FC878283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878283 vs. ExPASy Swiss-Prot
Match: PLSP1_ARATH (Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1 PE=2 SV=2) HSP 1 Score: 238.81 bits (608), Expect = 2.946e-62 Identity = 130/216 (60.19%), Postives = 149/216 (68.98%), Query Frame = 3 Query: 234 NPNFVNFQHQN----PRPLN---PKNLLYR-LNCNKLKSSGEETKSVVNTXXXXXXXXXXXXXXXXXXXXXXXXXXALPGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVM 857 NPNF+ F ++ P+ LN NL R L+C +K S E TKS + P WL+ TSDDA+TV A+ +SLAFR F+AEPRYIPSLSMYPTFDVGDR+VAEKV+YYFRKPC+NDIVIFKSPPVLQEVGYTD DVFIKR+VAKEGD+VEV GKL+VNGV RNE +ILE P Y MTPI VPENSVFVM Sbjct: 30 NPNFIQFTPKSQLLFPQRLNFNTGTNLNRRTLSCYGIKDSSETTKSAPSLDSGDGGGGDGGDDDKGEVEEKNRL---FPEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILEPPGYEMTPIRVPENSVFVM 242
BLAST of FC878283 vs. ExPASy Swiss-Prot
Match: TPP1_ARATH (Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana GN=TPP1 PE=2 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 1.423e-40 Identity = 82/144 (56.94%), Postives = 108/144 (75.00%), Query Frame = 3 Query: 447 GWLN----ITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVL---QEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVM 857 GW+N + S+DAK A+ +S+ FRS +AEP+ IPS SMYPT D GDR++AEKV+Y+FRKP +DIVIFK+PP+L E GY+ +DVFIKR+VA EGD VEVR+GKL VN +V+ ED++LE SY M P+ VP+ VFV+ Sbjct: 144 GWVNKLLSVCSEDAKAAFTAVTVSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAPPILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFVLEPMSYEMEPMFVPKGYVFVL 287
BLAST of FC878283 vs. ExPASy Swiss-Prot
Match: TPP2_ARATH (Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thaliana GN=TPP2 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.858e-40 Identity = 84/141 (59.57%), Postives = 105/141 (74.47%), Query Frame = 3 Query: 447 GW----LNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVM 857 GW LNI S+DAK A+ +SL FRS +AEP+ IPS SM PT DVGDR++AEKV+Y+FRKP +DIVIFK+PP+L E GY+ DVFIKR+VA EGD VEV +GKL+VN V+ ED++LE Y M P+ VPE VFV+ Sbjct: 174 GWVNKLLNICSEDAKAAFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRVIAEKVSYFFRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFVLEPIDYEMEPMFVPEGYVFVL 314
BLAST of FC878283 vs. ExPASy Swiss-Prot
Match: LEP1_SYNY3 (Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803) GN=lepB1 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.131e-28 Identity = 64/139 (46.04%), Postives = 85/139 (61.15%), Query Frame = 3 Query: 441 LPGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVM 857 +P ++ ++ ALV++L R FVAEPRYIPS SM PT + GDR+V EKV+Y+F P DI++F P +LQ GY FIKRV+A G VEV G + +G E+YILE P YN+ + VP+ VFVM Sbjct: 6 IPSPWQFIKENIPLLMVALVLALLLRFFVAEPRYIPSDSMLPTLEQGDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQGYDLGQAFIKRVIALPGQTVEVNNGIVYRDGQPLQEEYILEPPQYNLPAVRVPDGQVFVM 144
BLAST of FC878283 vs. ExPASy Swiss-Prot
Match: LEP_PHOLA (Signal peptidase I OS=Phormidium laminosum GN=lepB PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.005e-23 Identity = 51/127 (40.16%), Postives = 80/127 (62.99%), Query Frame = 3 Query: 477 KTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVM 857 KT+ ++V++L R+FVAE RYIPS SM PT +V DR++ EK++Y+F P DI++F L++ + ++ FIKRV+ G+ V+V G++++NG E+YI P Y P VP +S V+ Sbjct: 33 KTIGLSVVLALGIRTFVAEARYIPSESMLPTLEVNDRLIVEKISYHFNPPRRGDIIVFHPTEALKQQNPSLNEAFIKRVIGLPGETVQVTGGRVLINGQPLEENYIQSPPDYQWGPEKVPADSFLVL 159
BLAST of FC878283 vs. ExPASy Swiss-Prot
Match: LEP2_SYNY3 (Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803) GN=lepB2 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.024e-22 Identity = 52/136 (38.24%), Postives = 82/136 (60.29%), Query Frame = 3 Query: 450 WLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVM 857 WL + KT++ A+++++ R+FVAE RYIPS SM PT + DR++ EK++Y R P +IV+F L+ + D FIKR++ GD V V +G + VNG + +E+YI P+Y P+ VP++ V+ Sbjct: 21 WLEL----GKTMVTAVILAIGIRTFVAEARYIPSSSMEPTLQINDRLIIEKISYRLRDPERGEIVVFNPTDALKAKNF--HDAFIKRIIGLPGDEVRVSQGNVYVNGKMLDENYIAAPPAYEYGPVKVPDDQYLVL 150
BLAST of FC878283 vs. ExPASy Swiss-Prot
Match: LEP_MYCLE (Probable signal peptidase I OS=Mycobacterium leprae GN=lepB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.886e-11 Identity = 53/167 (31.74%), Postives = 75/167 (44.91%), Query Frame = 3 Query: 483 VLAALVISLAF--RSFVAEPRYIPSLSMYPTFD-----VGDRIVAEKVTYYFRKPCSNDIVIFKSPP---------------------VLQEVGYT--DDDVFIKRVVAKEGDVVEVR-EGKLIVNGVVRNEDYILEAP-----------SYNMTPITVPENSVFVM 857 +LA + I L + +FVA P IPS SM PT VGDRI+ +K+TY F P D+++FK PP L VG+ D++ +KRV+A G V+ R + L VNG E Y+ P+TVP+ ++VM Sbjct: 58 ILAVIAIGLYYVMLTFVARPYLIPSESMEPTLHGCSGCVGDRIMVDKITYRFSSPQPGDVIVFKGPPSWNTMYKSIRSNNIVLRSVQNALSFVGFVPPDENDLVKRVIAVGGQTVQCRSDTGLTVNGKPLKEPYLRPVTMNADLSFSPCLGSEFGPVTVPQGRLWVM 224 The following BLAST results are available for this feature:
BLAST of FC878283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878283 ID=FC878283; Name=FC878283; organism=Citrus clementina; type=EST; length=858bpback to top |