FC878304

Overview
NameFC878304
Unique NameFC878304
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length893
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10569 contig Ccv1_Contig10569:4..896. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878304 vs. ExPASy Swiss-Prot
Match: ANGT_GENTR (Anthocyanin 3'-O-beta-glucosyltransferase OS=Gentiana triflora PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.286e-22
Identity = 73/288 (25.35%), Postives = 133/288 (46.18%), Query Frame = 2
Query:   53 HILVYPFPTSGHIIPXXXXXXXXXXXXXXXXXXXXQNNLPL-LDSLNANHP---STSLQSLVLPQPKW--PAGSPATRVLKFMRVLRELHYPALL------DWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFATWTDLPTNDEPDNVDALLSFPRVPNCPVYPWYQISHLYRTRKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGS 880
            H+  +PF  +GHI+P                     NN  + L ++N +       S+ ++  P  ++  P G       + + ++ E     +L      +  K H   P A+++D F  W    AA+ G+PR++F  S +FA+  + +   + P  +   + D  +  P +P+  +    Q+     T +      ++ ++   +    +G++ NSF ELE  Y+D+ K  +G  R W +GP+   +++  +   RG  S + AH+ L WLDS+  +SVVYVCFGS
Sbjct:    5 HVFFFPFLANGHILPTIDMAKLFSSRGVKATLITTHNNSAIFLKAINRSKILGFDISVLTIKFPSAEFGLPEGYETADQARSIDMMDEFFRACILLQEPLEELLKEHR--PQALVADLFFYWANDAAAKFGIPRLLFHGSSSFAMIAAESVRRNKPYKNLSSDSDPFV-VPDIPDKIILTKSQVPTPDETEENNTHITEMWKNISESENDCYGVIVNSFYELEPDYVDYCKNVLGR-RAWHIGPLSLCNNEGEDVAERGKKSDIDAHECLNWLDSKNPDSVVYVCFGS 288          
BLAST of FC878304 vs. ExPASy Swiss-Prot
Match: COGT3_ARATH (Cytokinin-O-glucosyltransferase 3 OS=Arabidopsis thaliana GN=UGT73C5 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.004e-16
Identity = 76/293 (25.94%), Postives = 122/293 (41.64%), Query Frame = 2
Query:   53 HILVYPFPTSGHIIPXXXXXXXXXXXXXXXXXXXXQNNLPLLDSLNANHPSTSLQSLVLPQPKWP---AG-----------SPATRVLKFMRVLRELHYPA--LLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFATWTDLPTNDEPDNVDALLSFPRVPNCPVYPWYQISHLYRTRKEGDPDW-DLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGS 880
            H +++PF   GH+IP                     +N     ++  N    S   + L Q K+P   AG               R++ F + +  L  P   L++     PS    ++SDF L +T  +A +  +P+++F   G F L        +    D   +   L + P  P+   +   Q+     T      DW D+    + AN+TS+G++ NSF ELE  Y    K E+   + W +GPV   +    +   RG  S +   + L WLDS++  SV+YVC GS
Sbjct:   12 HFVLFPFMAQGHMIPMVDIARLLAQRGVIITIVTTPHNAARFKNV-LNRAIESGLPINLVQVKFPYLEAGLQEGQENIDSLDTMERMIPFFKAVNFLEEPVQKLIEEMNPRPS---CLISDFCLPYTSKIAKKFNIPKILFHGMGCFCLLCMHVLRKNREILDNLKSDKELFTVPDFPDRVEFTRTQVP--VETYVPAG-DWKDIFDGMVEANETSYGVIVNSFQELEPAYAKDYK-EVRSGKAWTIGPVSLCNKVGADKAERGNKSDIDQDECLKWLDSKKHGSVLYVCLGS 296          
BLAST of FC878304 vs. ExPASy Swiss-Prot
