FC878234

BLAST of FC878234 vs. ExPASy Swiss-Prot
Match: RPB3A_ARATH (DNA-directed RNA polymerase II subunit RPB3-A OS=Arabidopsis thaliana GN=RPB36A PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 1.526e-48
Identity = 91/100 (91.00%), Postives = 99/100 (99.00%), Query Frame = 1

Query:   43 MDGASYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEVEVNSSVLNDEFIAHRLGLIPLTSERAVSMRFSRECDACDGDGQCE 342
            MDGA+YQRFPK+KIRELKDDYAKFELR+TD SMANALRRVMI+EVPT+AIDLVE+EVNSSVLNDEFIAHRLGLIPLTSERA+SMRFSR+CDACDGDGQCE
Sbjct:    1 MDGATYQRFPKIKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE 100          

BLAST of FC878234 vs. ExPASy Swiss-Prot
Match: RPB3B_ARATH (DNA-directed RNA polymerase II subunit RPB3-B OS=Arabidopsis thaliana GN=RPB36B PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 4.450e-40
Identity = 79/100 (79.00%), Postives = 90/100 (90.00%), Query Frame = 1

Query:   43 MDGASYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEVEVNSSVLNDEFIAHRLGLIPLTSERAVSMRFSRECDACDGDGQCE 342
            MDG +YQRFP VKIRELKDDYAKFELR+TD SMANALRRVMI+EVPT+AI LV++EVNSSVLNDEFIA RL LIPLTSERA+SMRF ++C+ C+GD  CE
Sbjct:    1 MDGVTYQRFPTVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTMAIHLVKIEVNSSVLNDEFIAQRLSLIPLTSERAMSMRFCQDCEDCNGDEHCE 100          

BLAST of FC878234 vs. ExPASy Swiss-Prot
Match: RPB3_DICDI (DNA-directed RNA polymerase II subunit rpb3 OS=Dictyostelium discoideum GN=polr2c PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.185e-22
Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 1

Query:   64 RFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEVEVNSSVLNDEFIAHRLGLIPLTSERAVSMRFSRECDACDGDGQC 339
            R P+++I E+K+D   F L +TD S+ANALRRVMIAEVPT+ IDLVE E N+SVL DEFIAHRLGLIPL S+      ++R+C   D   QC
Sbjct:   10 RQPELEILEIKNDSIIFILSNTDISVANALRRVMIAEVPTMCIDLVEFESNNSVLCDEFIAHRLGLIPLVSDNIDKFCYTRDCSCSDRCDQC 101          

BLAST of FC878234 vs. ExPASy Swiss-Prot
Match: RPB3_YEAST (DNA-directed RNA polymerase II subunit RPB3 OS=Saccharomyces cerevisiae GN=RPB3 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 1.590e-21
Identity = 53/88 (60.23%), Postives = 64/88 (72.73%), Query Frame = 1

Query:   70 PKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEVEVNSSVLNDEFIAHRLGLIPLTSERAVSMRFSREC---DACD 324
            P+VKIRE   D   F L + D +MAN+LRRVMIAE+PT+AID VEVE N++VL DEFIAHRLGLIPL S     + +SR+C   D CD
Sbjct:    6 PQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCD 93          

BLAST of FC878234 vs. ExPASy Swiss-Prot
Match: RPB3_BOVIN (DNA-directed RNA polymerase II subunit RPB3 OS=Bos taurus GN=POLR2C PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.542e-21
Identity = 50/86 (58.14%), Postives = 67/86 (77.91%), Query Frame = 1

Query:   58 YQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEVEVNSSVLNDEFIAHRLGLIPLTSERAV-SMRFSREC 312
            Y   P V+I EL D+  KF + +TD ++AN++RRV IAEVP IAID V+++ NSSVL+DEFIAHRLGLIPLTS+  V  +++SR+C
Sbjct:    3 YANQPTVRITELTDENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLHDEFIAHRLGLIPLTSDDIVDKLQYSRDC 88          

