYE + FYLYTGRGPSSEA+HLGHLVPF+FTK+LQD F VPLVIQ++DDEK +WK+L++E++ ENAKDIIACGFDV KTFIFSD +Y+G + FYKN+VK+ K VT+N+V GIFGFT D IGK+SFP VQA + ++CL Sbjct: 89 VDPWTVRTSSAKGIDYDKLIVQFGSSKIDKELINRIERATGQRPHRFLRRGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFDVPLVIQMSDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDVNKTFIFSDLEYMGQSPGFYKNVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIFRDRTDIQCL 310
BLAST of FC878156 vs. ExPASy Swiss-Prot
Match: SYWC_RABIT (Tryptophanyl-tRNA synthetase, cytoplasmic OS=Oryctolagus cuniculus GN=WARS PE=2 SV=3) HSP 1 Score: 274.248 bits (700), Expect = 6.476e-73 Identity = 131/222 (59.01%), Postives = 168/222 (75.68%), Query Frame = 1 Query: 214 VSPWEV--SSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVG--GAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVXXXXXXXXXXXXGKDHLRCL 867 V PW V SS+ IDYDKLI +FG ++D+ LV+R++R TG+ PH FLRRG+FF+HRD+N +LDAYE + FYLYTGRGPSSEA+H+GHL+PF+FTK+LQD F VPLV+Q++DDEK +WK+L++E+ ENAKDIIACGFDV KTFIFSD DY+G FYKN+VK+ K VT+N+V GIFGFT D IGK+SFP +QA G+ ++CL Sbjct: 89 VDPWTVRTSSAKGIDYDKLIVQFGSSKIDKELVNRIERATGQRPHRFLRRGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFDVPLVVQMSDDEKYLWKDLTLEQVYGYTLENAKDIIACGFDVNKTFIFSDLDYMGMSPGFYKNVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFHGQADIQCL 310
BLAST of FC878156 vs. ExPASy Swiss-Prot
Match: SYWC_BOVIN (Tryptophanyl-tRNA synthetase, cytoplasmic OS=Bos taurus GN=WARS PE=1 SV=3) HSP 1 Score: 273.863 bits (699), Expect = 8.459e-73 Identity = 131/222 (59.01%), Postives = 169/222 (76.13%), Query Frame = 1 Query: 214 VSPWEV--SSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVG--GAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVXXXXXXXXXXXXGKDHLRCL 867 V PW V SS+ IDYDKLI +FG ++D+ LV+R++R TG+ PH FLRRG+FF+HRD++ ILDAYE + FYLYTGRGPSSEA+H+GHL+PF+FTK+LQD F VPLVIQ+TDDEK +WK+L+++++ A ENAKDIIACGFD+ KTFIFSD DY+G FYKN+VK+ K VT+N+V GIFGFT D IGK+SFP +QA + ++CL Sbjct: 90 VDPWTVQTSSAKGIDYDKLIVRFGSSKIDKELVNRIERATGQRPHRFLRRGIFFSHRDMHQILDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMGMSPGFYKNVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDVQCL 311
BLAST of FC878156 vs. ExPASy Swiss-Prot
Match: SYWC_MOUSE (Tryptophanyl-tRNA synthetase, cytoplasmic OS=Mus musculus GN=Wars PE=1 SV=2) HSP 1 Score: 273.478 bits (698), Expect = 1.105e-72 Identity = 131/222 (59.01%), Postives = 169/222 (76.13%), Query Frame = 1 Query: 214 VSPWEV--SSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGA--FYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVXXXXXXXXXXXXGKDHLRCL 867 V PW V SS+ IDYDKLI +FG ++D+ L++R++R TG+ PH FLRRG+FF+HRD+N ILDAYE + FYLYTGRGPSSEA+HLGHLVPF+FTK+LQD F VPLVIQ++DDEK +WK+L++E++ ENAKDIIACGFD+ KTFIFSD +Y+G + FY+N+VK+ K VT+N+V GIFGFT D IGK+SFP VQA + ++CL Sbjct: 89 VDPWTVRTSSAKGIDYDKLIVQFGSSKIDKELINRIERATGQRPHRFLRRGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVFNVPLVIQMSDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDINKTFIFSDLEYMGQSPGFYRNVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIFRDRTDIQCL 310
BLAST of FC878156 vs. ExPASy Swiss-Prot
