FC878164
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYTM_ARATH (Threonyl-tRNA synthetase, mitochondrial OS=Arabidopsis thaliana GN=THRRS PE=2 SV=3) HSP 1 Score: 444.891 bits (1143), Expect = 3.014e-124 Identity = 207/271 (76.38%), Postives = 239/271 (88.19%), Query Frame = 3 Query: 108 NQVKDEEYLNKVIPKRISLFQSLQSEQQARLQSLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 N KDE YL+ VIPKRI LF+ +Q+ Q L+SLPHDPIK+TLPDG+VKEGK+WET+PMDIA ISK LA +ALIS V+ VLWDM RPLE DC L+LF FDSD+GRDT WHSSAHILGQA+EQ+YGC+LCIGPCTTRGEGFYYD FYG+LGL+ +HF SI++ A KAAKE QPFERIEVT+DQALEMFS+NNFKVE+IN LPAD TITVYRCGPLVDLCRGPHIPNTSFVK F CL+ASSAYW+G+KDRESLQRVYGISYPD+K +K+Y++ Sbjct: 37 NHPKDEAYLSAVIPKRIKLFEQIQANQLENLKSLPHDPIKVTLPDGNVKEGKKWETTPMDIAAQISKGLANSALISAVDDVLWDMNRPLEGDCKLELFKFDSDKGRDTLWHSSAHILGQALEQEYGCQLCIGPCTTRGEGFYYDGFYGELGLSDNHFPSIEAGAAKAAKEAQPFERIEVTKDQALEMFSENNFKVELINGLPADMTITVYRCGPLVDLCRGPHIPNTSFVKAFKCLRASSAYWKGDKDRESLQRVYGISYPDQKQLKKYLQ 307
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYTC1_DICDI (Probable threonyl-tRNA synthetase 1, cytoplasmic OS=Dictyostelium discoideum GN=thrS1 PE=3 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 3.265e-78 Identity = 139/258 (53.88%), Postives = 191/258 (74.03%), Query Frame = 3 Query: 144 IPKRISLFQSLQSEQQARLQSLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGV-LWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEY 914 + +RI +++SL+++ L+ + +PI +TLPDG V G + +T+P DIA+GIS+ LA + + S VNG +WD++RPLEADC+L+L FDS+EG+ TFWHSSAHILGQA+E+ YG +LCIGP T+ EGFYYD GD ++ + +K I+ A K +EKQPFER+ V RD AL MF N +K EII+ +P + T+++YRCG LVDLCRGPH+PNTS++K F K SSAYW G + + LQRVYGIS+PDKK ++EY Sbjct: 50 VKERIEIWESLKAKHLESLKDMKEEPINVTLPDGKVVAGIKNKTTPYDIAKGISRGLADSIVSSKVNGEQIWDISRPLEADCNLQLCKFDSEEGKKTFWHSSAHILGQAMERIYGGQLCIGPATS--EGFYYDMAMGDKIVSAEDYKLINEVAQKIVQEKQPFERLAVPRDIALTMFKFNKYKTEIISKIPQEDTVSLYRCGTLVDLCRGPHVPNTSYIKSFAVTKNSSAYWLGKAENDDLQRVYGISFPDKKQMEEY 305
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYTC_CAEEL (Threonyl-tRNA synthetase, cytoplasmic OS=Caenorhabditis elegans GN=trs-1 PE=2 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 5.049e-71 Identity = 129/257 (50.19%), Postives = 170/257 (66.15%), Query Frame = 3 Query: 144 IPKRISLFQSLQSEQQARLQSLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEY 914 I +RI L+ L++E A + + +PI+ITLPDG + EGK W T+P +IA+ ISK LA A+I+ VNG +WD+ RP E + L+L FD DE + FWHSSAH+LG+A+E+ G LC GP EGFYYD ++ + + PD F ID A K+KQ FER+E+T++ LEMF N FKV II + TVYRCGPL+DLCRGPH+ +T VK K SS+YW G D ESLQR+YGIS+PD K +KE+ Sbjct: 56 IEERIKLWDKLKAEYDAEIAAKESEPIQITLPDGKIHEGKTWRTTPFEIAERISKGLAEAAVIAKVNGAVWDLDRPFEGNAKLELLKFDDDEAKQVFWHSSAHVLGEAMERYCGGHLCYGPPIQ--EGFYYDMWHENRTICPDDFPKIDQIVKAAVKDKQKFERLEMTKEDLLEMFKYNEFKVRIITEKIHTPKTTVYRCGPLIDLCRGPHVRHTGKVKAMAITKNSSSYWEGKADAESLQRLYGISFPDSKQLKEW 310