BLAST of FC878234 vs. ExPASy Swiss-Prot
Match: RPB3_HUMAN (DNA-directed RNA polymerase II subunit RPB3 OS=Homo sapiens GN=POLR2C PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 1.758e-20
Identity = 49/86 (56.98%), Postives = 66/86 (76.74%), Query Frame = 1

Query:   58 YQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEVEVNSSVLNDEFIAHRLGLIPLTSERAV-SMRFSREC 312
            Y   P V+I EL D+  KF + +TD ++AN++RRV IAEVP IAID V+++ NSSVL+DEFIAHRLGLIPL S+  V  +++SR+C
Sbjct:    3 YANQPTVRITELTDENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLHDEFIAHRLGLIPLISDDIVDKLQYSRDC 88          

BLAST of FC878234 vs. ExPASy Swiss-Prot
Match: RPB3_MOUSE (DNA-directed RNA polymerase II subunit RPB3 OS=Mus musculus GN=Polr2c PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.296e-20
Identity = 49/86 (56.98%), Postives = 67/86 (77.91%), Query Frame = 1

Query:   58 YQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEVEVNSSVLNDEFIAHRLGLIPLTSERAV-SMRFSREC 312
            Y   P V+I EL ++  KF + +TD ++AN++RRV IAEVP IAID V+++ NSSVL+DEFIAHRLGLIPLTS+  V  +++SR+C
Sbjct:    3 YANQPTVRITELTEENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDGNSSVLHDEFIAHRLGLIPLTSDDIVDKLQYSRDC 88          

BLAST of FC878234 vs. ExPASy Swiss-Prot
Match: RPB3_SCHPO (DNA-directed RNA polymerase II subunit RPB3 OS=Schizosaccharomyces pombe GN=rpb3 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 3.103e-17
Identity = 43/88 (48.86%), Postives = 62/88 (70.45%), Query Frame = 1

Query:   76 VKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEVEVNSSVLNDEFIAHRLGLIPLTSER-----AVSMRFSRECDACD 324
            + IR +  +   F L +T  ++AN+LRRV++AE+PT+AIDLVE+ VN+SV+ DEF+AHRLG+IPL S        V + ++R CD CD
Sbjct:    7 ITIRNISKNSVDFVLTNTSLAVANSLRRVVLAEIPTVAIDLVEINVNTSVMPDEFLAHRLGMIPLDSSNIDEPPPVGLEYTRNCD-CD 93          

BLAST of FC878234 vs. ExPASy Swiss-Prot
Match: CNJC_TETTH (Conjugation stage-specific protein OS=Tetrahymena thermophila GN=CNJC PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.551e-13
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 1

Query:   73 KVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEVEVNSSVLNDEFIAHRLGLIPLTSERAVSMRFSRECDACDGD 330
            K+ +  L++   +F L + D S+AN+LRR+++AE+ TIAI  V+V  N+S L DE+IAHRLGLIPL S +     +   C+ C G+
Sbjct:    5 KLTLTNLEEFKCEFTLENCDISLANSLRRILLAEIETIAIHNVKVYENTSSLPDEYIAHRLGLIPLNSAKVDDYNYIWNCN-CQGE 89          

BLAST of FC878234 vs. ExPASy Swiss-Prot
Match: RPOD_METMA (DNA-directed RNA polymerase subunit D OS=Methanosarcina mazei GN=rpoD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.033e-12
Identity = 41/87 (47.13%), Postives = 54/87 (62.07%), Query Frame = 1

Query:   73 KVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEVEVNSSVLNDEFIAHRLGLIPLTSERAVSMRFSRECDACDGDG 333
            +V I EL D  AKF L     + AN +RR MIA+VPT+AI+ V +  N+SVL DE +A RL LIPL ++    M    EC+ C G+G
Sbjct:    4 EVDILELSDRSAKFVLSRVSMAFANGVRRAMIADVPTLAIEYVNLYDNTSVLYDEQLALRLSLIPLVTDIETYMP-QAECEVCGGEG 89