Match: SYWC_SCHPO (Tryptophanyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=wrs1 PE=1 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 2.467e-64 Identity = 119/226 (52.65%), Postives = 160/226 (70.80%), Query Frame = 1 Query: 211 VVSPWEVSSS------GKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWK-NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVXXXXXXXXXXXXGKDHLRCL 867 +V+PW+V S IDY++LI +FG +++ ++R ++LTG+ PH+ LRRG FF+HRD + ILD YE+ + FYLYTGRGPSS+++HLGH++PFMF K+LQD F+VPLVIQLTDDEK ++K +S+E+ QR ARENAKDIIA GFD KTFIF + YVGGAFY+N+V++AKC+T N+ FGFT D IGK+ F +QA G + CL Sbjct: 7 IVTPWDVKGSIVDGEEKGIDYERLIVQFGTRKITPEQLERFEKLTGKKPHLLLRRGAFFSHRDFDMILDRYEQKKPFYLYTGRGPSSDSMHLGHMIPFMFCKWLQDVFQVPLVIQLTDDEKFLFKQGVSLEDCQRFARENAKDIIAVGFDPKKTFIFMNSTYVGGAFYQNVVRIAKCITANQSKACFGFTDSDSIGKIHFASIQAAPSFSSSFPHIFNGAKDIPCL 232
BLAST of FC878156 vs. ExPASy Swiss-Prot
Match: SYWC_DICDI (Tryptophanyl-tRNA synthetase, cytoplasmic OS=Dictyostelium discoideum GN=trpS PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 9.374e-64 Identity = 111/200 (55.50%), Postives = 154/200 (77.00%), Query Frame = 1 Query: 211 VVSPWEVSSS--GKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQA 804 V++PWEV ++ G +DY KL+D+FG + + L+ R +++TG+ H FLRRG+FF+HRDL +ILD +E G+K++LYTGRGPSS +LH GHL+PF FTKYLQDAF VPLV+Q+T+DEK +WK++++EES + N KDIIA GFD+ KTFIFS+ +Y+ Y N++K+A+CV N++ IFGF D IGK +FPPVQA Sbjct: 15 VITPWEVEAAPGGSVDYMKLVDQFGSTVISEELIARFEKVTGKRAHHFLRRGIFFSHRDLKEILDHHESGKKWFLYTGRGPSSGSLHFGHLLPFTFTKYLQDAFNVPLVVQMTNDEKFLWKDMTLEESIKFTHNNVKDIIALGFDIQKTFIFSNLEYI-HHLYPNVLKIARCVNLNQIQNIFGFKESDAIGKFTFPPVQA 213
BLAST of FC878156 vs. ExPASy Swiss-Prot
Match: SYWC_YEAST (Tryptophanyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=WRS1 PE=1 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.004e-57 Identity = 106/205 (51.71%), Postives = 150/205 (73.17%), Query Frame = 1 Query: 211 VVSPWEVSS-------SGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWKN-LSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQ 801 VV+PW+V + IDYDKLI +FG + +++ + R +++TGR PH FLR+G+FF+ RD ILD YE+G+ F+LYTGRGPSS+++HLGH++PF+FTK+LQ+ F VPLVI+LTDDEK ++K+ L++ + + ARENAKDIIA GFD TFIFSD Y+GGAFY+ +V+V++ +T + +FGF D IGK F +Q Sbjct: 26 VVTPWDVEGGVDEQGRAQNIDYDKLIKQFGTKPVNEETLKRFKQVTGREPHHFLRKGLFFSERDFTKILDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFVFTKWLQEVFDVPLVIELTDDEKFLFKHKLTINDVKNFARENAKDIIAVGFDPKNTFIFSDLQYMGGAFYETVVRVSRQITGSTAKAVFGFNDSDCIGKFHFASIQ 230
BLAST of FC878156 vs. ExPASy Swiss-Prot
Match: SYW_ENCCU (Tryptophanyl-tRNA synthetase OS=Encephalitozoon cuniculi GN=ECU11_0530 PE=1 SV=2) HSP 1 Score: 211.846 bits (538), Expect = 3.947e-54 Identity = 94/199 (47.24%), Postives = 140/199 (70.35%), Query Frame = 1 Query: 214 VSPWEVSSSGK------IDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFP 792 ++PW+V IDYDK+I++FGC++ +Q+L DR+++L+G+P H F RRG+ FAHRD N +LD FYLYTGRGPSS+ +H+GH +PF+ KY+QDAFK+ LVIQ+TDDEK +WK++ +E++ REN KDI+A GFD T+IFS+ + F +N++K++K + N+ + +FGF +IG+V FP Sbjct: 6 ITPWDVEVVSTDEVPVAIDYDKIINQFGCEKFNQALADRLEKLSGKPAHYFFRRGIVFAHRDFNLLLDEIANNRPFYLYTGRGPSSKTMHIGHTIPFLLCKYMQDAFKIRLVIQITDDEKFLWKSMRLEDAMAYGRENIKDIVALGFDPKLTYIFSNVE-ASHHFEENILKISKTINLNEAIKVFGFDMSSNIGQVGFP 203 The following BLAST results are available for this feature:
BLAST of FC878156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878156 ID=FC878156; Name=FC878156; organism=Citrus clementina; type=EST; length=868bpback to top |