FC878365
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878365 vs. ExPASy Swiss-Prot
Match: WDR53_MOUSE (WD repeat-containing protein 53 OS=Mus musculus GN=Wdr53 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.892e-22 Identity = 67/203 (33.00%), Postives = 105/203 (51.72%), Query Frame = 2 Query: 56 GHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENN-----GNAGQCYNPAFVHAIAI 649 GH ++ C A++D G VAS GE G + + + + G VTS+ F + +Y S G+ + DV L+ ++ N+EEIN + N S LA ADD G +KI+D+ + + +SL+ HS+ICSSV F P +P ++S GLD ++++W K RP I N E G+ NPA H++++ Sbjct: 8 GHSSSILCLNANKD--GLVASGGEGGDLVAWGEDGTPLGHMQLEGADDVTSVLFSASCPTKLYASHGETISVLDVRSLKG--SLDHFHVNEEEINCLSLNETESLLASADDSGAIKILDLEKKKVTRSLKR-HSNICSSVAFRPQRPQSLVSCGLDMQVMLWSLQKARPVWITNLQEDETEETEGPQTPGRLLNPALAHSVSV 205
BLAST of FC878365 vs. ExPASy Swiss-Prot
Match: WDR53_BOVIN (WD repeat-containing protein 53 OS=Bos taurus GN=WDR53 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.189e-22 Identity = 69/207 (33.33%), Postives = 107/207 (51.69%), Query Frame = 2 Query: 56 GHKATATCCIASRDRPGFVASSGEDG-CICWFDLRSKDVQLVTDV---GNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENN-----GNAGQCYNPAFVHAIAI 649 GH + C AS++ G VAS E G + W +D L+ G VT++ F +Y S G+ + DV + PL+ ++ N+EEIN + N + LA ADD G +KI+D+ + +SL+ HS+ICSSV F P +P ++S GLD ++++W+ K RP I N E + GQ NPA H++++ Sbjct: 8 GHSSPILCLNASQE--GLVASGAEGGDLVVW----GEDGTLLGHTCFQGAEDVTNVLFSPSCPTKLYASHGETISILDVR--SLKEPLDDFHVNEEEINCLSLNETENLLASADDSGTIKILDLENKKISRSLKR-HSNICSSVAFRPQRPQSLVSCGLDMQVMLWNLRKARPLWITNLQEDETEEMESPQSPGQLLNPALAHSVSV 205
BLAST of FC878365 vs. ExPASy Swiss-Prot
Match: WDR53_HUMAN (WD repeat-containing protein 53 OS=Homo sapiens GN=WDR53 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.732e-21 Identity = 66/203 (32.51%), Postives = 101/203 (49.75%), Query Frame = 2 Query: 56 GHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNFGLPENN-----GNAGQCYNPAFVHAIAI 649 GH + C AS++ G +AS E G + + + G VTS+ F +Y S G+ + DV L+ ++ N+EEIN + N + LA ADD G +KI+D+ + +SL+ HS+ICSSV F P +P ++S GLD ++++W K RP I N E + GQ NPA H+I++ Sbjct: 8 GHSSPVLCLNASKE--GLLASGAEGGDLTAWGEDGTPLGHTRFQGADDVTSVLFSPSCPTKLYASHGETISVLDVRSLKD--SLDHFHVNEEEINCLSLNQTENLLASADDSGAIKILDLENKKVIRSLKR-HSNICSSVAFRPQRPQSLVSCGLDMQVMLWSLQKARPLWITNLQEDETEEMEGPQSPGQLLNPALAHSISV 205
BLAST of FC878365 vs. ExPASy Swiss-Prot
Match: WDR53_DICDI (WD repeat-containing protein 53 homolog OS=Dictyostelium discoideum GN=wdr53 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.339e-19 Identity = 72/247 (29.15%), Postives = 118/247 (47.77%), Query Frame = 2 Query: 47 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRS-KDVQLVTDVGNG-PVTSLCFKSGNEDIIYVSSGKEVKSFDVHMP-ASWRPLES-YNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEVISGGLDSKLVMWDFSKGRPNKIVNF---GLPENNGNAGQ----------CYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIES 736 +L GHK T C I+S ++ +AS +D + +DL + K +Q + + G PV ++CF + +Y S + SFD+ P + + Y +N EEINQ+ + K +LA DD G KIID+ ++ L +SL H++I + F P E+I+ +D ++ WDF K + F LP+N + Q NP FV ++ +K ++ GDG + + I S Sbjct: 24 KLIGHKDTVLC-ISSHNKKEIIASGSDDCTVRIWDLNTNKSIQSIVEGFQGNPVNNVCFDQ--DFTLYCSYDNIIVSFDLRQPNVILKEFNTQYKFNTEEINQLSFDSKYQYLAACDDSGQTKIIDVTKNKLVESLNKKHTNIATGCVFRPNSKNELITSSMDFSIIHWDFLKAKVLHRDTFKEGSLPQNISKSQQQQQETTEPNRMLNPPFVTSVD------CSNNSKYVAISMGDGTIVINEISS 261 The following BLAST results are available for this feature:
BLAST of FC878365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878365 ID=FC878365; Name=FC878365; organism=Citrus clementina; type=EST; length=899bpback to top |