FC899926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC899926 vs. ExPASy Swiss-Prot
Match: UBCP_ARATH (Ubiquitin-like domain-containing CTD phosphatase OS=Arabidopsis thaliana GN=At4g06599 PE=2 SV=1) HSP 1 Score: 471.47 bits (1212), Expect = 2.940e-132 Identity = 228/272 (83.82%), Postives = 244/272 (89.71%), Query Frame = 3 Query: 87 TVKWSGKEYTVRVCGDDSVAELKRRICELTNVLPKRQKLLYPKIGNKLADDTVXXXXXXXXXXXXMTMIGTVEDEIIVDPVDSPEIIDDFELGQEEAVDIKDKEVNKQKLRRRVSQYKIKLRNPCREGKKLLVLDIDYTLFDHRSTAENPLQLMRPYLHEFLTAAYAEYDIMIWSATSMKWVELKMEELGVLTNPNYKITALLDHLAMITVQSDSRGIFDCKPLGLIWDQFPEFYSSKNTIMFDDLRRNFVMNPQNGLAIKPFRKAHANRDS 902 TVKW+GKEYTVR+C DDSVAELKRRIC LT VLPKRQKLLYPKIGNKL+DD++ MTMIGTVED+IIVD +SPEI+DDFELG+EEAVD+KDKEVNKQKLRRR+ QYKI LR PCR+GKKLLVLDIDYTLFDHRSTAENPLQLMRPYLHEFLTAAYAEYDIMIWSATSMKWVELKM ELGVL NPNYK+TALLDHLAMITVQSD+RGIFDCKPLGLIW PEFY+ NTIMFDDLRRNFVMNPQNGL IKPFRKAHANRD+ Sbjct: 27 TVKWNGKEYTVRICADDSVAELKRRICLLTTVLPKRQKLLYPKIGNKLSDDSLLLSSISFKPSLKMTMIGTVEDDIIVDQAESPEIVDDFELGKEEAVDVKDKEVNKQKLRRRIDQYKINLRTPCRQGKKLLVLDIDYTLFDHRSTAENPLQLMRPYLHEFLTAAYAEYDIMIWSATSMKWVELKMTELGVLNNPNYKVTALLDHLAMITVQSDTRGIFDCKPLGLIWALLPEFYNPGNTIMFDDLRRNFVMNPQNGLTIKPFRKAHANRDT 298
BLAST of FC899926 vs. ExPASy Swiss-Prot
Match: UBCP1_CHICK (Ubiquitin-like domain-containing CTD phosphatase 1 OS=Gallus gallus GN=UBLCP1 PE=2 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 1.025e-84 Identity = 154/274 (56.20%), Postives = 206/274 (75.18%), Query Frame = 3 Query: 90 VKWSGKEYTVR-VCGDDSVAELKRRICELTNVLPKRQKLLYPKIGNKLADDTVXXXXXXXXXXXXMTMIGTVED---EIIVDPVDSPEIIDDFELGQEEAVDIKDKEVNKQKLRRRVSQYKIKLRNPCREGKKLLVLDIDYTLFDHRSTAENPLQLMRPYLHEFLTAAYAEYDIMIWSATSMKWVELKMEELGVLTNPNYKITALLDHLAMITVQSDSRGIFDCKPLGLIWDQFPEFYSSKNTIMFDDLRRNFVMNPQNGLAIKPFRKAHANRD 899 +KW G+EYT+ + +D+V +LK+ + LT VLP+RQKLL K+ K ADD V + M+GT E+ +++ P D+ ++I+DF++ +EE V+++++E N K+ RRV +YK+++ NP REGKKLLVLD+DYTLFDHRS AE ++LMRPYLHEFLT+AY +YDI+IWSAT+MKW+E KM+ELGV TN NYKIT +LD AMITV + RG+ D KPLG+IW +F E+YS KNTIMFDD+ RNF+MNPQNGL I+PF KAH NRD Sbjct: 7 IKWGGQEYTITSLSEEDTVLDLKQSLKGLTGVLPERQKLLGLKMKGKPADDDVKLGALKLKPNTKIMMMGTREESLEDVLGPPPDNDDVINDFDI-EEEVVEVENREENLLKISRRVKEYKVEILNPPREGKKLLVLDVDYTLFDHRSCAETGVELMRPYLHEFLTSAYEDYDIVIWSATNMKWIEAKMKELGVSTNANYKITFMLDSAAMITVHTPRRGLIDVKPLGVIWGKFSEYYSKKNTIMFDDIGRNFLMNPQNGLKIRPFMKAHLNRD 279
