FC878299

Overview
NameFC878299
Unique NameFC878299
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length867
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7104 contig Ccv1_Contig7104:5..871. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CARP_NANOT (Vacuolar protease A OS=Nannizzia otae (strain CBS 113480) GN=PEP2 PE=3 SV=1)

HSP 1 Score: 353.599 bits (906), Expect = 8.400e-97
Identity = 168/260 (64.62%), Postives = 204/260 (78.46%), Query Frame = 1
Query:   85 VHKMKLKKVPLSEQLEGANIGEHMQALGQKYMGVRPQKHADEMFKE-TSMHAEAGHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKESA 861
            +H +KLKKV L EQLE A+I   +++LGQKYMG+RP +H  +MFKE T + AE+GH V + NFLNAQYFSEI+IG PPQ FKVVLDTGSSNLW+P  DC SIAC+L               G+ FAIRYGSG++EG++SQD VQIGD+KIKNQLF EAT EPGLAFAFGRFDGILG+GYD+ISVNKI PPFY M++Q L+DEPVF+FYL DTN    +S   FGG +K HYTG++T +PLRRKAYWEV+ +AIT GK++A
Sbjct:   20 LHSLKLKKVSLKEQLEHADIDVQIKSLGQKYMGIRPGQHEQQMFKEQTPIEAESGHNVLIDNFLNAQYFSEISIGTPPQTFKVVLDTGSSNLWVPGKDCSSIACFLHSTYDSSASSTFTRNGTSFAIRYGSGSLEGFVSQDNVQIGDMKIKNQLFAEATSEPGLAFAFGRFDGILGMGYDTISVNKITPPFYKMVEQGLVDEPVFSFYLGDTNKDGDQSVVTFGGADKSHYTGDITTIPLRRKAYWEVEFNAITLGKDTA 279          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CARP_ASPFU (Vacuolar protease A OS=Aspergillus fumigatus GN=pep2 PE=2 SV=1)

HSP 1 Score: 353.599 bits (906), Expect = 8.400e-97
Identity = 171/260 (65.77%), Postives = 202/260 (77.69%), Query Frame = 1
Query:   85 VHKMKLKKVPLSEQLEGANIGEHMQALGQKYMGVRPQKHADEMFKETSMHAEAGHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKESAE 864
            VHK+KL KVPL EQL   NI  H++ALGQKYMG+RP  H  E+ +E S++  + H V V NFLNAQYFSEI++G PPQ+FKVVLDTGSSNLW+P SDC SIAC+L               G++FAI+YGSG + G++SQDT+QIGD+K+  Q F EAT EPGLAFAFGRFDGILGLGYD+ISVNKI PPFY+M+DQ LLDEPVFAFYL DTN +   SEA FGG++K+HYTGELTK+PLRRKAYWEVD DAI  G   AE
Sbjct:   20 VHKLKLNKVPLDEQLYTHNIDAHVRALGQKYMGIRPNVH-QELLEENSLNDMSRHDVLVDNFLNAQYFSEISLGTPPQKFKVVLDTGSSNLWVPGSDCSSIACFLHNKYDSSASSTYKANGTEFAIKYGSGELSGFVSQDTLQIGDLKVVKQDFAEATNEPGLAFAFGRFDGILGLGYDTISVNKIVPPFYNMLDQGLLDEPVFAFYLGDTNKEGDNSEASFGGVDKNHYTGELTKIPLRRKAYWEVDFDAIALGDNVAE 278          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CARP_NEUCR (Vacuolar protease A OS=Neurospora crassa GN=pep-4 PE=3 SV=2)

HSP 1 Score: 340.887 bits (873), Expect = 5.634e-93
Identity = 163/260 (62.69%), Postives = 193/260 (74.23%), Query Frame = 1
Query:   85 VHKMKLKKVPLSEQLEGANIGEHMQALGQKYMGVRPQKHADEMFKETSMHAEAGHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKESAE 864
            VH MKLKKVPL+EQLE   I   +Q LGQKY G+R + H   MFK T       HPV ++NF+NAQYFSEI IG PPQ FKVVLDTGSSNLW+PSS CGSIACYL               G+ F I YGSG++ G++SQD + IGDI I +QLF EAT EPGLAFAFGRFDGILGLGYD I+VN I PPFY M++Q L+DEPVF+FYL+   D++ ESE +FGG+NKD YTG++T +PLRRKAYWEVD DAI +GK+ AE
