FC878396
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878396 vs. ExPASy Swiss-Prot
Match: THRC1_ARATH (Threonine synthase 1, chloroplastic OS=Arabidopsis thaliana GN=TS1 PE=1 SV=1) HSP 1 Score: 417.542 bits (1072), Expect = 4.764e-116 Identity = 216/281 (76.87%), Postives = 227/281 (80.78%), Query Frame = 1 Query: 46 MASCSLFHPQT-----KIKPFNQNHPR-LTYHPPTVISCSFXXXXXXXXXXXXXXXXXXXXXDENIRDEARRQRSTTNNTFSAKYVPFNAGPDSPEFYSLDEIVYRSRSGGLLDVQHDMESLKKFDGAYWRDLFDSRVGKTTWPYGSGVWSKKEWVLPEIDPDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDT 870 MAS LF+ K P ++ L H P VISC+ ++NIRDEARR RS N FSAKYVPFNA P S E YSLDEIVYRSRSGGLLDV+HDME+LK+FDGAYWRDLFDSRVGK+TWPYGSGVWSKKEWVLPEID DDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKIS+AQLVQPIANGAFVLSIDT Sbjct: 1 MASSCLFNASVSSLNPKQDPIRRHRSTSLLRHRPVVISCT--ADGNNIKAPIETAVKPPHRTEDNIRDEARRNRSNAVNPFSAKYVPFNAAPGSTESYSLDEIVYRSRSGGLLDVEHDMEALKRFDGAYWRDLFDSRVGKSTWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDT 279
BLAST of FC878396 vs. ExPASy Swiss-Prot
Match: THRC_SOLTU (Threonine synthase, chloroplastic OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 405.986 bits (1042), Expect = 1.434e-112 Identity = 199/219 (90.87%), Postives = 208/219 (94.98%), Query Frame = 1 Query: 214 DENIRDEARRQRSTTNNTFSAKYVPFNAGPDSPEFYSLDEIVYRSRSGGLLDVQHDMESLKKFDGAYWRDLFDSRVGKTTWPYGSGVWSKKEWVLPEIDPDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDT 870 DENIR+EARR S+ N FSA+YVPFNAGP+S E+YSLDEIVYRSRSGGLLDVQHDM++LKKFDG YWR LFDSRVGKTTWPYGSGVWSKKEWVLPEID DDIVSAFEGNSNLFWAERFGKQFLGM DLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKM +PVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKIS+AQLVQPIANGAFVLSIDT Sbjct: 56 DENIREEARRHCSSHN--FSARYVPFNAGPNSDEWYSLDEIVYRSRSGGLLDVQHDMDALKKFDGQYWRSLFDSRVGKTTWPYGSGVWSKKEWVLPEIDSDDIVSAFEGNSNLFWAERFGKQFLGMTDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMHKPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDT 272
BLAST of FC878396 vs. ExPASy Swiss-Prot
Match: THRC2_ARATH (Threonine synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TS2 PE=1 SV=1) HSP 1 Score: 382.489 bits (981), Expect = 1.698e-105 Identity = 196/275 (71.27%), Postives = 215/275 (78.18%), Query Frame = 1 Query: 46 MASCSLFHPQTKIKPFNQNHPRLTYHPPTVISCSFXXXXXXXXXXXXXXXXXXXXXDENIRDEARRQRSTTNNTFSAKYVPFNAGPDSPEFYSLDEIVYRSRSGGLLDVQHDMESLKKFDGAYWRDLFDSRVGKTTWPYGSGVWSKKEWVLPEIDPDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDT 870 MAS SL H T + +H + P + S + DENIRDEARR+ N SA+YVPFNA P S E YSLDEIVYRS+SG LLDVQHD +LK++DG +WR+LFDSRVGKT WPYGSGVWSKKEWVLPEID DDIVSAFEGNSNLFWAERFGKQ+L MNDLWVKHCGISHTGSFKDLGM+VLVSQVNRLRKM +PV+GVGCASTGDTSAALSAYCASAGIPSIVFLPA+KIS+AQLVQPIANGAFVLSIDT Sbjct: 1 MASFSLPHSAT----YFPSHSETSLKPHSAASFTVRCTSASPAVPPQTPQKPRRSPDENIRDEARRRPHQLQN-LSARYVPFNAPPSSTESYSLDEIVYRSQSGALLDVQHDFAALKRYDGEFWRNLFDSRVGKTNWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERFGKQYLQMNDLWVKHCGISHTGSFKDLGMSVLVSQVNRLRKMNKPVIGVGCASTGDTSAALSAYCASAGIPSIVFLPADKISMAQLVQPIANGAFVLSIDT 270
BLAST of FC878396 vs. ExPASy Swiss-Prot
Match: THRC_METJA (Probable threonine synthase OS=Methanocaldococcus jannaschii GN=thrC PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.775e-23 Identity = 72/182 (39.56%), Postives = 104/182 (57.14%), Query Frame = 1 Query: 319 YSLDEIVYRSRSGGLLDVQHDMESLKKFDGAYWRDLFDSRVGKTTWPYGSGVWSKKEWVLPEIDPDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSI 864 Y +DEI+Y GGLL++ +D E +K + + ++ K GVW E+ LP D IVS EG + L+ K+ LG+ +L+VK+ G + TGSFKD GMTV V++ N L V VGCASTG+TSA+L+AY A +G IV LP K+++ +L Q + GA V+ + Sbjct: 12 YDVDEIIYTCECGGLLEIIYDYEEIKD-------KVSEEKLRKRE----IGVWRYLEY-LPVKDESKIVSLCEGGTPLYRCNNLEKE-LGIKELYVKNEGANPTGSFKDRGMTVGVTRANELG-----VEVVGCASTGNTSASLAAYSARSGKKCIVLLPEGKVALGKLAQAMFYGAKVIQV 175
BLAST of FC878396 vs. ExPASy Swiss-Prot
