FC878178
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878178 vs. ExPASy Swiss-Prot
Match: WDR53_MOUSE (WD repeat-containing protein 53 OS=Mus musculus GN=Wdr53 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.635e-13 Identity = 49/147 (33.33%), Postives = 78/147 (53.06%), Query Frame = 1 Query: 55 GHKATATCCIASRDRPGFVATSGEDGCVCWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKTLRAGHSSICSSVQFIPWKP 495 GH ++ C A++D G VA+ GE G + + + + G VTS+ F + +Y S G+ + DV L+ ++ N+EEIN + N S LA ADD G +KI+D+ + + ++L+ HS+ICSSV F P +P Sbjct: 8 GHSSSILCLNANKD--GLVASGGEGGDLVAWGEDGTPLGHMQLEGADDVTSVLFSASCPTKLYASHGETISVLDVRSLKG--SLDHFHVNEEEINCLSLNETESLLASADDSGAIKILDLEKKKVTRSLKR-HSNICSSVAFRPQRP 149
BLAST of FC878178 vs. ExPASy Swiss-Prot
Match: WDR53_DICDI (WD repeat-containing protein 53 homolog OS=Dictyostelium discoideum GN=wdr53 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.804e-12 Identity = 49/151 (32.45%), Postives = 81/151 (53.64%), Query Frame = 1 Query: 46 RLRGHKATATCCIASRDRPGFVATSGEDGCVCWFDLRS-KDVQLVTDVGNG-PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMP-ASWRPLES-YNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKTLRAGHSSICSSVQFIP 486 +L GHK T C I+S ++ +A+ +D V +DL + K +Q + + G PV ++CF + +Y S + SFD+ P + + Y +N EEINQ+ + K +LA DD G KIID+ ++ L ++L H++I + F P Sbjct: 24 KLIGHKDTVLC-ISSHNKKEIIASGSDDCTVRIWDLNTNKSIQSIVEGFQGNPVNNVCFDQ--DFTLYCSYDNIIVSFDLRQPNVILKEFNTQYKFNTEEINQLSFDSKYQYLAACDDSGQTKIIDVTKNKLVESLNKKHTNIATGCVFRP 171
BLAST of FC878178 vs. ExPASy Swiss-Prot
Match: WDR53_BOVIN (WD repeat-containing protein 53 OS=Bos taurus GN=WDR53 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.077e-12 Identity = 51/151 (33.77%), Postives = 78/151 (51.66%), Query Frame = 1 Query: 55 GHKATATCCIASRDRPGFVATSGEDG-CVCWFDLRSKDVQLVTDV---GNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKTLRAGHSSICSSVQFIPWKP 495 GH + C AS++ G VA+ E G V W +D L+ G VT++ F +Y S G+ + DV + PL+ ++ N+EEIN + N + LA ADD G +KI+D+ + ++L+ HS+ICSSV F P +P Sbjct: 8 GHSSPILCLNASQE--GLVASGAEGGDLVVW----GEDGTLLGHTCFQGAEDVTNVLFSPSCPTKLYASHGETISILDVR--SLKEPLDDFHVNEEEINCLSLNETENLLASADDSGTIKILDLENKKISRSLKR-HSNICSSVAFRPQRP 149
BLAST of FC878178 vs. ExPASy Swiss-Prot
Match: WDR53_HUMAN (WD repeat-containing protein 53 OS=Homo sapiens GN=WDR53 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.605e-11 Identity = 46/147 (31.29%), Postives = 73/147 (49.66%), Query Frame = 1 Query: 55 GHKATATCCIASRDRPGFVATSGEDGCVCWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKTLRAGHSSICSSVQFIPWKP 495 GH + C AS++ G +A+ E G + + + G VTS+ F +Y S G+ + DV L+ ++ N+EEIN + N + LA ADD G +KI+D+ + ++L+ HS+ICSSV F P +P Sbjct: 8 GHSSPVLCLNASKE--GLLASGAEGGDLTAWGEDGTPLGHTRFQGADDVTSVLFSPSCPTKLYASHGETISVLDVRSLKD--SLDHFHVNEEEINCLSLNQTENLLASADDSGAIKILDLENKKVIRSLKR-HSNICSSVAFRPQRP 149 The following BLAST results are available for this feature:
BLAST of FC878178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878178 ID=FC878178; Name=FC878178; organism=Citrus clementina; type=EST; length=907bpback to top |