FC891030
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC891030 vs. ExPASy Swiss-Prot
Match: ELC_ARATH (Protein ELC OS=Arabidopsis thaliana GN=ELC PE=1 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 6.308e-77 Identity = 144/245 (58.78%), Postives = 167/245 (68.16%), Query Frame = 3 Query: 3 QFLSSVLSQRGPSALPYAEDTKWLIRQHLLTLISTFPSLDPKTATFTHNDGRSVNLLQADGTVPMPFQGVTYNIPVIIWLMESYPRHPPCVYVNPTRDMIIKRPHPHVTPSGLVSIPYLQNWIYPSSNLVDLVRELSACFSREPPLYXXXXXXXXXXXXXXXXXXXXXXXXAVMSNYGXXXXXXXXXXXXXXXXXXXYGG--------RXXXXXXTEDQTEVFKRNAVNKLVEMVHADITGMRKS 713 QFLSS LSQRGPS++PY E KWLIRQHLL LIS++PSL+PKTA+F HNDGRSVNLLQADGT+PMPF GVTYNIPVIIWL+ESYPRHPPCVYVNPT DMIIKRPH HVTPSGLVS+PYLQNW+YPSSNLVDLV +LSA F+R+PPLY + + YGG ++D EVFKRNA+NK+VEMVH+D+ MR++ Sbjct: 13 QFLSSALSQRGPSSVPYEESNKWLIRQHLLNLISSYPSLEPKTASFMHNDGRSVNLLQADGTIPMPFHGVTYNIPVIIWLLESYPRHPPCVYVNPTADMIIKRPHAHVTPSGLVSLPYLQNWVYPSSNLVDLVSDLSAAFARDPPLY------------SRRRPQPPPPSPPTVYDSSLSRPPSADQSLPRPFPPSPYGGGVSRVQVQHVHHQQQSDDAAEVFKRNAINKMVEMVHSDLVSMRRA 245
BLAST of FC891030 vs. ExPASy Swiss-Prot
Match: ELCL_ARATH (Protein ELC-like OS=Arabidopsis thaliana GN=ELCL PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.827e-74 Identity = 143/237 (60.34%), Postives = 166/237 (70.04%), Query Frame = 3 Query: 3 QFLSSVLSQRGPSALPYAEDTKWLIRQHLLTLISTFPSLDPKTATFTHNDGRSVNLLQADGTVPMPFQGVTYNIPVIIWLMESYPRHPPCVYVNPTRDMIIKRPHPHVTPSGLVSIPYLQNWIYPSSNLVDLVRELSACFSREPPLYXXXXXXXXXXXXXXXXXXXXXXXXAVMSNYGXXXXXXXXXXXXXXXXXXXYGGRXXXXXXTEDQTEVFKRNAVNKLVEMVHADITGMRKS 713 QFLSS L+QRGPSALPYAE+TK LIRQHLL LIS++ SLDPKTATFTHNDGRSV LLQADGT+PMPFQGV+YNIPV+IWL+ESYP++PPCVYVNPTRDMIIKRPH +V+PSGLVS+PYLQNWIYPSSNLVDL LSA FSR+PPLY ++ S Y R T+D EV+K+NA+N++VEMVH DI MR + Sbjct: 13 QFLSSALTQRGPSALPYAENTKSLIRQHLLNLISSYTSLDPKTATFTHNDGRSVILLQADGTIPMPFQGVSYNIPVVIWLLESYPQYPPCVYVNPTRDMIIKRPHSNVSPSGLVSLPYLQNWIYPSSNLVDLASHLSAAFSRDPPLY-------------SQRRPPPQPSPSIGSGY----------------------SRPLPPRQTDDAAEVYKKNAINRIVEMVHGDIVLMRSA 214
BLAST of FC891030 vs. ExPASy Swiss-Prot
Match: UEVLD_XENTR (Ubiquitin-conjugating enzyme E2 variant 3 OS=Xenopus tropicalis GN=uevld PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.603e-22 Identity = 51/121 (42.15%), Postives = 72/121 (59.50%), Query Frame = 3 Query: 81 QHLLTLISTFPSLDPKTATFTHNDGRSVNLLQADGTVPMPFQGVTYNIPVIIWLMESYPRHPPCVYVNPTRDMIIKRPHPHVTPSGLVSIPYLQNWIYPSSNLVDLVRELSACFSREPPLY 443 + L L TFPS T+T DG +LL GTVPM QG TYNIP+ +W+++S+P PP ++ P+ +M I R H+ G + +PYLQNW +P S + L+RE++ F E PLY Sbjct: 23 EELKDLNRTFPSFIFSMETYTFRDGSQKDLLNLTGTVPMKHQGTTYNIPICLWILDSHPFAPPLCFLKPSGNMGI-RVGRHIDAQGRIYLPYLQNWSHPKSTVTGLIREMAVKFEEELPLY 142