Match: COGT1_ARATH (Cytokinin-O-glucosyltransferase 1 OS=Arabidopsis thaliana GN=UGT73C1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.178e-14
Identity = 73/294 (24.83%), Postives = 126/294 (42.86%), Query Frame = 2
Query:   53 HILVYPFPTSGHIIPXXXXXXXXXXXXXXXXXXXXQNNLPLLDSLNANHPSTSLQSLVLPQPKWPA---GSPATRV-----------LKFMRVLRELHYPA--LLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFATWTDLPTNDEPDNVDALLSFPRVPNCPVYPWYQISHLYRTRKEGDPDWDLHRSNMM-ANKTSWGIVFNSFAELERVYI-DHMKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGS 880
            H +++PF   GH+IP                      N     ++ +    + L  + L Q K+P+   GSP  +            L F +    L  P   LL   +  P+    I++D  L +T  +A  LG+P+++F     F L     T      ++  + +++   +  +PN P    +  S L      GD  W      M   + TS+G++ N+F ELE  Y+ D+ K + G  ++W++GPV   +    +   RG  + +   + + WLDS+ + SV+YVC GS
Sbjct:   10 HFVLFPFMAQGHMIPMVDIARLLAQRGVTITIVTTPQNAGRFKNVLSRAIQSGLP-INLVQVKFPSQESGSPEGQENLDLLDSLGASLTFFKAFSLLEEPVEKLLKEIQPRPN---CIIADMCLPYTNRIAKNLGIPKIIFHGMCCFNL---LCTHIMHQNHEFLETIESDKEYFPIPNFPDRVEFTKSQLPMVLVAGD--WKDFLDGMTEGDNTSYGVIVNTFEELEPAYVRDYKKVKAG--KIWSIGPVSLCNKLGEDQAERGNKADIDQDECIKWLDSKEEGSVLYVCLGS 292          
The following BLAST results are available for this feature:
BLAST of FC878304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ANGT_GENTR9.286e-2225.35Anthocyanin 3'-O-beta-glucosyltransferase OS=Genti... [more]
COGT3_ARATH2.004e-1625.94Cytokinin-O-glucosyltransferase 3 OS=Arabidopsis t... [more]
COGT1_ARATH4.178e-1424.83Cytokinin-O-glucosyltransferase 1 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA12AH04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AH04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878304 ID=FC878304; Name=FC878304; organism=Citrus clementina; type=EST; length=893bp
TGATTTTCAAATTTCTTAAATTGGAAAGTCCAAAATGCTGCCGGCCGGCG
CTCATATTCTGGTCTATCCGTTCCCAACTTCCGGCCACATAATCCCACTC
CTCGACCTCACAAACCGGTTACTCACCCTTGGCTTAAACGTCACCGTTTT
AATCACCCAAAACAACCTCCCATTACTCGACTCATTAAATGCAAATCATC
CATCGACTTCCCTCCAATCCCTCGTCCTCCCCCAACCGAAATGGCCAGCA
GGTTCCCCAGCAACCAGGGTTCTTAAGTTCATGCGTGTGTTGCGTGAACT
TCACTACCCTGCACTGCTCGACTGGTTCAAATCCCACCCATCACCTCCCG
TTGCGATTCTGTCAGATTTCTTTCTCGGCTGGACCCAAGGGTTGGCCGCT
GAGCTCGGCTTGCCACGTGTCGTGTTCTCTCCGTCCGGCGCTTTTGCTTT
GTCGGTTTCCTTCGCTACGTGGACCGACTTGCCCACGAACGATGAACCCG
ACAACGTCGATGCTCTATTGTCGTTTCCGAGAGTTCCGAATTGTCCGGTT
TACCCCTGGTATCAGATCTCTCATCTTTATAGAACGCGTAAAGAAGGAGA
CCCAGATTGGGATCTGCATCGGAGCAATATGATGGCCAACAAGACGAGTT
GGGGAATCGTGTTTAACTCGTTCGCTGAGTTGGAACGCGTTTACATCGAT
CACATGAAGAAAGAAATGGGCCACGACCGGGTTTGGGCCGTTGGACCTGT
TTTGCCGCCCGACGATGACTTGGTGGAGTCCATGTGTCGCGGTGGGTCGA
GCTCGGTGCCAGCACACGATGTGCTGACGTGGCTTGACTCGCGTCGGGAC
GAATCAGTTGTCTACGTGTGTTTCGGTAGTCGTTATGTACTGA
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