Match: THRC_SYNY3 (Threonine synthase OS=Synechocystis sp. (strain PCC 6803) GN=thrC PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.526e-13 Identity = 46/124 (37.10%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 496 LPEIDPDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSID 867 LP D +V+ EGN+ L A K+ ++VK+ G++ TGSFKD GMT+ +S+ + V CASTG+TSAA +AY AG+ + V +P +++ +L Q + GA V++ID Sbjct: 45 LPVSDQTPVVTLLEGNTPLIPAPAIAKRIGKDVRVFVKYDGLNPTGSFKDRGMTMAISKAK-----EAGAKAVICASTGNTSAAAAAYARRAGLRAFVIIPDGYVALGKLGQALIYGAEVIAID 163
BLAST of FC878396 vs. ExPASy Swiss-Prot
Match: THRC_MYCLE (Probable threonine synthase OS=Mycobacterium leprae GN=thrC PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.292e-12 Identity = 54/138 (39.13%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 454 WPYGSGVWSKKEWVLPEIDPDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSID 867 WP GV + LP D V+ EG + L A R +Q L V+ G++ TGSFKD GMT+ V+ L + +R V+ CASTG+TSA+ +AY A AGI V +P KI++ +L Q + +GA ++ ID Sbjct: 12 WP---GVIAAYRDRLPVGDDWTPVTLLEGGTPLIAAPRLSEQTGCTIHLKVE--GLNPTGSFKDRGMTMAVTDA--LARGQRAVL---CASTGNTSASAAAYAARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQID 139
BLAST of FC878396 vs. ExPASy Swiss-Prot
Match: THRC_BACHD (Threonine synthase OS=Bacillus halodurans GN=thrC PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.292e-12 Identity = 49/132 (37.12%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 469 GVWSKKEWVLPEIDPDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSI 864 G+ + + LP + +++ EGN+ L E K++ G+ +VK+ G + TGSFKD GM + V++ + R ++ CASTG+TSAA +AY A AG+ IV +P KI++ +L Q + GA VL I Sbjct: 6 GLLQEYKEFLPVTEETPLLTLGEGNTPLIPLENLSKEW-GVK-AYVKYEGANPTGSFKDRGMVMAVAKAKE--EGSRTII---CASTGNTSAAAAAYGARAGLRCIVVIPEGKIALGKLAQAVMYGAEVLEI 130
BLAST of FC878396 vs. ExPASy Swiss-Prot
Match: THRC_BACSU (Threonine synthase OS=Bacillus subtilis GN=thrC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.204e-12 Identity = 47/124 (37.90%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 496 LPEIDPDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSID 867 LP D ++ EGN+ L + +Q LG+ +L VK G++ TGSFKD GM + V++ + CASTG+TSAA +AY A A + IV +P KI+ +L Q + GA +++ID Sbjct: 13 LPVTDQTPALTLHEGNTPLIHLPKLSEQ-LGI-ELHVKTEGVNPTGSFKDRGMVMAVAKAKEEGNDT-----IMCASTGNTSAAAAAYAARANMKCIVIIPNGKIAFGKLAQAVMYGAEIIAID 129
BLAST of FC878396 vs. ExPASy Swiss-Prot
Match: THRC_MYCTU (Probable threonine synthase OS=Mycobacterium tuberculosis GN=thrC PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12 Identity = 54/138 (39.13%), Postives = 75/138 (54.35%), Query Frame = 1 Query: 454 WPYGSGVWSKKEWVLPEIDPDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSID 867 WP GV + LP D V+ EG + L A KQ L V+ G++ TGSFKD GMT+ V+ L +R V+ CASTG+TSA+ +AY A AGI V +P KI++ +L Q + +GA ++ ID Sbjct: 12 WP---GVIAAYRDRLPVGDDWTPVTLLEGGTPLIAATNLSKQTGCTIHLKVE--GLNPTGSFKDRGMTMAVTDA--LAHGQRAVL---CASTGNTSASAAAYAARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQID 139
BLAST of FC878396 vs. ExPASy Swiss-Prot
Match: THRC_MYCBO (Probable threonine synthase OS=Mycobacterium bovis GN=thrC PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12 Identity = 54/138 (39.13%), Postives = 75/138 (54.35%), Query Frame = 1 Query: 454 WPYGSGVWSKKEWVLPEIDPDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSID 867 WP GV + LP D V+ EG + L A KQ L V+ G++ TGSFKD GMT+ V+ L +R V+ CASTG+TSA+ +AY A AGI V +P KI++ +L Q + +GA ++ ID Sbjct: 12 WP---GVIAAYRDRLPVGDDWTPVTLLEGGTPLIAATNLSKQTGCTIHLKVE--GLNPTGSFKDRGMTMAVTDA--LAHGQRAVL---CASTGNTSASAAAYAARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQID 139 The following BLAST results are available for this feature:
BLAST of FC878396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878396 ID=FC878396; Name=FC878396; organism=Citrus clementina; type=EST; length=872bpback to top |