FC891032

Overview
NameFC891032
Unique NameFC891032
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length932
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12552 contig Ccv1_Contig12552:87..1018. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC891032 vs. ExPASy Swiss-Prot
Match: TYRA2_ARATH (Arogenate dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=TYRAAT2 PE=1 SV=1)

HSP 1 Score: 372.859 bits (956), Expect = 1.486e-102
Identity = 182/251 (72.51%), Postives = 212/251 (84.46%), Query Frame = 1
Query:  178 IRAIDAAQPFDYESQLHTQYVKSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFVTHTMGRVLERFGVESSPINTKGYETLLDLVDNTKGDSFDLYYGL 930
            IRAIDAAQ FDYE+QL ++Y KS++LKIAV+GFGNFGQFL+K   RH H L+ HSRSD+S A    + A FF + +DLCE HPDVVLL TSILST+SVL+S PFQRL+RSTLFVDVLSVKEFP+ LF+KYLP++FDILCTHPMFGPES K SW  LPF+YDKVRIG+   R +R +KFL +F  EGC+MVEMSC  HD YAAGSQFVTHTMGRVLE++GVESSPINTKGYETLLDLV+NT  DSF+L+YGL
Sbjct:   34 IRAIDAAQIFDYETQLKSEYRKSSALKIAVLGFGNFGQFLSKTLIRHGHDLITHSRSDYSDAANS-IGARFFDNPHDLCEQHPDVVLLCTSILSTESVLRSFPFQRLRRSTLFVDVLSVKEFPKALFIKYLPKEFDILCTHPMFGPESGKHSWSGLPFVYDKVRIGDAASRQERCEKFLRIFENEGCKMVEMSCEKHDYYAAGSQFVTHTMGRVLEKYGVESSPINTKGYETLLDLVENTSSDSFELFYGL 283          
BLAST of FC891032 vs. ExPASy Swiss-Prot
Match: TYRA1_ARATH (Arogenate dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=TYRAAT1 PE=1 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 4.486e-91
Identity = 159/252 (63.10%), Postives = 201/252 (79.76%), Query Frame = 1
Query:  175 VIRAIDAAQPFDYESQLHTQYVKSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFVTHTMGRVLERFGVESSPINTKGYETLLDLVDNTKGDSFDLYYGL 930
            ++R+ D    ++Y SQ+       + LKI ++GFGNFGQFL K   +  HT+L +SRSD++    + L   +F+DL+DL E HP+V++L TSILST+ VL+S+PFQRLKRSTLFVDVLSVKEFPRNLFL+ LPQDFDILCTHPMFGPES K+ W NL F++DKVRIG D+ R  R + FLD+FA+EGCRMVEMSC +HD +AAGSQF+THT+GR+LE+  +ES+PI+TKGYETLL LV+NT GDSFDLYYGL
Sbjct:  339 MMRSEDVVVKYEYNSQVSGSVNDGSRLKIGIVGFGNFGQFLGKTMVKQGHTVLAYSRSDYTDEAAK-LGVSYFSDLDDLFEEHPEVIILCTSILSTEKVLESLPFQRLKRSTLFVDVLSVKEFPRNLFLQTLPQDFDILCTHPMFGPESGKNGWNNLAFVFDKVRIGMDDRRKSRCNSFLDIFAREGCRMVEMSCAEHDWHAAGSQFITHTVGRLLEKLSLESTPIDTKGYETLLKLVENTAGDSFDLYYGL 589          

HSP 2 Score: 303.908 bits (777), Expect = 8.479e-82
Identity = 146/228 (64.04%), Postives = 179/228 (78.51%), Query Frame = 1
Query:  253 LKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSS--WENLPFMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFVTHTMGRVLERFGVESSPINTKGYETLLDLVDNTKGDSFDLYYGL 930
            L+IA+IGFGN+GQFLA+      H L  HSRSDHS A R+ L   +F DL+DLCE HPDVVLL TSILS +++LK++PFQRL+R+TLFVDVLSVKEF + L L+YLP+DFDILCTHPMFGP+S  S+  W  L F+YDKVRIG +  R+ R + FL++F +EGC MVEMS  DHDK+AA SQF+THT+GR+L    + S+PINTKGYE LLDL +N  GDSFDLYYGL
Sbjct:   53 LRIAIIGFGNYGQFLAETLISQGHILFAHSRSDHSSAARR-LGVSYFTDLHDLCERHPDVVLLCTSILSIENILKTLPFQRLRRNTLFVDVLSVKEFAKTLLLQYLPEDFDILCTHPMFGPQSVSSNHGWRGLRFVYDKVRIGEERLRVSRCESFLEIFVREGCEMVEMSVTDHDKFAAESQFITHTLGRLLGMLKLISTPINTKGYEALLDLAENICGDSFDLYYGL 279          
The following BLAST results are available for this feature:
BLAST of FC891032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
TYRA2_ARATH1.486e-10272.51Arogenate dehydrogenase 2, chloroplastic OS=Arabid... [more]
TYRA1_ARATH4.486e-9163.10Arogenate dehydrogenase 1, chloroplastic OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA41CB06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA41CB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC891032 ID=FC891032; Name=FC891032; organism=Citrus clementina; type=EST; length=932bp
CAGTTCTCTAATCTCTTCCCAACAATGTTCTCGACAGCGTTCTCGACAAA
TCTCCCCAAAACAATCCCATCACTGCCGCCGCCACCACTACACTCATTCC
CTCCAATTGTCCCCTCATTTTCCCTCCCACTTTCCTCCCCCAAATCCCGC
CACCACCAGGGTCCACTCCGCCACGTCATCCGCGCAATCGACGCCGCCCA
GCCCTTCGACTATGAATCCCAACTCCACACCCAGTACGTGAAGAGCACGT
CCCTCAAAATCGCCGTCATTGGCTTCGGCAACTTTGGCCAATTCCTCGCC
AAGGCCTTCGCCCGCCACCACCACACCCTTCTCGTCCACTCCCGCTCCGA
TCACTCCCCCGCTGTCCGTCAACAACTCAACGCCCCCTTCTTCGCCGACC
TCAACGACCTTTGCGAGCTCCACCCCGACGTCGTTTTGCTGTCCACCTCC
ATCCTCTCCACCCAATCCGTCCTCAAATCAATCCCCTTCCAGCGGCTCAA
ACGCAGCACCCTCTTCGTGGACGTCCTTTCCGTTAAAGAATTCCCCAGAA
ACCTCTTCCTCAAGTACTTGCCTCAGGACTTTGATATTTTGTGCACGCAC
CCAATGTTTGGCCCCGAGAGTGCAAAAAGTTCGTGGGAAAATCTCCCTTT
TATGTATGATAAGGTTAGAATTGGAAATGACGAGGAAAGAATCAAAAGGG
TTGATAAATTTCTTGATGTATTCGCGAAAGAAGGGTGTAGGATGGTGGAA
ATGAGTTGTTTTGATCATGATAAGTATGCGGCGGGGTCTCAGTTTGTGAC
TCATACAATGGGGAGGGTGTTGGAGAGATTTGGAGTGGAGTCGTCGCCAA
TTAATACCAAAGGCTATGAGACATTGTTGGATTTGGTGGATAACACGAAA
GGGGATAGCTTTGATTTGTATTATGGGCTGTT
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