FC878158
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878158 vs. ExPASy Swiss-Prot
Match: AFR_ARATH (F-box protein AFR OS=Arabidopsis thaliana GN=AFR PE=1 SV=2) HSP 1 Score: 260.381 bits (664), Expect = 9.342e-69 Identity = 130/213 (61.03%), Postives = 157/213 (73.71%), Query Frame = 2 Query: 218 TQPLIPGLPDEIGELCLLHVPYPYQALVRSVSYSWNKAITDPGFALCKKSLSLSLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMP--CPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVT 850 +QPLI GLP++I ELCLL +PYPY AL RSVS SWNK IT+P F K+SLS+S PYLF+F+F+K TARIQWQ+LD SGRWFVLPPMP K P A +C S+PRQGKLFVLGG D +S ++Y A TN+W SPM++PR++F SGNVNGKIMAVGG+ E T VE YDP++DTWT KL M LA+YDSAV+G +M VT Sbjct: 25 SQPLISGLPNDIAELCLLRLPYPYHALYRSVSSSWNKTITNPRFLFSKQSLSISSPYLFVFAFNKSTARIQWQSLDLASGRWFVLPPMPNSFTKISSPHALSCASMPRQGKLFVLGG--GDVN---RSAVVYTALTNRWSCISPMMSPRTYFVSGNVNGKIMAVGGSVGGNGEATTEVESYDPDNDTWTVVKKLPMVLAKYDSAVIGKEMCVT 232
BLAST of FC878158 vs. ExPASy Swiss-Prot
Match: FBK17_ARATH (F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana GN=At1g30090 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.522e-39 Identity = 81/211 (38.39%), Postives = 116/211 (54.98%), Query Frame = 2 Query: 221 QPLIPGLPDEIGELCLLHVPYPYQALVRSVSYSWNKAI-TDPGFALCKKSLSLSLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVT 850 +PLIPGLPD++ CLL VP +SV W+ T F +K P+LF+ F + T +IQW+ LD R+ W +P MPC VCP F S+PR+G +FV GGM SD++ P+ + Y N W + + M+T RSFFASG ++G I A GG A++ E + E +P W + + +A YD+AV+ K+ VT Sbjct: 51 EPLIPGLPDDVALNCLLRVPVQSHVSSKSVCKRWHLLFGTKETFFAKRKEFGFKDPWLFVVGFSRCTGKIQWKVLDLRNLTWHEIPAMPCRDKVCPHGFRSVSMPREGTMFVCGGMVSDSDCPLDLVLKYDMVKNHWTVTNKMITARSFFASGVIDGMIYAAGGNAADLYE-LDCAEVLNPLDGNWRPVSNMVAHMASYDTAVLNGKLLVT 260
BLAST of FC878158 vs. ExPASy Swiss-Prot
Match: FBK22_ARATH (F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana GN=At1g55270 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.110e-20 Identity = 61/208 (29.33%), Postives = 91/208 (43.75%), Query Frame = 2 Query: 224 PLIPGLPDEIGELCLLHVPYPYQALVRSVSYSWNKAITDPGFALCKKSLSLSLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYV 847 PL+PGLPD++ CL+ VP +R V W + + F +K L +S ++++F + +I W DP S W LPP+P + F C L G L G + M+ I Y A TN+W A ML R FF +N + GG I T+ + E YDP + W+ A + + V K ++ Sbjct: 77 PLLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYVFKRDRD-GKISWNTFDPISQLWQPLPPVPREYSEAV-GFGCAVL--SGCHLYLFGGKDPLRGSMRRVIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGIQRTLRSAEVYDPNKNRWSFIADMSTAMVPLIGVVYDKKWFL 280
BLAST of FC878158 vs. ExPASy Swiss-Prot
Match: FBK28_ARATH (F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana GN=At1g67480 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.852e-17 Identity = 59/210 (28.10%), Postives = 94/210 (44.76%), Query Frame = 2 Query: 224 PLIPGLPDEIGELCLLHVPYPYQALVRSVSYSWNKAITDPGFALCKKSLSLSLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT--NQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYV 847 PLIPGLPD++ + CL VP + SV W + F ++ + +L++ + + +W+ +D + LPPMP P + GKL V+ G + + S +Y+ T N W + + R FA VNG + VGG G + E++++ E YDPE+ TWT LR ++ K+YV Sbjct: 38 PLIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTMNAGGKDNRWEVMDCLGQKLSSLPPMPGPAKTGFKVVVV-----DGKLLVIAGCCMINGSLVASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVD-GESLSSAEVYDPETCTWTFIESLRRPRWGCFASAFNGKLYV 241
BLAST of FC878158 vs. ExPASy Swiss-Prot
Match: FBK5_ARATH (F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana GN=At1g16250 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.084e-16 Identity = 55/197 (27.92%), Postives = 93/197 (47.21%), Query Frame = 2 Query: 221 QPLIPGLPDEIGELCLLHVPYPYQALVRSVSYSWNKAITDPGFALCKKSLSLSLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCP----QAFACTSLPRQGKLFVLGGMRSDTET--PMQSTIMYRATTN------QWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTW 775 Q +IPGLPD++ C+ + + Y ++ VS W + ++ K S +LF+ + ++ QW A DP + RW P+P +AV FAC + L V+GG + + + P Q ++ + QW++ + M TPR+ FA +V+GK+ GG + + + E YDP +D W Sbjct: 6 QSIIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVLT---ERSKNQWVAYDPEADRWH---PLPRTRAVQDGWHHSGFACVCV--SNCLLVIGGCYAPSVSSFPHQKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRGIPSAEVYDPVADRW 194
