FC878302
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878302 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2) HSP 1 Score: 182.185 bits (461), Expect = 2.616e-45 Identity = 103/229 (44.98%), Postives = 133/229 (58.08%), Query Frame = 1 Query: 55 PTNQMEKDASVKPKEDHRSEMRRMGAIPHAQNEQERNKQRMSTIPRRDDHEIDMSSLDMMMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGTAVKTSTKTAKPFTTARSFTIASLQQYTNSFSQEYLIGAGMLGSVYRAQLPDGKLLTVKKLDKRASSQHKDDEFLELVNNIDRIRHANIVGLKGYCA*HGQWLLI*EYCSNGTLHDMLHSDDELKNNLSWN 741 P+N KD +PKE R+G ER+ + + +++ HEIDM+ M +M AE + +T++K+ P T + FT+ASLQQ+TNSFS E LIG GMLGSVYRA+LP GKL V+KLDK++ + ++ +FLELVNNIDRIRHANIV L G+C+ H Q LLI EYC NGTLHD+LH DD LK LSWN Sbjct: 375 PSNTFNKDKEARPKE-------RVGGASKLHGGAERS---VGSESKQESHEIDMNGNAMDLMHPSSIPPIKRVIAKATEP---------------AEASLKRTTSKSHGPLTAVKHFTVASLQQHTNSFSHENLIGTGMLGSVYRAELPGGKLFAVRKLDKKSPNHEEEGKFLELVNNIDRIRHANIVQLVGFCSEHSQRLLIHEYCRNGTLHDLLHIDDRLKIELSWN 578
BLAST of FC878302 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.298e-44 Identity = 89/130 (68.46%), Postives = 103/130 (79.23%), Query Frame = 1 Query: 355 VKTSTKTAKPFTTARSFTIASLQQYTNSFSQEYLIGAGMLGSVYRAQLPDGKLLTVKKLDKRASSQHKDDEFLELVNNIDRIRHANIVGLKGYCA*HGQWLLI*EYCSNGTLHDMLHSDDELKNNLSWNT 744 VK ++ P T+ + ++IASLQQYT SF+QE LIG+GMLGSVYRA+LP+GKL VKKLDKRAS Q +D EF+ELVNNID IRH+NIV L GYCA H Q LL+ EYCSNGTL D LHSDDE K LSWNT Sbjct: 457 VKKTSPKRLPLTSVKHYSIASLQQYTESFAQENLIGSGMLGSVYRARLPNGKLFAVKKLDKRASEQQQDHEFIELVNNIDMIRHSNIVELVGYCAEHDQRLLVYEYCSNGTLQDGLHSDDEFKKKLSWNT 586
BLAST of FC878302 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.261e-31 Identity = 64/117 (54.70%), Postives = 84/117 (71.79%), Query Frame = 1 Query: 391 TARSFTIASLQQYTNSFSQEYLIGAGMLGSVYRAQLPDGKLLTVKKLDKRASSQHKDDEFLELVNNIDRIRHANIVGLKGYCA*HGQWLLI*EYCSNGTLHDMLHSDDELKNNLSWN 741 TA +T++SLQ TNSFSQE +IG G LG VYRA+ P+GK++ +KK+D A S ++D FLE V+N+ R+RH NIV L GYC HGQ LL+ EY NG L D LH++D+ NL+WN Sbjct: 379 TASQYTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWN 495
BLAST of FC878302 vs. ExPASy Swiss-Prot
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.456e-28 Identity = 61/118 (51.69%), Postives = 81/118 (68.64%), Query Frame = 1 Query: 388 TTARSFTIASLQQYTNSFSQEYLIGAGMLGSVYRAQLPDGKLLTVKKLDKRASSQHKDDEFLELVNNIDRIRHANIVGLKGYCA*HGQWLLI*EYCSNGTLHDMLHSDDELKNNLSWN 741 ++A FTIASLQQYTN+FS+E +IG G +G+VYRA+L GK L VKKL + D EFL LV+N+ +++ +I+ L GYC GQ LL+ EYC NG+L D LH D +L L+WN Sbjct: 480 SSATVFTIASLQQYTNNFSEENIIGEGSIGNVYRAELRHGKFLAVKKLSNTINRTQSDGEFLNLVSNVLKLKRGHILELLGYCNEFGQRLLVYEYCPNGSLQDALHLDRKLHKKLTWN 597
BLAST of FC878302 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.546e-24 Identity = 58/131 (44.27%), Postives = 79/131 (60.31%), Query Frame = 1 Query: 352 AVKTSTKTAKPFTTARSFTIASLQQYTNSFSQEYLIGAGMLGSVYRAQLPDGKLLTVKKLDKRASSQHKDDEFLELVNNIDRIRHANIVGLKGYCA*HGQWLLI*EYCSNGTLHDMLHSDDELKNNLSWNT 744 AVK ST + R +++A LQ T SFS + L+G G G VYRA+ DGK+L VKK+D A D+F+E+V+ I + H N+ L GYCA HGQ L++ E+ NG+LHD LH +E L WN+ Sbjct: 389 AVKKSTVVVP--SNVRLYSVADLQIATGSFSVDNLLGEGTFGRVYRAEFDDGKVLAVKKIDSSALPHGMTDDFIEMVSKIANLDHPNVTKLVGYCAEHGQHLVVYEFHKNGSLHDFLHLSEEESKALVWNS 517