BLAST of FC891030 vs. ExPASy Swiss-Prot
Match: TS101_HUMAN (Tumor susceptibility gene 101 protein OS=Homo sapiens GN=TSG101 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 4.440e-22 Identity = 45/118 (38.14%), Postives = 74/118 (62.71%), Query Frame = 3 Query: 90 LTLISTFPSLDPKTATFTHNDGRSVNLLQADGTVPMPFQGVTYNIPVIIWLMESYPRHPPCVYVNPTRDMIIKRPHPHVTPSGLVSIPYLQNWIYPSSNLVDLVRELSACFSREPPLY 443 + +I+ + L P ++ NDG S L+ GT+P+P++G TYNIP+ +WL+++YP +PP +V PT M IK HV +G + +PYL W +P S+L+ L++ + F EPP++ Sbjct: 26 VNVITLYKDLKPVLDSYVFNDGSSRELMNLTGTIPVPYRGNTYNIPICLWLLDTYPYNPPICFVKPTSSMTIK-TGKHVDANGKIYLPYLHEWKHPQSDLLGLIQVMIVVFGDEPPVF 142
BLAST of FC891030 vs. ExPASy Swiss-Prot
Match: TS101_RAT (Tumor susceptibility gene 101 protein OS=Rattus norvegicus GN=Tsg101 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.428e-20 Identity = 43/118 (36.44%), Postives = 73/118 (61.86%), Query Frame = 3 Query: 90 LTLISTFPSLDPKTATFTHNDGRSVNLLQADGTVPMPFQGVTYNIPVIIWLMESYPRHPPCVYVNPTRDMIIKRPHPHVTPSGLVSIPYLQNWIYPSSNLVDLVRELSACFSREPPLY 443 + +I+ + L P ++ NDG S L+ GT+P+ ++G YNIP+ +WL+++YP +PP +V PT M IK HV +G + +PYL +W +P S L++L++ + F EPP++ Sbjct: 26 VNVIAMYKDLKPVLDSYVFNDGSSRELVNLTGTIPVRYRGNIYNIPICLWLLDTYPYNPPICFVKPTSSMTIK-TGKHVDANGKIYLPYLHDWKHPRSELLELIQIMIVIFGEEPPVF 142
BLAST of FC891030 vs. ExPASy Swiss-Prot
Match: TS101_MOUSE (Tumor susceptibility gene 101 protein OS=Mus musculus GN=Tsg101 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.428e-20 Identity = 43/118 (36.44%), Postives = 73/118 (61.86%), Query Frame = 3 Query: 90 LTLISTFPSLDPKTATFTHNDGRSVNLLQADGTVPMPFQGVTYNIPVIIWLMESYPRHPPCVYVNPTRDMIIKRPHPHVTPSGLVSIPYLQNWIYPSSNLVDLVRELSACFSREPPLY 443 + +I+ + L P ++ NDG S L+ GT+P+ ++G YNIP+ +WL+++YP +PP +V PT M IK HV +G + +PYL +W +P S L++L++ + F EPP++ Sbjct: 26 VNVIAMYKDLKPVLDSYVFNDGSSRELVNLTGTIPVRYRGNIYNIPICLWLLDTYPYNPPICFVKPTSSMTIK-TGKHVDANGKIYLPYLHDWKHPRSELLELIQIMIVIFGEEPPVF 142
BLAST of FC891030 vs. ExPASy Swiss-Prot
