FC878286

Overview
NameFC878286
Unique NameFC878286
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length601
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12035 contig Ccv1_Contig12035:397..997. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878286 vs. ExPASy Swiss-Prot
Match: COGT2_ARATH (Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.206e-32
Identity = 72/194 (37.11%), Postives = 114/194 (58.76%), Query Frame = 3
Query:   45 DAKSPVHCIISDGLMSFAIDVAKQVGIPIIYFRTVSACAFWAYFCIPEIIDAGELPIKGNEDM------DRLIKHVPGMEKFLRCRDLPSFCRAEDPMDMNLQLVVSETRSSVRADGLVLNTFEDLEGPVLSQIRAHCPKIYTIGPLNAHLKARIPENTH---SSNSLWEVDRSCIAWLDNQPFKSVIFVSFGS 599
            D   PV CI+SDG MSF +DVA+++G+P + F T S CAF AY      I+ G  P+K    +      D +I  +P M K ++ +D+PSF R  +P D+ +   + ET  + RA  ++LNTF+DLE  V+  +++  P +Y++GPL+      I E +     S++LW+ +  C+ WLD +   SVI+++FGS
Sbjct:  115 DNVPPVSCIVSDGCMSFTLDVAEELGVPEVLFWTTSGCAFLAYLHFYLFIEKGLCPLKDESYLTKEYLEDTVIDFIPTM-KNVKLKDIPSFIRTTNPDDVMISFALRETERAKRASAIILNTFDDLEHDVVHAMQSILPPVYSVGPLHLLANREIEEGSEIGMMSSNLWKEEMECLDWLDTKTQNSVIYINFGS 307          
BLAST of FC878286 vs. ExPASy Swiss-Prot
Match: HMNGT_SORBI (Cyanohydrin beta-glucosyltransferase OS=Sorghum bicolor GN=UGT85B1 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.086e-29
Identity = 67/195 (34.36%), Postives = 111/195 (56.92%), Query Frame = 3
Query:   57 PVHCIISDGLMSFAIDVAKQVGIPIIYFRTVSACAFWAYFCIPEIIDAGELPIKG------NEDMDRLIKHVPGMEKFLRCRDLPSFCRAEDPMDMNLQLVVSETRSSVRADGLVLNTFEDLEGPVLSQIRAHCPKIYTIGPLNAHLKARIPENTHSSN--------SLWEVDRSCIAWLDNQPFKSVIFVSFGS 599
            PV C++ D +M+FA   A++ GIP + F T SAC    Y    E+++ G +P +       ++ +D  ++ VPGM   +R RD+P+FCR  DP D+ +   + +  S+  +  L+LNT  +LE  V+  + A  P IYT+GPL     A +  ++ S++        S+W+ D  C++WLD +P  SV++V+FGS
Sbjct:  123 PVTCVVGDVVMTFAAAAAREAGIPEVQFFTASACGLLGYLHYGELVERGLVPFRDASLLADDDYLDTPLEWVPGMSH-MRLRDMPTFCRTTDPDDVMVSATLQQMESAAGSKALILNTLYELEKDVVDALAAFFPPIYTVGPL-----AEVIASSDSASAGLAAMDISIWQEDTRCLSWLDGKPAGSVVYVNFGS 311          
BLAST of FC878286 vs. ExPASy Swiss-Prot
Match: CNGT2_ARATH (Cytokinin-N-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT76C2 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.995e-13
Identity = 63/195 (32.31%), Postives = 97/195 (49.74%), Query Frame = 3
Query:   27 LKDMLTDAKSP--VHCIISDGLMSFAIDVAKQVGIPIIYFRTVSACAFWAYFCIPEIIDAGELPIKGNEDMDRLIKHVPGMEKFLRCRDLPS-FCRAEDPMDMNLQLVVSETRSSVRADGLVLNTFEDLEGPVLS-QIRAHCPKIYTIGPLNAHLKARIPENTHSSNSLWEVDRSCIAWLDNQPFKSVIFVSFGS 599
            L+ +L ++K    V C+I D    F   V++ + +P +   T  A  F AY  +P I   G LP+  +E  D + +  P     L+ RDL   F    + +D  L  VV  T   +R+ GL+  + E+LE   L+         ++ IGP +++  A       SS+SL+  D +CI WLD+Q  KSVI+VS GS
Sbjct:   93 LRKVLLESKESERVTCLIDDCGWLFTQSVSESLKLPRLVLCTFKATFFNAYPSLPLIRTKGYLPVSESEAEDSVPEFPP-----LQKRDLSKVFGEFGEKLDPFLHAVVETT---IRSSGLIYMSCEELEKDSLTLSNEIFKVPVFAIGPFHSYFSA-------SSSSLFTQDETCILWLDDQEDKSVIYVSLGS 272          
BLAST of FC878286 vs. ExPASy Swiss-Prot
Match: CNGT1_ARATH (Cytokinin-N-glucosyltransferase 1 OS=Arabidopsis thaliana GN=UGT76C1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.649e-12
