FC878357

Overview
NameFC878357
Unique NameFC878357
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length657
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12116 contig Ccv1_Contig12116:203..859. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878357 vs. ExPASy Swiss-Prot
Match: FGGY_HUMAN (FGGY carbohydrate kinase domain-containing protein OS=Homo sapiens GN=FGGY PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 7.650e-40
Identity = 84/169 (49.70%), Postives = 110/169 (65.09%), Query Frame = 1
Query:  154 FLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCSLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLRE-SWSMVFRWMDLSDWLSYR 654
            ++GVDVGTGS RA L D+SG LL  A  PI+ W+ + +  EQSS DIW A C        +  +D  +++G+GF ATCSLV +D    P+ V+  GDS RN+I+W+DHRAV Q  +IN     VLQY GG +S EMQ PKLLW+KENLRE  W     + DL D+LS++
Sbjct:   12 YVGVDVGTGSVRAALVDQSGVLLAFADQPIKNWEPQFNHHEQSSEDIWAACCVVTKKV--VQGIDLNQIRGLGFDATCSLVVLDKQFHPLPVNQEGDSHRNVIMWLDHRAVSQVNRINETKHSVLQYVGGVMSVEMQAPKLLWLKENLREICWDKAGHFFDLPDFLSWK 178          
BLAST of FC878357 vs. ExPASy Swiss-Prot
Match: FGGY_MOUSE (FGGY carbohydrate kinase domain-containing protein OS=Mus musculus GN=Fggy PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.907e-39
Identity = 82/169 (48.52%), Postives = 109/169 (64.50%), Query Frame = 1
Query:  154 FLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCSLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLRE-SWSMVFRWMDLSDWLSYR 654
            ++G+DVGTGS RA L D+ G LL  A  PI+ W+ + +  EQSS DIW A C        +  +D   ++G+GF ATCSLV +D +  P+ V+  GDS RN+I+W+DHRAV Q  +IN     VLQY GG +S EMQ PKLLW+KENLRE  W     + DL D+LS++
Sbjct:   13 YVGIDVGTGSVRAALVDQRGLLLAFAEQPIKKWEPQFNHHEQSSEDIWAACCLVTKEV--VQGIDAHRIRGLGFDATCSLVVLDKEFHPLPVNHEGDSSRNVIMWLDHRAVSQVHRINETKHRVLQYVGGVMSVEMQAPKLLWLKENLREICWDKAGHFFDLPDFLSWK 179          
BLAST of FC878357 vs. ExPASy Swiss-Prot
Match: FGGY_XENLA (FGGY carbohydrate kinase domain-containing protein OS=Xenopus laevis GN=fggy PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 3.929e-36
Identity = 77/169 (45.56%), Postives = 108/169 (63.91%), Query Frame = 1
Query:  154 FLGVDVGTGSARAGLFDESGKLLGSASSPIQIWK-EGDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCSLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLRES-WSMVFRWMDLSDWLSYR 654
            ++G+DVGT S R  L D+ G ++      I+IW+ + D  EQSS DIW A C        +   D   ++G+GF ATCSLV +D    P++V+  G+ +RNII+WMDHRA  Q ++IN  N  VL+Y GG +S EMQPPKLLW+KENLRE  W+   +  DL D+L+++
Sbjct:   11 YVGIDVGTASVRVALVDQFGTVVDQVEQSIKIWEPQPDHYEQSSDDIWAACCQVTKQV--VRTKDPRCIRGLGFDATCSLVVLDTQFQPLAVNSQGEHKRNIIMWMDHRAGCQVDRINRTNHKVLRYVGGVMSVEMQPPKLLWLKENLREECWNKSGQLFDLPDFLTWK 177          