Match: UEVLD_MOUSE (Ubiquitin-conjugating enzyme E2 variant 3 OS=Mus musculus GN=Uevld PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.518e-19 Identity = 46/121 (38.02%), Postives = 69/121 (57.02%), Query Frame = 3 Query: 81 QHLLTLISTFPSLDPKTATFTHNDGRSVNLLQADGTVPMPFQGVTYNIPVIIWLMESYPRHPPCVYVNPTRDMIIKRPHPHVTPSGLVSIPYLQNWIYPSSNLVDLVRELSACFSREPPLY 443 + L + +FP T+ D +LL GT+P+ +QG TYNIP+ W+++S+P PP ++ PT +M I HV G + +PYLQNW +P S +V L++E+ A F E PLY Sbjct: 23 EELKNVSVSFPHFRYSVDTYVFKDTSQKDLLNFTGTIPVMYQGKTYNIPIRFWILDSHPFAPPICFLKPTANMEIS-VGKHVDAKGRIYLPYLQNWSHPKSAIVGLIKEMIAKFQEELPLY 142
BLAST of FC891030 vs. ExPASy Swiss-Prot
Match: UEVLD_DANRE (Ubiquitin-conjugating enzyme E2 variant 3 OS=Danio rerio GN=uevld PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.001e-19 Identity = 43/120 (35.83%), Postives = 70/120 (58.33%), Query Frame = 3 Query: 81 QHLLTLISTFPSLDPKTATFTHNDGRSVNLLQADGTVPMPFQGVTYNIPVIIWLMESYPRHPPCVYVNPTRDMIIKRPHPHVTPSGLVSIPYLQNWIYPSSNLVDLVRELSACFSREPPL 440 + L + +P + T+T +D +LL+ G +P+ +QG +YNIP+++WL++S+P PP Y+ PT M+I R HV G + +P L NW +P S++ L+ E+ F EPPL Sbjct: 23 EELQKVYRVYPDMKIMAGTYTSSDSLQKDLLKLVGNIPVVYQGRSYNIPILLWLLDSFPFTPPICYLRPTSSMVI-REGKHVDSKGRIHLPALHNWDHPKSSVNALLAEMIGKFEEEPPL 141
BLAST of FC891030 vs. ExPASy Swiss-Prot
Match: UEVLD_HUMAN (Ubiquitin-conjugating enzyme E2 variant 3 OS=Homo sapiens GN=UEVLD PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.280e-18 Identity = 44/112 (39.29%), Postives = 65/112 (58.04%), Query Frame = 3 Query: 108 FPSLDPKTATFTHNDGRSVNLLQADGTVPMPFQGVTYNIPVIIWLMESYPRHPPCVYVNPTRDMIIKRPHPHVTPSGLVSIPYLQNWIYPSSNLVDLVRELSACFSREPPLY 443 FP T+ D +LL GT+P+ +QG TYNIP+ W+++S+P PP ++ PT +M I HV G + +PYLQNW +P S +V L++E+ A F E P+Y Sbjct: 32 FPHFKYSMDTYVFKDSSQKDLLNFTGTIPVMYQGNTYNIPIRFWILDSHPFAPPICFLKPTANMGI-LVGKHVDAQGRIYLPYLQNWSHPKSVIVGLIKEMIAKFQEELPMY 142
BLAST of FC891030 vs. ExPASy Swiss-Prot
Match: TS101_DICDI (ESCRT-I complex subunit tsg101 OS=Dictyostelium discoideum GN=tsg101 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.096e-12 Identity = 36/98 (36.73%), Postives = 56/98 (57.14%), Query Frame = 3 Query: 75 IRQHLLTLISTFPSLDPKTATFTHNDGRSVNLLQADGTVPMPFQGVTYNIPVIIWLMESYPRHPPCVYVNPTRDMIIKRPHPHVTPSGLVSIPYLQNW 368 I + L FP+L P F N VNL+ GT+P+ F+G+ Y +P+I+W+ +YP+ P + ++PT +M I + H HV GLV PY+ +W Sbjct: 47 ISKDLKETFHLFPNLSP----FYENIPNRVNLICIKGTIPICFKGINYYLPIIVWVPLNYPQEFPTMVLDPTPEMRIVKNHHHVNLQGLVYHPYISSW 140 The following BLAST results are available for this feature:
BLAST of FC891030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC891030 ID=FC891030; Name=FC891030; organism=Citrus clementina; type=EST; length=788bpback to top |