FC878382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: HACL1_RAT (2-hydroxyacyl-CoA lyase 1 OS=Rattus norvegicus GN=Hacl1 PE=1 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.296e-57 Identity = 113/280 (40.36%), Postives = 164/280 (58.57%), Query Frame = 2 Query: 32 QIDGNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVL---HQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHPLXXXXXRSLAIGQCDVALVVGARLN 862 Q+ G + A++L +MFGVVGIPVT +A A +LG+++I NEQ LTG+PG+ L VSGPG +H L G++N +N WP+++I GS ++ G FQE QVEA + +SKF+ + I +P + + + ++ GRPG CY+D+P D++ T S+ ET S + A S+L+ AK+PL++ GKGAAY+ AE ++KLVE +PFLPTPMGKG++PD HP RS A+ DV ++ GARLN Sbjct: 16 QVSGAKVIAQALKTQDVEYMFGVVGIPVTEIALAAQELGIKYIGMRNEQAACYAASAVGYLTGRPGVCLVVSGPGLIHALGGMANANMNCWPLIVIGGSSERNQEAMGAFQEFPQVEACRLYSKFSARPSSIQHIPFVIEKAVRSSIYGRPGACYIDVPADLVTLQESTTSIKYKECCMPPPLSLAET--------SAVRAAASVLRSAKQPLLIIGKGAAYSHAEDSIRKLVELCNLPFLPTPMGKGVVPDNHPNCVGAARSRALQFADVIVLFGARLN 287
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: HACL1_MOUSE (2-hydroxyacyl-CoA lyase 1 OS=Mus musculus GN=Hacl1 PE=1 SV=2) HSP 1 Score: 221.476 bits (563), Expect = 4.924e-57 Identity = 109/277 (39.35%), Postives = 162/277 (58.48%), Query Frame = 2 Query: 32 QIDGNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHPLXXXXXRSLAIGQCDVALVVGARLN 862 Q+ G + A++L +MFGVVGIPVT +A A +LG+++I NEQ LTG+PG+ L VSGPG +H L G++N +N WP+++I GS ++ G FQE QVEA + ++KF+ + I +P + + + ++ GRPG CY+D+P D + +V + S + A S+L++AK+PL++ GKGAAY+ AE ++KLVE +PFLPTPMGKG++PD HP RS A+ DV ++ GARLN Sbjct: 16 QVSGAKVIAQALKTQDVEYMFGVVGIPVTEIALAAQELGIKYIGMRNEQAACYAASAVGYLTGRPGVCLVVSGPGLIHALGGMANANMNCWPLIVIGGSSERNQEAMGAFQEFPQVEACRLYTKFSARPSTIELIPFIIEKAVRSSIYGRPGACYIDIPADFVTLQANVTSIKYKECCMPPPVSMAE-----TSAVCAAASVLRDAKQPLLIIGKGAAYSHAEDSIRKLVEQCSLPFLPTPMGKGVVPDNHPNCVGAARSRALQSADVIVLFGARLN 287
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: HACL1_HUMAN (2-hydroxyacyl-CoA lyase 1 OS=Homo sapiens GN=HACL1 PE=1 SV=2) HSP 1 Score: 219.55 bits (558), Expect = 1.871e-56 Identity = 109/277 (39.35%), Postives = 162/277 (58.48%), Query Frame = 2 Query: 32 QIDGNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHPLXXXXXRSLAIGQCDVALVVGARLN 862 Q+ G + A++L ++FG+VGIPVT +A A QLG+++I NEQ LT +PG+ L VSGPG +H L G++N +N WP+++I GS ++ G FQE QVEA + ++KF+ + I +P + + + ++ GRPG CY+D+P D ++ ++V I S + A S+++ AK+PL++ GKGAAYA AE +KKLVE +PFLPTPMGKG++PD HP RS A+ DV ++ GARLN Sbjct: 13 QVSGAKVIAQALKTQDVEYIFGIVGIPVTEIAIAAQQLGIKYIGMRNEQAACYAASAIGYLTSRPGVCLVVSGPGLIHALGGMANANMNCWPLLVIGGSSERNQETMGAFQEFPQVEACRLYTKFSARPSSIEAIPFVIEKAVRSSIYGRPGACYVDIPADFVNLQVNVNSIKYMERCMSPPISMAE-----TSAVCTAASVIRNAKQPLLIIGKGAAYAHAEESIKKLVEQYKLPFLPTPMGKGVVPDNHPYCVGAARSRALQFADVIVLFGARLN 284
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: OXC_OXAFO (Oxalyl-CoA decarboxylase OS=Oxalobacter formigenes GN=oxc PE=1 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 6.020e-55 Identity = 113/287 (39.37%), Postives = 170/287 (59.23%), Query Frame = 2 Query: 11 LQNSQNAQI-DGNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQK--DFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHPLXXXXXRSLAIGQCDVALVVGARLN 862 + N N ++ DG + +L + M+GVVGIP+T+LA + G RF +F +EQ + GKPG+ LTVS PG ++G+ L++ N +P++++SGS +++ D +GD++E+DQ+ +P K + + I ++P +A+ + AVSGRPGG Y+DLP + QTISV I+ I +A L+K AK+P+I+ GKGAAYA+ + E++ LVE TGIPFLP M KGLLPD HP R+ A+ QCDV +++GARLN Sbjct: 1 MSNDDNVELTDGFHVLIDALKMNDIDTMYGVVGIPITNLARMWQDDGQRFYSFRHEQHAGYAASIAGYIEGKPGVCLTVSAPGFLNGVTSLAHATTNCFPMILLSGSSEREIVDLQQGDYEEMDQMNVARPHCKASFRINSIKDIPIGIARAVRTAVSGRPGGVYVDLPAKLFGQTISVEEANKLLFKP---IDPAPAQIPAEDAIARAADLIKNAKRPVIMLGKGAAYAQCDDEIRALVEETGIPFLPMGMAKGLLPDNHPQSAAATRAFALAQCDVCVLIGARLN 284