BLAST of FC878357 vs. ExPASy Swiss-Prot
Match: FGGY_DANRE (FGGY carbohydrate kinase domain-containing protein OS=Danio rerio GN=fggy PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 4.066e-33
Identity = 75/169 (44.38%), Postives = 104/169 (61.54%), Query Frame = 1
Query:  154 FLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEG-DCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCSLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLRES-WSMVFRWMDLSDWLSYR 654
            ++GVDVG+ S RA L    G+L  +A  PI + +   D  EQSST+IW   C  V        VD   V+G+GF  TCSLV +D    P++V+  G   RN+++WMDHRA  QA +I +    +LQ  GG +SPE+QPPKLLW+KENL +S W+    + DL D+LS++
Sbjct:    6 YVGVDVGSASVRAALVSPDGQLRRTAEEPIAVHEPCVDHYEQSSTEIWSKCCQTVKRVTE--GVDAACVRGIGFDGTCSLVVLDQQFRPLAVNLAGVCDRNVVMWMDHRAAAQASRITACRHTLLQRVGGVMSPEIQPPKLLWLKENLPDSCWTRAAHFFDLPDFLSWK 172          
BLAST of FC878357 vs. ExPASy Swiss-Prot
Match: YDR09_YEAST (Uncharacterized sugar kinase YDR109C OS=Saccharomyces cerevisiae GN=YDR109C PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.495e-32
Identity = 75/179 (41.90%), Postives = 112/179 (62.57%), Query Frame = 1
Query:  127 APPARSRSVFLGVDVGTGSARAGLFDESGKLLGSASSPIQIWKE-GDCIEQSSTDIWHAICAAVDSACSLANVDGEEVKGVGFAATCSLVAVDADG-SPVSVSWN-GDSRRNIIVWMDHRAVKQAEKINSRNSPVLQYCGGAVSPEMQPPKLLWVKENLRESWSMVFRWMDLSDWLSYR 654
            +P       ++GVDVGTGSARA + D+SG +L  A  PI+  +   + I QSS +IW+A+C  V +    + VD E V+G+GF ATCSLV V A     ++V  +  ++ +NII+WMDHRA+K+ E+INS     L+Y GG +S EM+ PK+ W+K NL        ++ DL D+L+++
Sbjct:   31 SPQDPEAKFYVGVDVGTGSARACVIDQSGNMLSLAEKPIKREQLISNFITQSSREIWNAVCYCVRTVVEESGVDPERVRGIGFDATCSLVVVSATNFEEIAVGPDFTNNDQNIILWMDHRAMKETEEINSSGDKCLKYVGGQMSVEMEIPKIKWLKNNLEAGIFQDCKFFDLPDYLTFK 209          
BLAST of FC878357 vs. ExPASy Swiss-Prot
Match: MPA43_YEAST (Protein MPA43 OS=Saccharomyces cerevisiae GN=MPA43 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.167e-12
Identity = 52/176 (29.55%), Postives = 83/176 (47.16%), Query Frame = 1
Query:  142 SRSVFLGVDVGTGSARAGLFDE-SGKLLGSASSPIQIWKEGDCIEQSSTDIWHA---ICAAVDSACSLANVDGEEVKGVGFAATCSLVAVDADG-SPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSR-NSPVLQYCGGAVSPEMQPPKLLWVKENLRESWSMVFRWMDLSDWLSY 651
            S  V +G+DVG+ SAR G+++  +  LL  A  P+  +++     + S   W     I  A+       N+   EVK  G +ATCSL   + D  S + + +  +   N+I WMD  AV + + +N +    +L Y GG   PEM  PKL +  +         F   DL  +++Y
Sbjct:    4 SLQVGIGIDVGSSSARIGVYNYYNDALLEMAQEPVPYYQDSS---KKSWKFWQKSTEIIKALQKCLQKLNIREYEVKSCGVSATCSLAIFERDRTSNMLIPYPNED--NVIFWMDSSAVNECQWLNMQCPQQLLDYLGGKFVPEMGVPKLKYFLDEYSHLRDKHFHIFDLHQYIAY 174          