Identity = 56/200 (28.00%), Postives = 96/200 (48.00%), Query Frame = 3
Query:    3 LASVTPPLLKDMLTDAKSPVHCIISDGLMSFAIDVAKQVGIPIIYFRTVSACAFWAYFCIPEIIDAGELPIKGNEDMDRLIKHVPGMEKFLRCRDLPSFCRAEDPMDMNLQLVVSETRSSVRADGLVLNTFEDLEGPVLSQI-RAHCPKIYTIGPLNAHLKARIPENTHSSNSLWEVDRSCIAWLDNQPFKSVIFVSFGS 599
            LA +  P       D K  + C+I D    F   VA+   +P           F  +F +P+I   G LP+  +E  D L+   P + K    R + +  +++ P+D  L  ++  T+    A G+++ + ++L+   L++  +     I+ IGP + H      +   SS+SL E D+SCI WLD +  +SV++VS GS
Sbjct:   93 LAKLIKPSSDSGTEDRK--ISCVIDDSGWVFTQSVAESFNLPRFVLCAYKFSFFLGHFLVPQIRREGFLPVPDSE-ADDLVPEFPPLRKKDLSRIMGTSAQSK-PLDAYLLKILDATKP---ASGIIVMSCKELDHDSLAESNKVFSIPIFPIGPFHIH------DVPASSSSLLEPDQSCIPWLDMRETRSVVYVSLGS 279          
BLAST of FC878286 vs. ExPASy Swiss-Prot
Match: UFOG6_MANES (Anthocyanidin 3-O-glucosyltransferase 6 (Fragment) OS=Manihot esculenta GN=GT6 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.804e-11
Identity = 52/179 (29.05%), Postives = 85/179 (47.49%), Query Frame = 3
Query:   72 ISDGLMSFAIDVAKQVGIPIIYFRTVSACAFWAYFCIPEIIDAGELPIKGNEDMDRLIKHVPGMEKFLRCRDLPSFCRAEDPMDMNLQLVVSETRSSVRADGLVLNTFEDLEGPVLSQIR---AHCPKIYTIGPLNAHLKARIPENTHSSNSLWEVDRSCIAWLDNQPFKSVIFVSFGS 599
            + D   +  IDVAK++G+P   F T  A      F +  I D  +  +   +D D  +  VP +   L  R LP+    +D     ++++    R    A G+++NTF +LE   L+ ++   +  P IY +GP+   LK      ++  N +       I WLD+QP  SV+F+ FGS
Sbjct:   35 VLDMFCTSMIDVAKELGVPYYIFFTSGAAFLGFLFYVQLIHDEQDADLTQFKDSDAELS-VPSLANSLPARVLPASMLVKDRFYAFIRII----RGLREAKGIMVNTFMELESHALNSLKDDQSKIPPIYPVGPI---LKL-----SNQENDVGPEGSEIIEWLDDQPPSSVVFLCFGS 200          
The following BLAST results are available for this feature:
BLAST of FC878286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
COGT2_ARATH2.206e-3237.11Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis t... [more]
HMNGT_SORBI5.086e-2934.36Cyanohydrin beta-glucosyltransferase OS=Sorghum bi... [more]
CNGT2_ARATH2.995e-1332.31Cytokinin-N-glucosyltransferase 2 OS=Arabidopsis t... [more]
CNGT1_ARATH5.649e-1228.00Cytokinin-N-glucosyltransferase 1 OS=Arabidopsis t... [more]
UFOG6_MANES2.804e-1129.05Anthocyanidin 3-O-glucosyltransferase 6 (Fragment)... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA24CD01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA24CD01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878286 ID=FC878286; Name=FC878286; organism=Citrus clementina; type=EST; length=601bp
CATTGGCATCAGTAACTCCCCCTCTTTTGAAAGATATGCTCACTGATGCT
AAGTCGCCGGTGCACTGTATAATCTCAGATGGACTTATGAGCTTTGCTAT
CGATGTTGCAAAACAAGTTGGAATTCCCATTATCTATTTTCGTACCGTCA
GCGCTTGTGCCTTTTGGGCTTATTTTTGCATCCCTGAAATCATCGACGCC
GGCGAGCTCCCTATCAAAGGAAATGAAGACATGGATCGCCTAATAAAACA
TGTGCCTGGCATGGAAAAGTTTCTCCGGTGCCGCGACCTTCCAAGCTTCT
GCCGAGCCGAGGACCCAATGGACATGAACCTCCAACTCGTTGTGAGCGAG
ACCCGATCATCTGTTCGAGCAGACGGACTCGTATTGAACACATTTGAAGA
CCTGGAAGGGCCCGTGCTGTCCCAAATCCGTGCTCACTGCCCTAAAATTT
ACACCATTGGACCTCTTAATGCGCATCTCAAAGCAAGAATCCCCGAAAAC
ACACATTCCTCAAACAGTTTATGGGAAGTGGATAGAAGTTGCATAGCTTG
GCTTGACAATCAACCTTTCAAATCTGTAATTTTCGTAAGCTTCGGCAGCG
T
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