FC878395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: WIPI3_XENTR (WD repeat domain phosphoinositide-interacting protein 3 OS=Xenopus tropicalis GN=wdr45l PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.408e-37 Identity = 78/156 (50.00%), Postives = 104/156 (66.67%), Query Frame = 3 Query: 285 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFV-DLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQRGQVRI 749 L+ +NQD+GCFA G GFR+YN +P KE +++ GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL RDRIVVVL+ I V++F + LH ET NP+GLC L +S+ S+LA PG G V+I Sbjct: 13 LLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVGYVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPGAHTGHVQI 168
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: WIPI3_CHICK (WD repeat domain phosphoinositide-interacting protein 3 OS=Gallus gallus GN=WDR45L PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.408e-37 Identity = 78/156 (50.00%), Postives = 104/156 (66.67%), Query Frame = 3 Query: 285 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFV-DLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQRGQVRI 749 L+ +NQD+GCFA G GFR+YN +P KE +++ GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL RDRIVVVL+ I V++F + LH ET NP+GLC L +S+ S+LA PG G V+I Sbjct: 13 LLYAGFNQDHGCFACGMENGFRVYNADPLKEKEKQEFPEGGVGHVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPGTHTGHVQI 168
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: WIPI3_XENLA (WD repeat domain phosphoinositide-interacting protein 3 OS=Xenopus laevis GN=wdr45l PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.839e-37 Identity = 78/156 (50.00%), Postives = 104/156 (66.67%), Query Frame = 3 Query: 285 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFV-DLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQRGQVRI 749 L+ +NQD+GCFA G GFR+YN +P KE +++ GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL RDRIVVVL+ I V++F + LH ET NP+GLC L +S+ S+LA PG G V+I Sbjct: 13 LLYSGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVSYVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPGAHTGHVQI 168
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: WIPI3_PONAB (WD repeat domain phosphoinositide-interacting protein 3 OS=Pongo abelii GN=WDR45L PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.098e-37 Identity = 77/156 (49.36%), Postives = 104/156 (66.67%), Query Frame = 3 Query: 285 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFV-DLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQRGQVRI 749 L+ +NQD+GCFA G GFR+YN +P KE +++ GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL RDRIVVVL+ I V++F + LH ET NP+GLC L +S+ S+LA PG G V++ Sbjct: 13 LLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVGHVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPGTHTGHVQL 168
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: WIPI3_MOUSE (WD repeat domain phosphoinositide-interacting protein 3 OS=Mus musculus GN=Wdr45l PE=2 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 4.098e-37 Identity = 77/156 (49.36%), Postives = 104/156 (66.67%), Query Frame = 3 Query: 285 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFV-DLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQRGQVRI 749 L+ +NQD+GCFA G GFR+YN +P KE +++ GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL RDRIVVVL+ I V++F + LH ET NP+GLC L +S+ S+LA PG G V++ Sbjct: 13 LLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVGHVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPGTHTGHVQL 168
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: WIPI3_HUMAN (WD repeat domain phosphoinositide-interacting protein 3 OS=Homo sapiens GN=WDR45L PE=2 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 4.098e-37 Identity = 77/156 (49.36%), Postives = 104/156 (66.67%), Query Frame = 3 Query: 285 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFV-DLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQRGQVRI 749 L+ +NQD+GCFA G GFR+YN +P KE +++ GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL RDRIVVVL+ I V++F + LH ET NP+GLC L +S+ S+LA PG G V++ Sbjct: 13 LLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVGHVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPGTHTGHVQL 168
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: WIPI3_DANRE (WD repeat domain phosphoinositide-interacting protein 3 OS=Danio rerio GN=wdr45l PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.352e-37 Identity = 84/181 (46.41%), Postives = 111/181 (61.33%), Query Frame = 3 Query: 285 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFV-DLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKL---INAHDSHIACFT 815 L+ +NQD+GCFA G GFR+YN +P KE + + GG VEMLFRCN LALVG G +YPP KV+IWDD + + + E F ++V++VKL RDRIVVVL+ I V++F + LH ET NP+GLC L +S+ S+LA P G V+I N K I AH+ + C T Sbjct: 13 LLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKHEFLEGGVGHVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPATHSGHVQIVDLA-NTEKPPVDIPAHEGVLCCIT 192
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: ATG18_CANGA (Autophagy-related protein 18 OS=Candida glabrata GN=ATG18 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.492e-26 Identity = 63/148 (42.57%), Postives = 93/148 (62.84%), Query Frame = 3 Query: 279 IELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACP 722 + + +++NQ C + GTS GF I+NC PF + + D SGG+ IVEMLF ++LALVG GD P ++ I + + I E F + + SVK++R RIVVVL+ +IY+Y +++LLH IE NP GL LS ++ T++LA P Sbjct: 6 VSIYYLNFNQTGTCISMGTSNGFLIFNCAPFGKFYSED--SGGYGIVEMLFSTSLLALVGIGDQPMLSPRRLRIINTKKHSIICEVTFPTKILSVKMNRSRIVVVLKEQIYIYDINNMRLLHTIEIAPNPEGLVALSCNTDTNLLAYP 151
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: ATG18_YEAST (Autophagy-related protein 18 OS=Saccharomyces cerevisiae GN=ATG18 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.250e-26 Identity = 61/143 (42.66%), Postives = 90/143 (62.94%), Query Frame = 3 Query: 294 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACP 722 +++NQ C + GTS GF+I+NCEPF + + D SGG+ IVEMLF ++LALVG GD P ++ I + + I E F + + SVK+++ R+VV+L+ +IY+Y ++LLH IET NPRGL +S + S L P Sbjct: 11 INFNQTGTCISLGTSKGFKIFNCEPFGKFYSED--SGGYAIVEMLFSTSLLALVGIGDQPALSPRRLRIINTKKHSIICEVTFPTSILSVKMNKSRLVVLLQEQIYIYDINTMRLLHTIETNPNPRGLMAMSPSVANSYLVYP 151
BLAST of FC878395 vs. ExPASy Swiss-Prot
Match: ATG18_YEAS7 (Autophagy-related protein 18 OS=Saccharomyces cerevisiae (strain YJM789) GN=ATG18 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.250e-26 Identity = 61/143 (42.66%), Postives = 90/143 (62.94%), Query Frame = 3 Query: 294 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACP 722 +++NQ C + GTS GF+I+NCEPF + + D SGG+ IVEMLF ++LALVG GD P ++ I + + I E F + + SVK+++ R+VV+L+ +IY+Y ++LLH IET NPRGL +S + S L P Sbjct: 11 INFNQTGTCISLGTSKGFKIFNCEPFGKFYSED--SGGYAIVEMLFSTSLLALVGIGDQPALSPRRLRIINTKKHSIICEVTFPTSILSVKMNKSRLVVLLQEQIYIYDINTMRLLHTIETNPNPRGLMAMSPSVANSYLVYP 151 The following BLAST results are available for this feature:
BLAST of FC878395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878395 ID=FC878395; Name=FC878395; organism=Citrus clementina; type=EST; length=830bpback to top |