Sbjct:   19 VHTMKLKKVPLAEQLESVPIDVQVQHLGQKYTGLRTESHTQAMFKATDAQVSGNHPVPITNFMNAQYFSEITIGTPPQTFKVVLDTGSSNLWVPSSQCGSIACYLHNKYESSESSTYKKNGTSFKIEYGSGSLSGFVSQDRMTIGDITINDQLFAEATSEPGLAFAFGRFDGILGLGYDRIAVNGITPPFYKMVEQKLVDEPVFSFYLA---DQDGESEVVFGGVNKDRYTGKITTIPLRRKAYWEVDFDAIGYGKDFAE 275          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CARP_YEAST (Saccharopepsin OS=Saccharomyces cerevisiae GN=PEP4 PE=1 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.647e-76
Identity = 139/262 (53.05%), Postives = 186/262 (70.99%), Query Frame = 1
Query:   85 VHKMKLKKVPLSEQLEGANIGEHMQALGQKYMGVRPQKHADEMF-KETSMHAEAGHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTN-DKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKESAE 864
            VHK K+ K  LS++++     +H+  LGQKY+    + + + +F +E     E GH V ++N+LNAQY+++I +G PPQ FKV+LDTGSSNLW+PS++CGS+AC+L               G++FAI+YG+G++EGYISQDT+ IGD+ I  Q F EAT EPGL FAFG+FDGILGLGYD+ISV+K+ PPFY+ I QDLLDE  FAFYL DT+ D E   EA FGGI++  + G++T LP+RRKAYWEV  + I  G E AE
Sbjct:   24 VHKAKIYKHELSDEMKEVTFEQHLAHLGQKYLTQFEKANPEVVFSREHPFFTEGGHDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSYKANGTEFAIQYGTGSLEGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAE 285          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CARPV_CANAL (Vacuolar aspartic protease OS=Candida albicans GN=APR1 PE=3 SV=3)

HSP 1 Score: 246.899 bits (629), Expect = 1.107e-64
Identity = 130/274 (47.45%), Postives = 170/274 (62.04%), Query Frame = 1
Query:   88 HKMKLKKVPLSEQLEGANIGEHMQALGQKYMGVRPQKHADEM---FKETSMHAEAGHPVA-----------VSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGSIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESE-AIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKESAE 864
            H +KL K+   E L+ +N  E+  +L  KY+ +    H +      +    + EA  P             ++N+LNAQYF+EI IG P Q FKV+LDTGSSNLW+PS DC S+AC+L               GS+F+I+YGSG++EGYISQD + IGD+ I  Q F EAT EPGLAFAFG+FDGILGL YD+ISVN I PP Y+ I+Q LL++P F FYL  T+  E +   A FGG +   + G++T LP+RRKAYWEV  + I  G E AE
Sbjct:   25 HSIKLSKLSNEETLDASNFQEYTNSLANKYLNLFNTAHGNPSNFGLQHVLTNQEAEVPFVTPKKGGKYDAPLTNYLNAQYFTEIQIGTPGQPFKVILDTGSSNLWVPSQDCTSLACFLHAKYDHDASSTYKVNGSEFSIQYGSGSMEGYISQDVLTIGDLVIPGQDFAEATSEPGLAFAFGKFDGILGLAYDTISVNHIVPPIYNAINQGLLEKPQFGFYLGSTDKDENDGGLATFGGYDASLFQGKITWLPIRRKAYWEVSFEGIGLGDEYAE 298          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.559e-53
Identity = 100/211 (47.39%), Postives = 139/211 (65.88%), Query Frame = 1
Query:  238 EAGHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCG-SIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKESAEF 867
