FC878248
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878248 vs. ExPASy Swiss-Prot
Match: TPP2_ARATH (Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thaliana GN=TPP2 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.413e-25 Identity = 75/197 (38.07%), Postives = 111/197 (56.35%), Query Frame = 2 Query: 224 MALRVTVNFSGYVAQNLAHSAGIRFGFSTTSTRSFHECLFRPRVFCHSKKTDL-DPPPN---YQPKANYRC-------NTLAAEIFGDGACNSPILMGLVSLMKSTAGMPGPSATSMGVFGISPFKAASIIPFLQGSKWLPCNEPGTV-PESDYVDKGGTT--DKIQFSGSENLNGVSLQLKTSGSWLSKLLNVCSD 772 MA+RVT +S YVA+++A SAG R G T RS E RPR H++ D+ D P + P + R +T+A EI +G C SP+++G++SLM T P + M GISPFK +S+IPFL+GSKW+PC+ P T+ + VD+GG K++ S+ ++ W++KLLN+CS+ Sbjct: 1 MAIRVTFTYSSYVARSIASSAGTRVG--TGDVRSCFETWVRPRFCGHNQIPDIVDKSPGSNTWGPSSGPRARPASSMYSTIAREILEEG-CKSPLVLGMISLMNLTGA---PQFSGMTGLGISPFKTSSVIPFLRGSKWMPCSIPATLSTDIAEVDRGGKVCDPKVKLELSDKVS------NGGNGWVNKLLNICSE 185
BLAST of FC878248 vs. ExPASy Swiss-Prot
Match: TPP1_ARATH (Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana GN=TPP1 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 2.274e-23 Identity = 76/183 (41.53%), Postives = 104/183 (56.83%), Query Frame = 2 Query: 224 MALRVTVNFSGYVAQNLAHSAGIRFGFSTTSTRSFHECLFRPRVFCHSKKTDLDPPPNYQPKANYRCNTLAAEIFGDGACNSPILMGLVSLMKSTAGMPGPSATSMGVFGISPFKAASIIPFLQGSKWLPCNEPGTVPESDYVDKGGTTDKIQFSGSENLNGVSLQLKTSGSWLSKLLNVCSD 772 MA+R+T +S +VA+NL G R G E L RPR F H K D D P +P + Y ++A E+ G+G+ SP++MGL+S++KST G +++M V G+S FKA+SIIPFLQGSKW+ P D VDKGGT E+ NG S W++KLL+VCS+ Sbjct: 1 MAIRITFTYSTHVARNLV---GTRVGPGGYC----FESLVRPRFFSH--KRDFDRSPRNRPASMY--GSIARELIGEGS-QSPLVMGLISILKSTTGH---ESSTMNVLGVSSFKASSIIPFLQGSKWIK-----NPPVIDDVDKGGTVCD-DDDDKESRNGGS-------GWVNKLLSVCSE 155 The following BLAST results are available for this feature:
BLAST of FC878248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878248 ID=FC878248; Name=FC878248; organism=Citrus clementina; type=EST; length=772bpback to top |