FC878167
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878167 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.132e-28 Identity = 73/230 (31.74%), Postives = 119/230 (51.74%), Query Frame = 2 Query: 182 ESKKLWIVAAPAIFTRFSSFGLNVVSQAFIGHIGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAXXXXXXXXXXXXXXVALGQEENIAEVAGTISFMLIPVLFAFIISFTCQMYLQAQSRNMIISYLAACXXXXXXXXXXXXTMKLNFGLPGALGSTILAYW-IPNLGQLLFVICGGCPQTWKGFSFAAFKDLWPVVKLS 868 ESK LW ++ +I ++ L+ V+ F GH+G+ QLA S+ + A GI+LGMASA++T+CGQA+GA+QY +GI QR+ ++ A +GQ IA + +IP ++AF ++ Q +LQAQ+ ++Y++ T L+FGL GA ++W + + + ++ C +TW GFS AF+ +WP KL+ Sbjct: 51 ESKLLWTLSGASIVVSVLNYMLSFVTVMFTGHLGSLQLAGASIATVGIQGLAYGIMLGMASAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQRFLQAQNIVNPLAYMSLGVFLLHTLLTWLVTNVLDFGLLGAALILSFSWWLLVAVNGMYILMSPNCKETWTGFSTRAFRGIWPYFKLT 280
BLAST of FC878167 vs. ExPASy Swiss-Prot
Match: YJ2D_SCHPO (Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe GN=SPCC4B3.13 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.277e-13 Identity = 67/268 (25.00%), Postives = 111/268 (41.42%), Query Frame = 2 Query: 89 RMVGEIKEKLLGNTEEND-----VDGQVKFRQKLWVESKKLWI-VAAPAIFTRFSSFGLNVVSQAFIGHIGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAXXXXXXXXXXXXXXVALGQEENIAEVAGTISFMLIPVLFAFIISFTCQMYLQAQSRNMIISYLAACXXXXXXXXXXXXTMK--LNFGLPGALGSTILAYWIPNLGQLLFVICGGCPQTWKGFSFAAFKDLWPVVKLS 868 R ++ L TEEN+ + Q F K W + L I A P + T +G V + +GH+G T+LAA SL A I G+ SAL+T+ Q+FG+ Y M+G++LQR +L + + L Q+ A +++ A+ + + +LQ Q ++Y+ A + FG GA + L W +++++ Q W GFS A K+ P+ +L+ Sbjct: 59 RPATDVSYGALEETEENESIASGLSVQEDFNSKAWWKELTLLIKFATPVVLTSLLQYGEVVTTVFSLGHLGKTELAAASLSNMTATITAFAIYQGIVSALDTVGTQSFGSGNYEMVGLHLQRILAILLLIQFPIFLIWWKIEGILLFLRQDPLTCMFAAKYMRVMMLASPAYALFEALKRFLQVQGIFHPVTYILAIVVPINIFLNYLFVWSPWVGFGFLGAPVAVALTLWSACAVLIIYIMKVNGRQAWGGFSREALKNWGPLCRLA 326
BLAST of FC878167 vs. ExPASy Swiss-Prot
Match: YL47_SCHPO (Uncharacterized transporter C323.07c OS=Schizosaccharomyces pombe GN=SPAC323.07c PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.668e-13 Identity = 55/202 (27.23%), Postives = 87/202 (43.07%), Query Frame = 2 Query: 269 IGHIGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAXXXXXXXXXXXXXXVALGQEENIAEVAGTISFMLIPVLFAFIISFTCQMYLQAQSRNMIISYLA--ACXXXXXXXXXXXXTMKLNFGLPGALGSTILAYWIPNLGQLLFVICGGCPQTWKGFSFAAFKDLWPVVKLS 868 +GH+G LAA SL A I G+ S+L+TL QAFGA + + + IYLQR ++L + + L Q+ +A + G + I + + + YLQAQ I+Y+ A + FG GA + +W ++ +L++ P W GFS A K+L P++ S Sbjct: 119 LGHLGKEYLAASSLSTMTAAISAFSIFQGVISSLDTLATQAFGANKPYNVAIYLQRCLLILAVLHIPVALIWLNLEHILIFLHQDPMVAHLCGRYMRVFILAAPGYAVFEALKRYLQAQGIFTPITYVLCFAAPLNILLNYLLVWHPTIGFGFLGAPVAVATTFWFQSICLILYICFSSTPIPWPGFSRQALKNLSPMLHFS 320