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: OXC_ECOLI (Probable oxalyl-CoA decarboxylase OS=Escherichia coli (strain K12) GN=oxc PE=1 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 8.692e-54 Identity = 115/284 (40.49%), Postives = 166/284 (58.45%), Query Frame = 2 Query: 17 NSQNAQIDGNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQK--DFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHPLXXXXXRSLAIGQCDVALVVGARLN 862 + Q DG + ++L ++GVVGIPVT +A A G+R+I F +EQ LT KPGI LTVS PG ++GL L+N +N +P++MISGS D+ D +GD++ELDQ+ A KP++K A + ++ +A+ + +VSGRPGG YLDLP +VL T+ + + A+SLL +A++PLI+ GKGAAY++A+ +L++ +ES IPFLP M KG+L DTHPL RS A+ DV ++VGARLN Sbjct: 2 SDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAEGIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPGGVYLDLPANVLAATMEKDEALTTIVKVENPSPALLP---CPKSVTSAISLLAKAERPLIILGKGAAYSQADEQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLN 282
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: OXC_ECO57 (Probable oxalyl-CoA decarboxylase OS=Escherichia coli O157:H7 GN=oxc PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 8.692e-54 Identity = 115/284 (40.49%), Postives = 166/284 (58.45%), Query Frame = 2 Query: 17 NSQNAQIDGNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQK--DFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHPLXXXXXRSLAIGQCDVALVVGARLN 862 + Q DG + ++L ++GVVGIPVT +A A G+R+I F +EQ LT KPGI LTVS PG ++GL L+N +N +P++MISGS D+ D +GD++ELDQ+ A KP++K A + ++ +A+ + +VSGRPGG YLDLP +VL T+ + + A+SLL +A++PLI+ GKGAAY++A+ +L++ +ES IPFLP M KG+L DTHPL RS A+ DV ++VGARLN Sbjct: 2 SDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAEGIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPGGVYLDLPANVLAATMEKDEALTTIVKVENPSPALLP---CPKSVTSAISLLAKAERPLIILGKGAAYSQADEQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLN 282
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: HACL1_DICDI (Probable 2-hydroxyacyl-CoA lyase 1 OS=Dictyostelium discoideum GN=hacl1 PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.796e-52 Identity = 114/278 (41.01%), Postives = 154/278 (55.40%), Query Frame = 2 Query: 35 IDGNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSD--IDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHPLXXXXXRSLAIGQCDVALVVGARLN 862 +DG + AKS+ +FG+VG+P+T +A GV F F NEQ LTG PG+ +TVSGPG VH LAG+ N N WP++++S S DQ G+G FQE Q E+ + + K +I P+ + +E ++S RPG Y+ +P D+ I T+ +V I AV LL EAK+PL++ GKGAAY R+E EL + +E+T IPFLP+PMGKGLL D HPL RS A+ DV LV+GARLN Sbjct: 1 MDGVEIIAKSIKNSAIEKVFGIVGVPITPIAYELQAQGVGFFGFRNEQSCSYAASIVGYLTGLPGLCMTVSGPGVVHALAGVLNAQSNGWPMILLSSSIDQSLVGKGGFQECKQFESAELYCKKCYYLTEIDHFPEILKDAIETSLSNRPGPVYIQIPADL----IKSKCKESPNIREAAGYGTIAIKSVVPDMKLIKDAVQLLSEAKRPLVIGGKGAAYCRSENELLEFIEATKIPFLPSPMGKGLLRDDHPLVVGAARSYALKNADVVLVLGARLN 274