BLAST of FC878158 vs. ExPASy Swiss-Prot
Match: SKI30_ARATH (F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana GN=SKIP30 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 4.119e-16 Identity = 62/199 (31.16%), Postives = 84/199 (42.21%), Query Frame = 2 Query: 227 LIPGLPDEIGELCLLHVPYPYQALVRSVSYSWNKAITDPGFALCKKSLSLSLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPM----------QSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKL 793 L+ G+P+ + CL HVP + VS SW AI +K L S L + +F WQ P RW LP +P A T+ G LFVLGG SD +P+ Y QW + ML PR+ FA + GKI+ GG ++++ E YDPE+D WT+ L Sbjct: 11 LLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCVCAFDPENI---WQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTT---AGMLFVLGG-GSDAVSPVTGDHDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGF-TTCRKSISGAEMYDPENDVWTSIPDL 201
BLAST of FC878158 vs. ExPASy Swiss-Prot
Match: FK125_ARATH (F-box/kelch-repeat protein OR23 OS=Arabidopsis thaliana GN=OR23 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.495e-13 Identity = 62/209 (29.67%), Postives = 91/209 (43.54%), Query Frame = 2 Query: 227 LIPGLPDEIGELCLLHVPYPYQALVRSVSYSWNKAITDPGFALCKKSLSLS----LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPC-PKAVCPQAFACTSLPRQGKLFVLGGMRSDTET-------PMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGK----IMAVGGTGANI----NETMTAVECYDPESDTWTTAAKL 793 LIPGL +++G L L VPYP+ + ++S SW ++ + S S L +L P+ + DP + W LP MPC P F +L ++VLGG DT + P S Y + W+ SPM++PR FA + G I+A GG+ + M++VE YD E D W +L Sbjct: 38 LIPGLSNDVGRLILSFVPYPHISRIKSTCKSWYAFLSSKTLISLRHSRDNSNTNNLSHLLCIFPQDPSISPPF-LFDPVTLSWRSLPLMPCNPHVYGLCNFVAVALGPY--VYVLGGSAFDTRSYPLDVPLPTSSVFRYSFVKSVWERLSPMMSPRGSFACAAMPGSCGRIIVAGGGSRHTLFGAAGSRMSSVEMYDVEKDEWRVMNEL 243
BLAST of FC878158 vs. ExPASy Swiss-Prot
Match: SKIP4_ARATH (F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana GN=SKIP4 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.050e-11 Identity = 58/210 (27.62%), Postives = 91/210 (43.33%), Query Frame = 2 Query: 227 LIPGLPDEIGELCLLHVPYPYQALVRSVSYSWNKAITDPGFALCKKSLSLSLPYLFIFSFHKPTARIQWQALDPRSGR--WFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQW-QLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYV 847 LI G+PD+I + CL VP Y ++ VS W + + +L+ +++ + + L+P S R W + P FA +LFVLGG E Y A N W + P+ T R +FA ++GKI+A+GG G N N T + YDP + T + + + + DS VM ++Y+ Sbjct: 21 LISGVPDDISKSCLARVPREYHMAMKCVSRRWRDFVCSDEMCDYRNEFNLAESWIYALC-RDISGGVFLHMLNPFSSRRSWKRINDYPYIPMREGMGFAVLGK----RLFVLGGC-GWLEDATDEIYCYDAAMNTWFDVVPPLSTKRCYFACETLDGKIIAIGGLGLNPNAKRT-WDIYDPLTRTCKSCSDVNIVPEMEDSFVMDGRIYI 223
BLAST of FC878158 vs. ExPASy Swiss-Prot
Match: FBK16_ARATH (Putative F-box/kelch-repeat protein At1g27420 OS=Arabidopsis thaliana GN=At1g27420 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.210e-11 Identity = 49/218 (22.48%), Postives = 88/218 (40.37%), Query Frame = 2 Query: 215 NTQPLIPGLPDEIGELCLLHVPYPYQALVRSVSYSWNKAITDPGFALCKKSLSLSLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLG--------GMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVMGSKMY 844 ++ P+IPGL D++ ELC+ +P + V W + FA +K +L + + + W+ D + +PP+P P + F L GK+ G G+ S T + + N W+ + M PR FA VNG + + G + +++ E Y+P+++ W+ + R + SK+Y Sbjct: 6 SSSPIIPGLTDDVAELCVSKIPRSSFQITSQVCRRWRSFLRSQHFAAVRKLTGTVEEFLCVLMESECGRDVYWEVFDASGNKLGQIPPVPGP---LKRGFGVAVLD-GGKIVFFGGYTEVEGSGINSTTVSASADVYEFDPANNSWRKLAGMNIPRYNFAFAEVNGLLYVIRGYSTD-TYSLSNAEVYNPKTNQWSLMHCPNRPVWRGFAFAFSSKLY 218 The following BLAST results are available for this feature:
BLAST of FC878158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878158 ID=FC878158; Name=FC878158; organism=Citrus clementina; type=EST; length=852bpback to top |