BLAST of FC878167 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.846e-13 Identity = 54/237 (22.78%), Postives = 106/237 (44.73%), Query Frame = 2 Query: 170 KLWVESKKLWIVAAPAIFTRFSSFGLNVVSQAFIGHIGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAXXXXXXXXXXXXXXVALGQEENIAEVAGTISFMLIPVLFAFIISFTCQMYLQAQS---RNMIISYLAACXXXXXXXXXXXXTMKLNFGLPGALGSTILAYWIPNLGQLLFVICGGC-PQTWKGFSFAAFKDLWPVVKLS 868 ++W E+++L +AAPA ++ F +++VS F GH+G +L A SL T++ + G+A A +TL Q FG ++GI LQR ++L + + Q+ ++++ + +P L A + YLQ Q ++ ++A L G+ G+ + ++ +I + L+++ TW G+S A F++ ++L+ Sbjct: 44 EVWQEAQQLLALAAPAFLSQLMIFLISIVSSIFCGHLGKVELDAVSLAITIINITGVAVGTGLAGACDTLISQTFGGSNLKLVGIILQRGILILLLFCFPCWALLINTESILLLFRQDPEVSKLTQIYVLIFLPALPAAFLYQLLAKYLQNQGIIYPQVLTGFIA---NIFNALFNYILLYVLGLGVMGSACANTVSQFIQMILLFLYIVWRRLYADTWGGWSQACFEEWGAFIRLA 277
BLAST of FC878167 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.367e-12 Identity = 43/148 (29.05%), Postives = 71/148 (47.97%), Query Frame = 2 Query: 182 ESKKLWIVAAPAIFTRFSSFGLNVVSQAFIGHIGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAXXXXXXXXXXXXXXVALGQEENIAEVAGTISFMLIPVLFAFIISFTCQMYLQAQ 625 E+ L +A P + F +++VS F GH+G +L A +L +V+ + G+ASA +TL Q+FG K +G+ LQR ++L +C + L Q+ ++A +A + IP L A + YLQ+Q Sbjct: 43 EAAALVALAGPVFLAQLMIFLISIVSSIFCGHLGKVELDAVTLAVSVVNVTGISVGTGLASACDTLMSQSFGGKNLKRVGVILQRGILILLLCCFPCWAIFLNTERLLLLLRQDPDVARLAQVYVMICIPALPAAFLFQLQTRYLQSQ 190
BLAST of FC878167 vs. ExPASy Swiss-Prot
Match: S47A2_PONAB (Multidrug and toxin extrusion protein 2 OS=Pongo abelii GN=SLC47A2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.934e-11 Identity = 51/237 (21.52%), Postives = 97/237 (40.93%), Query Frame = 2 Query: 161 FRQKLWVESKKLWIVAAPAIFTRFSSFGLNVVSQAFIGHIGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAXXXXXXXXXXXXXXVALGQEENIAEVAGTISFMLIPVLFAFIISFTCQMYLQAQSRNMIISYLAACXXXXXXXXXXXXTMKLNFGLPGALGSTILAYWIPNLGQLLFVICGGCP-QTWKGFSFAAFKDLWPVVKLS 868 F ++W L+ ++ P + +F + +VS F GH+G +LA+ +L + + +G++SA +TL Q+FG+ +G+ LQR +VL +C + Q+ ++ + + IP L + YLQ Q LN G+ G+ + I++ + + LL+++ +TW G+S +D P L+ Sbjct: 27 FGTEMWT----LFALSGPLFLFQVLTFMIYIVSTVFCGHLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLLLCCLPCWALFLNTQHILLLFRQDPEVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQKITWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLA 259
BLAST of FC878167 vs. ExPASy Swiss-Prot
Match: S47A2_RABIT (Multidrug and toxin extrusion protein 2 OS=Oryctolagus cuniculus GN=SLC47A2 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.750e-11 Identity = 49/232 (21.12%), Postives = 96/232 (41.38%), Query Frame = 2 Query: 176 WVESKKLWIVAAPAIFTRFSSFGLNVVSQAFIGHIGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAXXXXXXXXXXXXXXVALGQEENIAEVAGTISFMLIPVLFAFIISFTCQMYLQAQSRNMIISYLAACXXXXXXXXXXXXTMKLNFGLPGALGSTILAYWIPNLGQLLFVICGGCP-QTWKGFSFAAFKDLWPVVKLS 868 W E++ L++++ P + +F VV F GH+G +LA+ +L + + G++SA +TL Q+FG+ +G+ LQR ++L +C + Q+ ++ + + + IP L A + YLQ Q LN G+ G+ + ++ ++ L ++ +TW+G+S +D P + L+ Sbjct: 57 WDEARALFVLSGPLFLFQVLNFLTYVVGTVFCGHLGKVELASVTLGVAFVNVCGVSVGAGLSSACDTLMSQSFGSPNKKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQDYAMIFIPGLPAIFLYSLLAKYLQNQGIVWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANTISQFVQAAFLFLHIVLKKLHLETWEGWSSQCLRDWGPFLSLA 288 The following BLAST results are available for this feature:
BLAST of FC878167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878167 ID=FC878167; Name=FC878167; organism=Citrus clementina; type=EST; length=925bpback to top |