            E G  VA+ N++NAQYF EI +G PPQ+F V+ DTGSSNLW+PS+ C  SIACYL               G   AI+YG+G++ GY S+D+V +GD+ +K+Q F EAT+EPG+ F   +FDGILGLG+  ISV K  P +Y MI+Q L+ +PVF+F+L+   D+    E IFGG++  HY GE T +P+ +K YW+ D+  +  G +S  F
Sbjct:   69 EEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFDMGDVLVGGKSTGF 279          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 4.085e-51
Identity = 97/202 (48.02%), Postives = 129/202 (63.86%), Query Frame = 1
Query:  250 PVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCG--SIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFG 849
            P  +SN+L+AQY+  I IG PPQ FKVV DTGSSNLW+PS +C   +IAC +               G+ F I+YGSG++ GY+S DTV +G + +  Q F EA  EPGL F   +FDGILGLGY SISV+ + P FY+M +Q L+D PVF+FYL+         E IFGG + + YTG+ T L + RKAYW+  +D++  G
Sbjct:   57 PEPLSNYLDAQYYGAITIGTPPQSFKVVFDTGSSNLWVPSKECSFTNIACLMHNKYNAKKSSTFEKNGTAFHIQYGSGSLSGYLSTDTVGLGGVSVTKQTFAEAINEPGLVFVAAKFDGILGLGYSSISVDGVVPVFYNMFNQGLIDAPVFSFYLNRDPSAAEGGEIIFGGSDSNKYTGDFTYLSVDRKAYWQFKMDSVKVG 258          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 1.189e-50
Identity = 91/209 (43.54%), Postives = 138/209 (66.03%), Query Frame = 1
Query:  244 GHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCG-SIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKESAEF 867
            G  +A+ N+++AQYF EI IG PPQ+F V+ DTGSSNLW+PSS C  S+AC                 G   AI+YG+G++ G+ SQD+V++GD+ +K Q F EAT+EPG+ F   +FDGILGLG+  ISV    P +Y+M++Q L+ EPVF+F+L+   D++   E +FGG++ +H+ GE T +P+ +K YW+ ++  +  G ++  F
Sbjct:   38 GELIALKNYMDAQYFGEIGIGTPPQKFTVIFDTGSSNLWVPSSKCYFSVACLFHSKYRSTDSTTYKKNGKSAAIQYGTGSISGFFSQDSVKLGDLLVKEQDFIEATKEPGITFLAAKFDGILGLGFQEISVGDAVPVWYTMLNQGLVQEPVFSFWLNRNADEQEGGELVFGGVDPNHFKGEHTYVPVTQKGYWQFEMGDVLIGDKTTGF 246          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: CATD_DICDI (Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.189e-50
Identity = 101/211 (47.87%), Postives = 133/211 (63.03%), Query Frame = 1
Query:  241 AGHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCGS--IACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKESAEF 867
            AG  + +S+F +AQY+  I IG P Q FKVV DTGSSNLWIPS  C    +AC L               G+DF I+YGSGA+ G++SQD+V +G + +K+QLF EAT EPG+AF F +FDGILGL + SISVN IPP FY+M+ Q L+   +F+F+LS T       E  FG I+   YTG++T +PL  + YWE  +D      +SA F
Sbjct:   49 AGTTIPISDFEDAQYYGAITIGTPGQAFKVVFDTGSSNLWIPSKKCPITVVACDLHNKYNSGASSTYVANGTDFTIQYGSGAMSGFVSQDSVTVGSLTVKDQLFAEATAEPGIAFDFAKFDGILGLAFQSISVNSIPPVFYNMLSQGLVSSTLFSFWLSRTPGANG-GELSFGSIDNTKYTGDITYVPLTNETYWEFVMDDFAIDGQSAGF 258          
BLAST of FC878299 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 5.899e-50
Identity = 91/209 (43.54%), Postives = 135/209 (64.59%), Query Frame = 1
