FC878388

Overview
NameFC878388
Unique NameFC878388
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length246
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:164..409. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC878388 vs. ExPASy Swiss-Prot
Match: SAHH_TOBAC (Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAHH PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 9.983e-40
Identity = 78/81 (96.30%), Postives = 80/81 (98.77%), Query Frame = 2 
Query:    2 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD 244
            E+KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD
Sbjct:   13 EYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD 93
[Close]
BLAST of FC878388 vs. ExPASy Swiss-Prot
Match: SAHH_NICSY (Adenosylhomocysteinase OS=Nicotiana sylvestris GN=SAHH PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 9.983e-40
Identity = 78/81 (96.30%), Postives = 80/81 (98.77%), Query Frame = 2 
Query:    2 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD 244
            E+KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD
Sbjct:   13 EYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD 93
[Close]
BLAST of FC878388 vs. ExPASy Swiss-Prot
Match: SAHH_MESCR (Adenosylhomocysteinase OS=Mesembryanthemum crystallinum GN=SAHH PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 9.983e-40
Identity = 78/81 (96.30%), Postives = 80/81 (98.77%), Query Frame = 2 
Query:    2 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD 244
            E+KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD
Sbjct:   13 EYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD 93
[Close]
BLAST of FC878388 vs. ExPASy Swiss-Prot
Match: SAHH_PHASS (Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.304e-39
Identity = 78/81 (96.30%), Postives = 81/81 (100.00%), Query Frame = 2 
Query:    2 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD 244
            E+KVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGA+I+GSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD
Sbjct:   13 EYKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGARISGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD 93
[Close]
BLAST of FC878388 vs. ExPASy Swiss-Prot
Match: SAHH_CATRO (Adenosylhomocysteinase OS=Catharanthus roseus GN=SAHH PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.224e-39
Identity = 77/81 (95.06%), Postives = 81/81 (100.00%), Query Frame = 2 
Query:    2 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD 244
            E+KVKD+SQADFGRLEIELAEVEMPGLM+CRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ+
Sbjct:   13 EYKVKDMSQADFGRLEIELAEVEMPGLMSCRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQE 93
[Close]
BLAST of FC878388 vs. ExPASy Swiss-Prot
Match: SAHH1_ARATH (Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.794e-39
Identity = 76/81 (93.83%), Postives = 80/81 (98.77%), Query Frame = 2 
Query:    2 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD 244
            E+KVKD+SQADFGRLE+ELAEVEMPGLMACR EFGPSQPFKGA+ITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD
Sbjct:   13 EYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD 93
[Close]
BLAST of FC878388 vs. ExPASy Swiss-Prot
Match: SAHH_MEDSA (Adenosylhomocysteinase OS=Medicago sativa GN=SAHH PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 4.955e-39
Identity = 76/81 (93.83%), Postives = 80/81 (98.77%), Query Frame = 2 
Query:    2 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD 244
            E+KVKD+SQADFGRLEIELAEVEMPGLM+CR EFGPSQPFKGA+ITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD
Sbjct:   13 EYKVKDMSQADFGRLEIELAEVEMPGLMSCRTEFGPSQPFKGARITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD 93
[Close]
BLAST of FC878388 vs. ExPASy Swiss-Prot
Match: SAHH_LUPLU (Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.104e-38
Identity = 77/81 (95.06%), Postives = 80/81 (98.77%), Query Frame = 2 
Query:    2 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD 244
            E+KVKD+SQADFGRLEIELAEVEMPGLMA R+EFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD
Sbjct:   13 EYKVKDMSQADFGRLEIELAEVEMPGLMASRSEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD 93
[Close]
BLAST of FC878388 vs. ExPASy Swiss-Prot
Match: SAHH_WHEAT (Adenosylhomocysteinase OS=Triticum aestivum GN=SAHH PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 9.344e-38
Identity = 74/81 (91.36%), Postives = 79/81 (97.53%), Query Frame = 2 
Query:    2 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD 244
            E+KVKDL QADFGRLE+ELAEVEMPGLMACR EFGPSQPFKGA+I+GSLHMTIQTAVLIETLTALGAEVRWCSCNIFS+QD
Sbjct:   13 EYKVKDLFQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARISGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSSQD 93
[Close]
BLAST of FC878388 vs. ExPASy Swiss-Prot
Match: SAHH_PETCR (Adenosylhomocysteinase OS=Petroselinum crispum GN=SAHH PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 1.594e-37
Identity = 73/81 (90.12%), Postives = 78/81 (96.30%), Query Frame = 2 
Query:    2 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQD 244
            E+KVKD+S ADFGRLE+ELAEVEMPGLM+CR EFGPSQPFKGA+ITGSLHMTIQT VLIETLTALGAEVRWCSCNIFSTQD
Sbjct:   13 EYKVKDMSLADFGRLELELAEVEMPGLMSCRTEFGPSQPFKGARITGSLHMTIQTGVLIETLTALGAEVRWCSCNIFSTQD 93
The following BLAST results are available for this feature:
BLAST of FC878388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 222
Match NameE-valueIdentityDescription
SAHH_TOBAC9.983e-4096.30Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAH... [more]
SAHH_NICSY9.983e-4096.30Adenosylhomocysteinase OS=Nicotiana sylvestris GN=... [more]
SAHH_MESCR9.983e-4096.30Adenosylhomocysteinase OS=Mesembryanthemum crystal... [more]
SAHH_PHASS1.304e-3996.30Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH... [more]
SAHH_CATRO2.224e-3995.06Adenosylhomocysteinase OS=Catharanthus roseus GN=S... [more]
SAHH1_ARATH3.794e-3993.83Adenosylhomocysteinase 1 OS=Arabidopsis thaliana G... [more]
SAHH_MEDSA4.955e-3993.83Adenosylhomocysteinase OS=Medicago sativa GN=SAHH ... [more]
SAHH_LUPLU1.104e-3895.06Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH P... [more]
SAHH_WHEAT9.344e-3891.36Adenosylhomocysteinase OS=Triticum aestivum GN=SAH... [more]
SAHH_PETCR1.594e-3790.12Adenosylhomocysteinase OS=Petroselinum crispum GN=... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA15CB01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15CB01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878388 ID=FC878388; Name=FC878388; organism=Citrus clementina; type=EST; length=246bp
TGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGGCCGCCTCGAAA
TCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAG
TTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACCGGTTCACTCCA
CATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCACCGCTCTCGGCG
CCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCCAAGACCA
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