BLAST of FC878302 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.264e-23 Identity = 53/118 (44.92%), Postives = 73/118 (61.86%), Query Frame = 1 Query: 388 TTARSFTIASLQQYTNSFSQEYLIGAGMLGSVYRAQLPDGKLLTVKKLDKRASSQHKDDEFLELVNNIDRIRHANIVGLKGYCA*HGQWLLI*EYCSNGTLHDMLHSDDELKNNLSWN 741 + ++T++ LQ TNSFS + L+G G G VYRAQ DGK+L VKK+D A D+F E+V+ I + H N+ L GYC+ HGQ L++ E+ NG+LHD LH +E L WN Sbjct: 402 SNVNTYTVSDLQVATNSFSVDNLLGEGTFGRVYRAQFEDGKVLAVKKIDSSALPTDTADDFTEIVSKIAHLDHENVTKLDGYCSEHGQHLVVYEFHRNGSLHDFLHLAEEESKPLIWN 519
BLAST of FC878302 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.708e-20 Identity = 51/127 (40.16%), Postives = 82/127 (64.57%), Query Frame = 1 Query: 358 KTSTKTAKPFTTARSFTIASLQQYTNSFSQEYLIGAGMLGSVYRAQLPDGKLLTVKKLDKRASSQHKDDEFLELVNNIDRIRHANIVGLKGYCA*HGQWLLI*EYCSNGTLHDMLHSDDELKNNLSW 738 K+ + T + + A+ F+ A LQ TN FS+E L+G G LGSVYRA+LPDG+ V+ + + S H++++F E++ ++RH NIV L G+C +G+ LL+ EY + +L++ +H DE+ LSW Sbjct: 388 KSFSATCQYPSFAKLFSAAELQLATNCFSEENLLGEGPLGSVYRAKLPDGQFAVVRNIPMSSLSLHEEEQFTEVLQTASKLRHPNIVTLLGFCIENGEHLLVYEYVGHLSLYNAMH--DEVYKPLSW 512
BLAST of FC878302 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.969e-20 Identity = 51/131 (38.93%), Postives = 72/131 (54.96%), Query Frame = 1 Query: 352 AVKTSTKTAKPFTTARSFTIASLQQYTNSFSQEYLIGAGMLGSVYRAQLPDGKLLTVKKLDKRASSQHKDDEFLELVNNIDRIRHANIVGLKGYCA*HGQWLLI*EYCSNGTLHDMLHSDDELKNNLSWNT 744 A K + K +A F ++ LQ T +FS L+G G +G VYRA+ DG+ L VKK+D K + +V ++ +IRH NI L GYC+ G +L+ EY NG+LH+ LH D L+WNT Sbjct: 375 ANKLNAKRTTSTRSAVEFELSDLQSATANFSPGNLLGEGSIGRVYRAKYSDGRTLAVKKIDSTLFDSGKSEGITPIVMSLSKIRHQNIAELVGYCSEQGHNMLVYEYFRNGSLHEFLHLSDCFSKPLTWNT 505
BLAST of FC878302 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.446e-19 Identity = 48/133 (36.09%), Postives = 77/133 (57.89%), Query Frame = 1 Query: 349 TAVKTSTKTAKPFTTA-RSFTIASLQQYTNSFSQEYLIGAGMLGSVYRAQLPDGKLLTVKKLDKRASSQHKDDEFLELVNNIDRIRHANIVGLKGYCA*HGQWLLI*EYCSNGTLHDMLHSDDELKNNLSWNT 744 T ++ST P T ++F++A LQ + FS L+G G +G VY+A+ DG+ VK++D + +EF +V++I I H N+ L GYC+ G+ +L+ EY ++G+LH LH D+ L+WNT Sbjct: 384 TPDRSSTSQDSPDTRGVKAFSLADLQNTASCFSPNRLLGEGTIGRVYKAKFQDGRKFAVKEIDSSLLGKGNPEEFSHIVSSISSIHHKNMAELVGYCSEQGRNMLVYEYFTSGSLHRFLHLSDDFSKPLTWNT 516
BLAST of FC878302 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.821e-15 Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = 1 Query: 397 RSFTIASLQQYTNSFSQEYLIGAGMLGSVYRAQLPDGKLLTVKKLDKRASSQHKDDEFLELVNNIDRIRHANIVGLKGYCA*HGQWLLI*EYCSNGTLHDMLHSDDELKNNLSW 738 R T A L + TN F + L+G+G G VY+AQL DG ++ +KKL S D EF + I +I+H N+V L GYC + LL+ EY G+L D+LH ++ L+W Sbjct: 874 RKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIH--VSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIGIKLNW 985 The following BLAST results are available for this feature:
BLAST of FC878302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878302 ID=FC878302; Name=FC878302; organism=Citrus clementina; type=EST; length=745bpback to top |