FC891026
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC891026 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 3.038e-41 Identity = 86/170 (50.59%), Postives = 109/170 (64.12%), Query Frame = 2 Query: 5 GERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEERPYPRRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNXXXXXXXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNVGDRLFKYETPAVI-RSKFVTL 511 G RK +RIYDYA YNDLGNPDK K+ RP+L GE+ PYPRRCRTGRPPT T+ L ESR+EKPHP+YVPRDE FEE+KQ FSSGRL+AVLH F F ID LY G LK +++ K+ L I++ + + +Y+TP+++ + KF L Sbjct: 248 GVRKLSDRIYDYATYNDLGNPDKGKEFIRPILGGEKIPYPRRCRTGRPPTDTNMLAESRVEKPHPIYVPRDEAFEELKQGAFSSGRLRAVLHTLIPSLIASISAETHNFQGFHHIDNLYKEGLRLKLGLQEHLFQKIPLVQKIQE---SSEGMLRYDTPSILSKDKFAWL 414
BLAST of FC891026 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 9.774e-40 Identity = 85/164 (51.83%), Postives = 103/164 (62.80%), Query Frame = 2 Query: 2 KGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEERPYPRRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNXXXXXXXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNVGDRLFKYETPAVIR 493 KGERK HERIYDY VYNDLG+P K + + RPVL E PYPRRCRTGRP DP CESR ++ YVPRDE FEEIK++TF +GR KA+ HN FTCFSDID LY S +L + ++ F+ + LNV + L KY+TPAVI+ Sbjct: 245 KGERKPHERIYDYDVYNDLGDPRKTERV-RPVLGVPETPYPRRCRTGRPLVSKDPPCESRGKEKEEFYVPRDEVFEEIKRDTFRAGRFKALFHNLVPSIAAALSNLDIPFTCFSDIDNLYKSNIVLGHTEPKDTGLGGFIGGFMNGILNVTETLLKYDTPAVIK 407
BLAST of FC891026 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.411e-38 Identity = 82/163 (50.31%), Postives = 101/163 (61.96%), Query Frame = 2 Query: 2 KGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEERPYPRRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNXXXXXXXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNVGDRLFKYETPAVI 490 KGERK +RIYDY VYND+GNPD ++LARP L G E PYPRRCRTGR T TD + E R+EKP P+YVPRDE FEE KQNTF++ RLKAVLHN F F +ID LY G LLK + + K L ++ + L +Y+TP ++ Sbjct: 257 KGERKLSDRIYDYDVYNDIGNPDISRELARPTLGGREFPYPRRCRTGRSSTDTDMMSERRVEKPLPMYVPRDEQFEESKQNTFAACRLKAVLHN--LIPSLKASILAEDFANFGEIDSLYKEGLLLKLGFQDDMFKKFPLPKIVTTLQKSSEGLLRYDTPKIV 417
BLAST of FC891026 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.943e-36 Identity = 82/163 (50.31%), Postives = 103/163 (63.19%), Query Frame = 2 Query: 5 GERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEERPYPRRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNXXXXXXXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNVGDR-LFKYETPAVI 490 G RK +RIYD+ VYNDLGNPDK +L+RP L G+E PYPRRCRTGR T +D ESR+EKP P+YVPRDE FEE KQ+TF++GRLKAVLH+ F F +ID+LY G LLK + + K L V+ L + L KY+TP ++ Sbjct: 252 GVRKLSDRIYDFDVYNDLGNPDKSSELSRPKLGGKEVPYPRRCRTGRQSTVSDKDAESRVEKPLPMYVPRDEQFEESKQDTFAAGRLKAVLHH--LIPSLKASIVAEDFADFGEIDRLYKEGLLLKLGFQDDIFKKFPLPKVVVDTLQESTKGLLKYDTPKIL 412
BLAST of FC891026 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 5.194e-33 Identity = 78/171 (45.61%), Postives = 97/171 (56.73%), Query Frame = 2 Query: 5 GERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEERPYPRRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNXXXXXXXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLF-LATVIKQFLNVGDRLFKYETPAVI-RSKFVTL 511 GER+ +R+YDY VYNDLGNPDK ARPVL GE+ PYPRR RTGRP T TD ESR+E P P+YV RDE FEE K S G +KA+LHN F F D+D L+ G LK Q +LF +++ + L +Y+TP +I + KF L Sbjct: 234 GERRITDRVYDYDVYNDLGNPDKGVASARPVLGGEQMPYPRRMRTGRPSTATDASAESRVEYPEPIYVSRDEEFEEGKNEMLSEGAIKALLHNFMPLLVSSVSPDIRDFAGFHDVDNLFKEGLRLK----QALHDQLFQKIPFVRKIQENSEGLLRYDTPDIIKKDKFAWL 400