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYTC_SCHPO (Threonyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=ths1 PE=2 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.986e-67 Identity = 129/259 (49.81%), Postives = 170/259 (65.64%), Query Frame = 3 Query: 144 IPKRISLFQSLQSEQQARLQSLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEGFYYD-AFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEII-NDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEY 914 I R+ LF LQ E + L + P + I ITLPDG V +G WET+P+ IA ISK LA +++VNG WD+TRPLEA C LKL F+ EG+ FWHSSAHILG+A E + C LCIGP T EGF+Y+ + D + SI+S A +A K+KQPFER+ ++++ LEMF N +K II +P + TVYRCGPL+DLC GPH+P+T +K F K SS+Y+ G+ +SLQRVYGIS+PD K ++EY Sbjct: 23 IQHRLDLFDKLQKEYKESLATKPREEIDITLPDGKVIKGTSWETTPISIAASISKGLADRVTVAIVNGEPWDLTRPLEASCTLKLCDFNDPEGKRVFWHSSAHILGEATELSFHCHLCIGPPT--DEGFFYEMGIDNGRVITNDDYSSIESYAKQAIKQKQPFERLVISKEGLLEMFRYNKYKQYIIQTKIPDGASTTVYRCGPLIDLCTGPHVPHTGRIKSFAVTKNSSSYFLGDAKNDSLQRVYGISFPDNKQMQEY 279
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYTC2_XENTR (Probable threonyl-tRNA synthetase 2, cytoplasmic OS=Xenopus tropicalis GN=tarsl2 PE=2 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 5.777e-67 Identity = 125/260 (48.08%), Postives = 170/260 (65.38%), Query Frame = 3 Query: 144 IPKRISLFQSLQSEQQARLQSLP---HDPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEY 914 I R++L+++L++E A L + PIKITL DG +G+ W+T+P +A GISK LA N +I+ VN LWD+ RPLE D +++L FDS+E + +WHSSAHILG+ +E YG LC GP G FYYD + G++ + F S+++ KEKQPFER+EV++D LEMF N FK I+N+ T TVYRCGPL+DLCRGPH+ +T +K K SS YW G D E+LQR+YGIS+PD K +KE+ Sbjct: 145 IKDRLALYETLKNEHDALLAARAAHQSKPIKITLADGKQVDGESWKTTPYQVAIGISKGLADNVVIAKVNNELWDLDRPLEQDSNVELLKFDSEEAQAVYWHSSAHILGETMENFYGGCLCYGPPIENG--FYYDMYLDGRGVSSNEFPSLENMCKAIIKEKQPFERLEVSKDLLLEMFKYNKFKCRILNEKVDTPTTTVYRCGPLIDLCRGPHVRHTGKIKTLKIYKNSSTYWEGRADMETLQRIYGISFPDSKLMKEW 402
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYTC_RAT (Threonyl-tRNA synthetase, cytoplasmic OS=Rattus norvegicus GN=Tars PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.858e-65 Identity = 122/266 (45.86%), Postives = 172/266 (64.66%), Query Frame = 3 Query: 126 EYLNKVIPKRISLFQSLQSEQQARLQ---SLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEY 914 EY+N R+ ++ L++E + L + PIK+TLPDG + + W+T+P IA GIS+ LA N +++ VN V+WD+ RPLE DC L+L F+ +E + +WHSSAHI+G+A+E+ YG LC GP G FYYD + + G++ + F S+++ K KEKQ FER+EV ++ LEMF N FK I+N+ T TVYRCGPL+DLCRGPH+ +T +K K SS YW G D E+LQR+YGIS+PD K +KE+ Sbjct: 24 EYINT----RLDMYHKLKAEHDSILAEKAAKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRPLETDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIENG--FYYDMYLEEGGVSSNDFSSLETLCKKIIKEKQTFERLEVKKETLLEMFKYNKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKTLKIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEW 283
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYTC_MOUSE (Threonyl-tRNA synthetase, cytoplasmic OS=Mus musculus GN=Tars PE=1 SV=2) HSP 1 Score: 249.595 bits (636), Expect = 1.858e-65 Identity = 122/266 (45.86%), Postives = 172/266 (64.66%), Query Frame = 3 Query: 126 EYLNKVIPKRISLFQSLQSEQQARLQ---SLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEY 914 EY+N R+ ++ L++E + L + PIK+TLPDG + + W+T+P IA GIS+ LA N +++ VN V+WD+ RPLE DC L+L F+ +E + +WHSSAHI+G+A+E+ YG LC GP G FYYD + + G++ + F S+++ K KEKQ FER+EV ++ LEMF N FK I+N+ T TVYRCGPL+DLCRGPH+ +T +K K SS YW G D E+LQR+YGIS+PD K +KE+ Sbjct: 51 EYINT----RLDMYNKLKAEHDSILAEKAAKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRPLETDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIENG--FYYDMYLEEGGVSSNDFSSLETLCKKIIKEKQTFERLEVKKETLLEMFKYNKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKTLKIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEW 310
