FC878367
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878367 vs. ExPASy Swiss-Prot
Match: DCE_PETHY (Glutamate decarboxylase OS=Petunia hybrida GN=GAD PE=1 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.948e-51 Identity = 105/153 (68.63%), Postives = 123/153 (80.39%), Query Frame = 1 Query: 4 ENAMVLKEGLETTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDSLPSKV---LVPASEQNGRNG----KKTEIETQREVTTYWRKFVSERKANNKNKIC 441 ENA VL+EGLE TGRFNI+SK+ GVPLVAFSLKDN++H+EFE++E LRRFGWIVPAYTMP +AQHITVLRVVIREDFSRTLAERLV DI KVLHELD+LP++V L A EQ NG KKT+ E Q E+ T W+KFV E+K N++C Sbjct: 349 ENASVLREGLEKTGRFNIISKEIGVPLVAFSLKDNRQHNEFEISETLRRFGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVRDIEKVLHELDTLPARVNAKLAVAEEQAAANGSEVHKKTDSEVQLEMITAWKKFVEEKK-KKTNRVC 500
BLAST of FC878367 vs. ExPASy Swiss-Prot
Match: DCE2_ARATH (Glutamate decarboxylase 2 OS=Arabidopsis thaliana GN=GAD2 PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 8.028e-49 Identity = 103/148 (69.59%), Postives = 117/148 (79.05%), Query Frame = 1 Query: 4 ENAMVLKEGLETTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDSLPSKVLVPASEQNGRNG-------KKTEIETQREVTTYWRKFVSERKANN 426 EN +VLKEG+E T RFNIVSKD+GVP+VAFSLKD+ H+EFE++E+LRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLV DI+KVLHELD+LPSK+ S++ G G KK E E EV WRKFV ERK N Sbjct: 348 ENMVVLKEGIEKTERFNIVSKDQGVPVVAFSLKDHSFHNEFEISEMLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVADISKVLHELDTLPSKI----SKKMGIEGIAENVKEKKMEKEILMEVIVGWRKFVKERKKMN 491
BLAST of FC878367 vs. ExPASy Swiss-Prot
Match: DCE1_ARATH (Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2) HSP 1 Score: 187.963 bits (476), Expect = 3.373e-47 Identity = 97/148 (65.54%), Postives = 118/148 (79.73%), Query Frame = 1 Query: 4 ENAMVLKEGLETTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDSLPSKVL------VPASEQNGRN----GKKTEIETQREVTTYWRKFVSERK 417 EN +VL+EGLE T RFNIVSKDEGVPLVAFSLKD+ H EFE++++LRR+GWIVPAYTMP +AQHITVLRVVIREDFSRTLAERLV+DI KV+ ELD LPS+V+ SE N N KK++I+ QR++ T W+KFV++RK Sbjct: 349 ENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELDELPSRVIHKISLGQEKSESNSDNLMVTVKKSDIDKQRDIITGWKKFVADRK 496
BLAST of FC878367 vs. ExPASy Swiss-Prot
Match: DCE_SOLLC (Glutamate decarboxylase OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.499e-36 Identity = 81/147 (55.10%), Postives = 101/147 (68.71%), Query Frame = 1 Query: 7 NAMVLKEGLETTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDSLPSK-----VLVPASEQNGRNG------KKTEIETQREVTTYWRKFVSER 414 NA VL EG+ GRF+IVSKD GVP+VAFSL+D+ ++ FEV+E LRRFGWIVPAYTMP DA+HI VLRVVIREDFS +LAERLV DI K+L ELD+ P + V V A E G +ETQ+++ +WRK ++ Sbjct: 351 NAKVLTEGITKMGRFDIVSKDVGVPVVAFSLRDSSKYTVFEVSEHLRRFGWIVPAYTMPPDAEHIAVLRVVIREDFSHSLAERLVSDIEKILSELDTQPPRLPTKAVRVTAEEVRDDKGDGLHHFHMDTVETQKDIIKHWRKIAGKK 497 The following BLAST results are available for this feature:
BLAST of FC878367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878367 ID=FC878367; Name=FC878367; organism=Citrus clementina; type=EST; length=620bpback to top |