BLAST of FC891026 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.014e-28 Identity = 74/179 (41.34%), Postives = 96/179 (53.63%), Query Frame = 2 Query: 5 GERKHHERIYDYAVYNDLGNPDKDKD-LARPVLSGEERPYPRRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNXXXXXXXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNVGD-----------RLFKYETPAV-IRSKF 502 GERK H+RIYDY VYNDLGNPD D + RPVL G+E PYPRRCRTGRP +K DP E R K H +YVPRDE F E K F + + + LH F S ID+LY+ F + + G+ + + + + L++ R+FK+ETP + R KF Sbjct: 247 GERKEHDRIYDYDVYNDLGNPDDDNNPTTRPVLGGKEHPYPRRCRTGRPRSKKDPFSEERSHKEH-IYVPRDEAFTERKMGAFDTKKFMSQLH-ALTTGLKTAKHKSQSFPSLSAIDQLYDDNFRNQPVQPEGGKLRFVIDLLETELLHLFKLEGAAFLEGIRRVFKFETPEIHDRDKF 423
BLAST of FC891026 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.571e-28 Identity = 70/172 (40.70%), Postives = 93/172 (54.07%), Query Frame = 2 Query: 5 GERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEERPYPRRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNXXXXXXXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNVGD-----------RLFKYETPAV 487 GERK H+RIYDY VYNDLG P+ RPVL G+E PYPRRCRTGRP +KTDP E K +YVPRDETF E K+ F + +L + LH F + ID LY+ F + + G+ +L L + K+ +++ R+FK+ETP + Sbjct: 250 GERKKHDRIYDYDVYNDLGKPESK----RPVLGGKEHPYPRRCRTGRPRSKTDPSSEEESHKKGEMYVPRDETFTERKEQAFLTKQLLSQLHG-LCTGLKVNKDILPSFPTLASIDALYDDDFRNQPVQPEGGKVRLILDLLAKELVHLVKLEGAEFVEGIRRVFKFETPEI 416
BLAST of FC891026 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.259e-27 Identity = 78/180 (43.33%), Postives = 101/180 (56.11%), Query Frame = 2 Query: 5 GERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYPRRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLH---NXXXXXXXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKL-FLATVIKQFLNV-----GDRLFKYETPA-VIRSKFVTL 511 G+R+ +R+YDY VYNDLGNPD + DLARPVL G ++ PYPRRCRTGRPP+K DP E+R VYVPRDE F E+K F L++VLH F F IDKL+ G E G KL FL +++ + L + GD++ ++TPA V + KF L Sbjct: 269 GQREADDRVYDYDVYNDLGNPDSNGDLARPVLGGSKQFPYPRRCRTGRPPSKKDPKSETR---KGNVYVPRDEEFSEVKNAQFLLKTLQSVLHAAVPAAQSALIDNLSLNLPFPSFFVIDKLFEDGV------ELPGVEKLGFLHSIVPRLLELLRDSPGDKILLFDTPANVQKDKFAWL 439
BLAST of FC891026 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.265e-27 Identity = 69/169 (40.83%), Postives = 93/169 (55.03%), Query Frame = 2 Query: 8 ERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEERPYPRRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNXXXXXXXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLF---LATVIKQFLNVGDRLFKYETPAVI-RSKF 502 ERK HER+YDY YNDLG+PDK+ D RPVL +E PYPRRCRTGRP T DP E+R PVYVPRDE F ++K TFS+ L++ LH F+ F ID LY+ G L D + + V++ + + + ++E P ++ R +F Sbjct: 230 ERKFHERVYDYDTYNDLGDPDKNIDHKRPVLGTKEHPYPRRCRTGRPKTLYDPETETR---SSPVYVPRDEQFSDVKGRTFSATTLRSGLH-AILPAVAPLLNNSHGFSHFPAIDALYSDGIPLPVDGHGGNSFNVINDVIPRVVQMIEDTTEHVLRFEVPEMLERDRF 394
BLAST of FC891026 vs. ExPASy Swiss-Prot
Match: LOXB_SOLLC (Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.488e-27 Identity = 68/167 (40.72%), Postives = 89/167 (53.29%), Query Frame = 2 Query: 5 GERKHHERIYDYAVYNDLGNPDKDKDLARPVLSG-EERPYPRRCRTGRPPTKTDPLCESRIEKPH--PVYVPRDETFEEIKQNTFSSGRLKAVLHNXXXXXXXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYETPAVIR 493 G+ + +R+YDYA YNDLG PDK ++ ARP+L G E PYPRR RTGR PTK DP CESR P +YVPRDE F +K++ F + LK+ L F F+D+ LY G L + + + ++K L G L KY TP VI+ Sbjct: 188 GKLEEWDRVYDYACYNDLGEPDKGEEYARPILGGSSEYPYPRRGRTGREPTKADPNCESRNPLPMSLDIYVPRDERFGHVKKSDFLTSSLKSSLQTLLPAFKALCDNTPNEFNSFADVLNLYEGGIKLPEGPWLKAITDNISSEILKDILQTDGQGLLKYPTPQVIQ 354 The following BLAST results are available for this feature:
BLAST of FC891026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC891026 ID=FC891026; Name=FC891026; organism=Citrus clementina; type=EST; length=753bpback to top |