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYTC_BOVIN (Threonyl-tRNA synthetase, cytoplasmic OS=Bos taurus GN=TARS PE=2 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 4.140e-65 Identity = 122/266 (45.86%), Postives = 170/266 (63.91%), Query Frame = 3 Query: 126 EYLNKVIPKRISLFQSLQSEQQARLQSLPHD---PIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEY 914 EY+N R+ ++ L++E + L PIK+TLPDG + + W+T+P IA GIS+ LA N +I+ VN +WD+ RPLE DC L+L F+ +E + +WHSSAHI+G+A+E+ YG LC GP G FYYD + + G++ + F S+++ K KEKQ FER+EV ++ LEMF N FK I+N+ T TVYRCGPL+DLCRGPH+ +T +K K SS YW G D E+LQR+YGIS+PD K +KE+ Sbjct: 52 EYINT----RLEMYNKLKAEHDSILAEKAEKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNKAVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIENG--FYYDMYLEEGGVSSNDFSSLETLCKKIIKEKQAFERLEVKKETLLEMFKYNKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKTLKIHKNSSTYWEGKSDMETLQRIYGISFPDPKMLKEW 311
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYTC_HUMAN (Threonyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=TARS PE=1 SV=3) HSP 1 Score: 246.514 bits (628), Expect = 1.573e-64 Identity = 119/257 (46.30%), Postives = 166/257 (64.59%), Query Frame = 3 Query: 153 RISLFQSLQSEQQARLQSLPHD---PIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEY 914 R+ ++ L++E + L PIK+TLPDG + + W+T+P IA GIS+ LA N +I+ VN V+WD+ RPLE DC L+L F+ +E + +WHSSAHI+G+A+E+ YG LC GP G FYYD + + G++ + F S+++ K KEKQ FER+EV ++ L MF N FK I+N+ T TVYRCGPL+DLCRGPH+ +T +K K SS YW G D E+LQR+YGIS+PD K +KE+ Sbjct: 57 RLEMYNILKAEHDSILAEKAEKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIENG--FYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETLLAMFKYNKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEW 311
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYTC2_MOUSE (Probable threonyl-tRNA synthetase 2, cytoplasmic OS=Mus musculus GN=Tarsl2 PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.573e-64 Identity = 120/285 (42.11%), Postives = 178/285 (62.46%), Query Frame = 3 Query: 72 TNLRRIRAMPSPNQVKDEEYLNKVIPKRISLFQSLQSEQQ----ARLQSLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEY 914 T +R++ +VK + I +R+ LF++L+++ Q + + ++ I + + G +G+RW+T+P +A GISK LA + +I+ VNGVLWD+ RPLE D ++L FD++E + +WHSSAHILG+A+E YG LC GP G FYYD F D ++ ++++ KEKQPFER+EV++D LEMF N FK I+ + T TVYRCGPL+DLC+GPH+ +T +K K SS YW GN + E+LQR+YGIS+PD K +K++ Sbjct: 100 TKKKRLKQSEPGREVKQPNF----IKERLQLFETLKTDHQLLPATQEKKNTNNVISVRVAGGKTVQGERWKTTPYQVAAGISKELAEHTVIAKVNGVLWDLDRPLEGDSTVELLMFDNEEAQAVYWHSSAHILGEAMELYYGGHLCYGPPIENG--FYYDMFIEDRVVSSTELSALENICKTIIKEKQPFERLEVSKDTLLEMFKYNKFKCRILKEKVDTPTTTVYRCGPLIDLCKGPHVRHTGKIKAIKIFKNSSTYWEGNPEMETLQRIYGISFPDSKMMKDW 378 The following BLAST results are available for this feature:
BLAST of FC878164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878164 ID=FC878164; Name=FC878164; organism=Citrus clementina; type=EST; length=922bpback to top |