BLAST of FC878357 vs. ExPASy Swiss-Prot
Match: XYLB_LACLA (Xylulose kinase OS=Lactococcus lactis subsp. lactis GN=xylB PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11
Identity = 50/167 (29.94%), Postives = 79/167 (47.31%), Query Frame = 1
Query:  157 LGVDVGTGSARAGLFDESGKLLGSASSPIQIWKEGDCIEQSSTDIWHAICAAVDSACSLANVD-GEEVKGVGFAATC-SLVAVDADGSPVSVSWNGDSRRNIIVWMDHRAVKQAEKINSR-NSPVLQYCGGAVSPEMQPPKLLWVKENLRESWSMVFRWMDLSDWLS 648
            LG+D+GT S +  L DE G L+ + S+  QI        +   + W     +V +  S+   D G+++ G+ F+    SLV +D +  PV  +         I+W D R  KQ ++I  R    +L+            PK+LW++EN  E WS V + M   D+LS
Sbjct:    5 LGIDLGTSSLKGILMDEVGNLITTKSAEYQIDTPKQGYSEQRPEYWIVALESVLTGLSVEISDFGQQLAGISFSGQMHSLVVLDDNNKPVYPA---------ILWNDVRTSKQCQEITDRLGQRLLEITKNIALEGFTLPKILWLQENEPEVWSRVKKIMLPKDYLS 162          
The following BLAST results are available for this feature:
BLAST of FC878357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
FGGY_HUMAN7.650e-4049.70FGGY carbohydrate kinase domain-containing protein... [more]
FGGY_MOUSE2.907e-3948.52FGGY carbohydrate kinase domain-containing protein... [more]
FGGY_XENLA3.929e-3645.56FGGY carbohydrate kinase domain-containing protein... [more]
FGGY_DANRE4.066e-3344.38FGGY carbohydrate kinase domain-containing protein... [more]
YDR09_YEAST4.495e-3241.90Uncharacterized sugar kinase YDR109C OS=Saccharomy... [more]
MPA43_YEAST5.167e-1229.55Protein MPA43 OS=Saccharomyces cerevisiae GN=MPA43... [more]
XYLB_LACLA9.744e-1129.94Xylulose kinase OS=Lactococcus lactis subsp. lacti... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ7YA22RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ7YA22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878357 ID=FC878357; Name=FC878357; organism=Citrus clementina; type=EST; length=657bp
AGAAGAGCGTGGGCCGATACGACGCCACTTCTTGACCAAAAACACCGATC
TTCTATCTCTCCAATCTATAACACCAACCGCATATCCTACGCCGCCGGCG
GCCTCCTCGAGATGGCCTACGCCACCGCACCTCCCGCTCGTTCCCGCTCC
GTCTTTCTCGGCGTCGACGTCGGCACTGGCAGTGCCCGCGCAGGTTTGTT
TGATGAGAGTGGAAAACTTCTTGGATCTGCTAGTAGCCCAATACAAATAT
GGAAAGAGGGTGACTGCATTGAGCAATCATCAACGGATATTTGGCATGCA
ATCTGTGCTGCTGTTGATTCAGCTTGCTCTCTTGCAAATGTTGACGGGGA
AGAAGTAAAGGGCGTGGGTTTTGCAGCCACTTGTTCGCTTGTTGCAGTGG
ATGCTGATGGCTCTCCAGTTTCAGTTTCTTGGAATGGTGATTCTAGGAGA
AACATTATCGTGTGGATGGACCATAGAGCTGTAAAGCAAGCTGAGAAGAT
CAATTCTCGCAATTCACCAGTGTTACAATACTGTGGTGGAGCTGTTTCCC
CTGAGATGCAGCCACCAAAGCTTTTATGGGTGAAAGAAAATTTGCGAGAA
TCTTGGTCGATGGTATTTAGGTGGATGGACTTGAGTGATTGGTTGTCGTA
TAGGGGC
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