Query:  244 GHPVAVSNFLNAQYFSEIAIGNPPQEFKVVLDTGSSNLWIPSSDCG-SIACYLXXXXXXXXXXXXXXXGSDFAIRYGSGAVEGYISQDTVQIGDIKIKNQLFGEATQEPGLAFAFGRFDGILGLGYDSISVNKIPPPFYSMIDQDLLDEPVFAFYLSDTNDKEAESEAIFGGINKDHYTGELTKLPLRRKAYWEVDLDAITFGKESAEF 867
            G  VA+ N++NAQYF EI +G PPQ+F V+ DTGSSNLW+PS+ C  SIAC+                G   AI+YG+G++ G+ S+D+V +GD+ +K+Q F EAT+EPGL F   +FDGILGLG+  ISV    P +Y M++Q L+ EPVF+F+ +  +D+    E +FGG++  HY G  T +P+ +K YW+ ++  +  G ++  F
Sbjct:   72 GDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACFFHSRYKSGQSSTYQKNGKPAAIQYGTGSIAGFFSEDSVTVGDLVVKDQEFIEATKEPGLTFMVAKFDGILGLGFQEISVGDAVPVWYKMVEQGLVSEPVFSFWFNRHSDEGEGGEIVFGGMDPSHYKGNHTYVPVSQKGYWQFEMGDVLIGGKTTGF 280          
The following BLAST results are available for this feature:
BLAST of FC878299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
CARP_NANOT8.400e-9764.62Vacuolar protease A OS=Nannizzia otae (strain CBS ... [more]
CARP_ASPFU8.400e-9765.77Vacuolar protease A OS=Aspergillus fumigatus GN=pe... [more]
CARP_NEUCR5.634e-9362.69Vacuolar protease A OS=Neurospora crassa GN=pep-4 ... [more]
CARP_YEAST1.647e-7653.05Saccharopepsin OS=Saccharomyces cerevisiae GN=PEP4... [more]
CARPV_CANAL1.107e-6447.45Vacuolar aspartic protease OS=Candida albicans GN=... [more]
ASPR_HORVU2.559e-5347.39Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
ASPP_AEDAE4.085e-5148.02Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]
CYPR1_CYNCA1.189e-5043.54Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
CATD_DICDI1.189e-5047.87Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE... [more]
ASPR1_ORYSJ5.899e-5043.54Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AH03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AH03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878299 ID=FC878299; Name=FC878299; organism=Citrus clementina; type=EST; length=867bp
ACACATCCCCCACACAGAAACAACAAGATGAAGGGCAGTTCTCTCATGGC
AGCCGGTGCGCTGTTTGGCTCGGCTTCGGCTGGTGTCCACAAGATGAAGC
TCAAGAAGGTTCCTCTCTCGGAGCAGCTTGAGGGCGCAAACATTGGCGAG
CACATGCAGGCTCTCGGCCAGAAGTACATGGGTGTTCGCCCCCAGAAGCA
CGCCGACGAGATGTTCAAGGAGACCTCCATGCACGCTGAGGCCGGCCACC
CCGTCGCTGTCAGCAACTTTCTGAACGCTCAGTACTTCTCCGAGATTGCC
ATCGGCAACCCTCCCCAGGAGTTCAAGGTCGTCCTCGACACTGGTAGCTC
CAACCTGTGGATCCCCTCGTCTGACTGTGGTTCCATCGCTTGCTATCTCC
ACAACAAGTACGACCACAGCGACTCTTCGTCGTACAAGAAGAACGGCTCC
GACTTTGCCATCCGCTACGGCTCGGGTGCTGTTGAGGGTTACATCTCTCA
GGACACTGTCCAGATTGGTGACATCAAGATCAAGAACCAGCTCTTCGGTG
AGGCCACTCAGGAGCCTGGCTTGGCTTTCGCCTTTGGCCGCTTCGACGGT
ATCCTCGGTCTTGGATACGACTCCATCAGTGTCAACAAGATCCCCCCTCC
TTTCTACTCAATGATTGACCAGGACCTGCTCGACGAGCCTGTCTTCGCCT
TCTACCTCAGCGACACCAACGACAAGGAGGCTGAGTCCGAGGCCATCTTC
GGTGGTATCAACAAGGACCACTACACCGGCGAGCTCACCAAGCTCCCTCT
GAGACGCAAGGCCTACTGGGAGGTTGACCTTGACGCCATCACCTTCGGCA
AGGAGAGTGCCGAGTTC
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