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: YGK4_SCHPO (Putative 2-hydroxyacyl-CoA lyase OS=Schizosaccharomyces pombe GN=SPBC725.04 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 6.887e-51 Identity = 110/276 (39.86%), Postives = 152/276 (55.07%), Query Frame = 2 Query: 35 IDGNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHPLXXXXXRSLAIGQCDVALVVGARLN 862 I + L AK+L +FG+VGIPV + G+RF+ F NEQ LT +PG+ + V GPG VH +AG+ N N WP+++++GS + G FQELDQV + P +K AV+ V + + +++G PG CY+DLP + + T+ I + + + + KA LK AK PL+V GKGAAYA AE +L + VE TGIPFLP+PMGKGLLP++HPL RS A+ DV L+ GARLN Sbjct: 3 ISFSELVAKTLLDLEVKVVFGIVGIPVIEICEAIQASGIRFVGFRNEQSAAYAATAYGYLTQRPGVCVVVGGPGVVHAMAGVFNSKTNRWPLLLLAGSSETFQQNCGAFQELDQVSYLSPHTKLAVRPPSPKMVVDSIRRAYRVSMTGTPGTCYVDLPANYIESTVD-----DFPKDPLPPIPSSPKCAPDPTQLQKAAYYLKNAKAPLLVVGKGAAYACAEKQLLEFVEHTGIPFLPSPMGKGLLPESHPLNVSSARSAALRNADVVLLAGARLN 273
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: YEC0_YEAST (Putative 2-hydroxyacyl-CoA lyase OS=Saccharomyces cerevisiae GN=YEL020C PE=1 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.391e-43 Identity = 104/271 (38.38%), Postives = 143/271 (52.77%), Query Frame = 2 Query: 56 AKSLSLFGATHMFGVVGIPVTSLANLAVQLGVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKP--LIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHPLXXXXXRSLAIGQCDVALVVGARLN 862 A+ L +G +FG+VGIP+ LA+ V G++FI NEQ ++ KPG+LL V GPG +H LAG+ N M N WP+++I+GS Q D +G FQELDQV + PF KF K + + L + G G Y+D+P D + I T G S I K V L+ + K LIV GKGA + E+++LV + +PFLPTPM KG++PD+ PL RS A+ D+ LV+GARLN Sbjct: 10 AQLLQKYGIDTVFGIVGIPIVQLADTMVANGIKFIPCRNEQAASYAASAYGYISDKPGVLLIVGGPGLIHALAGIYNSMSNRWPLLVIAGSSSQSDIHKGGFQELDQVSLLSPFLKFTGKLTP-DNIDMITQKALNYCIQGTAGVSYIDVPADFIEYE-KPLEGNDRTGNELPMILTPNICGPDPSKIKKVVQLILQHKNKNILIVIGKGA--VKNSHEIRRLVNTFNLPFLPTPMAKGIVPDSSPLNVSSARSQALKIADIVLVLGARLN 276
BLAST of FC878382 vs. ExPASy Swiss-Prot
Match: ILVI_BUCBP (Acetolactate synthase large subunit OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ilvI PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.397e-27 Identity = 83/284 (29.23%), Postives = 130/284 (45.77%), Query Frame = 2 Query: 35 IDGNTLAAKSLSLFGATHMFGVVGIPVTSLANLAVQL-GVRFIAFHNEQXXXXXXXXXXXLTGKPGILLTVSGPGCVHGLAGLSNGMINTWPIVMISGSCDQKDFGRGDFQELDQVEAVKPFSKFAVKAKDITEVPKCVAQVLERAVSGRPGGCYLDLPTDVLHQTISVXXXXXXXXXXXXXIETVTQGGIVNSDIDKAVSLLKEAKKPLIVFGKGAAYARAEGELKKLVESTGIPFLPTPMGKGLLPDTHP-------LXXXXXRSLAIGQCDVALVVGARLN 862 + G+ + +SL G ++FG G V + + Q+ G++ I +EQ TGK G++L SGPG + + G++ +++ P+V+ISG G FQE D + +P K + K+ ++PK + A SGRPG +DLP D+L+ I V QG I KA+ +L +AK+P+I G G + + ELK L E+ IP + M G LP HP + ++AI DV L +G R + Sbjct: 4 LSGSDMVIRSLIDQGIKYIFGYPGGAVLDIYDSLKQMHGIKHILVRHEQSATHMADGYARATGKIGVVLVTSGPGATNSITGIATAYMDSIPLVVISGQVASSLIGYDAFQECDMIGISRPIVKHSFLVKNTEDIPKIFKKAFWLASSGRPGPIVIDLPKDILNPLIK-KPYIWPKLISIRSYSPVLQGH--QGQIKKALHILIKAKQPIIYIGGGIITSNSHKELKLLAETLNIPVTTSLMALGALPQNHPQNLKMLGMHGTYEANMAIHNADVILAIGVRFD 284 The following BLAST results are available for this feature:
BLAST of FC878382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878382 ID=FC878382; Name=FC878382; organism=Citrus clementina; type=EST; length=864bpback to top |