BLAST of FC899926 vs. ExPASy Swiss-Prot
Match: UBCP1_RAT (Ubiquitin-like domain-containing CTD phosphatase 1 OS=Rattus norvegicus GN=Ublcp1 PE=2 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 2.981e-84 Identity = 154/274 (56.20%), Postives = 205/274 (74.82%), Query Frame = 3 Query: 90 VKWSGKEYTVRVCG-DDSVAELKRRICELTNVLPKRQKLLYPKIGNKLADDTVXXXXXXXXXXXXMTMIGTVED---EIIVDPVDSPEIIDDFELGQEEAVDIKDKEVNKQKLRRRVSQYKIKLRNPCREGKKLLVLDIDYTLFDHRSTAENPLQLMRPYLHEFLTAAYAEYDIMIWSATSMKWVELKMEELGVLTNPNYKITALLDHLAMITVQSDSRGIFDCKPLGLIWDQFPEFYSSKNTIMFDDLRRNFVMNPQNGLAIKPFRKAHANRD 899 VKW G+EY+V DD+V +LK+ + LT VLP+RQKLL K+ K A++ V + M+GT E+ +++ P D+ ++I+DF++ ++E V+++++E N K+ RRV +YK+++ NP REGKKLLVLD+DYTLFDHRS AE ++LMRPYLHEFLT+AY +YDI+IWSAT+MKW+E KM+ELGV TN NYKIT +LD AMITV + RG+ D KPLG+IW +F EFYS KNTIMFDD+ RNF+MNPQNGL I+PF KAH NRD Sbjct: 7 VKWGGQEYSVTTLSEDDTVLDLKQFLKTLTGVLPERQKLLGLKVKGKPAENDVKLGALKLKPNTKIMMMGTREESLEDVLCPPPDNDDVINDFDI-EDEVVEVENREENLLKISRRVKEYKVEVLNPPREGKKLLVLDVDYTLFDHRSCAETGVELMRPYLHEFLTSAYEDYDIVIWSATNMKWIEAKMKELGVSTNANYKITFMLDSAAMITVHTPRRGLIDVKPLGVIWGKFSEFYSKKNTIMFDDIGRNFLMNPQNGLKIRPFMKAHLNRD 279
BLAST of FC899926 vs. ExPASy Swiss-Prot
Match: UBCP1_MOUSE (Ubiquitin-like domain-containing CTD phosphatase 1 OS=Mus musculus GN=Ublcp1 PE=1 SV=1) HSP 1 Score: 311.612 bits (797), Expect = 3.893e-84 Identity = 154/274 (56.20%), Postives = 205/274 (74.82%), Query Frame = 3 Query: 90 VKWSGKEYTVRVCG-DDSVAELKRRICELTNVLPKRQKLLYPKIGNKLADDTVXXXXXXXXXXXXMTMIGTVED---EIIVDPVDSPEIIDDFELGQEEAVDIKDKEVNKQKLRRRVSQYKIKLRNPCREGKKLLVLDIDYTLFDHRSTAENPLQLMRPYLHEFLTAAYAEYDIMIWSATSMKWVELKMEELGVLTNPNYKITALLDHLAMITVQSDSRGIFDCKPLGLIWDQFPEFYSSKNTIMFDDLRRNFVMNPQNGLAIKPFRKAHANRD 899 VKW G+EY+V DD+V +LK+ + LT VLP+RQKLL K+ K A++ V + M+GT E+ +++ P D+ ++I+DF++ ++E V+++++E N K+ RRV +YK+++ NP REGKKLLVLD+DYTLFDHRS AE ++LMRPYLHEFLT+AY +YDI+IWSAT+MKW+E KM+ELGV TN NYKIT +LD AMITV + RG+ D KPLG+IW +F EFYS KNTIMFDD+ RNF+MNPQNGL I+PF KAH NRD Sbjct: 7 VKWGGQEYSVTTLSEDDTVLDLKQFLKTLTGVLPERQKLLGLKVKGKPAENDVKLGALKLKPNTKIMMMGTREESLEDVLCPPPDNDDVINDFDI-EDEVVEVENREENLLKVSRRVKEYKVEVLNPPREGKKLLVLDVDYTLFDHRSCAETGVELMRPYLHEFLTSAYEDYDIVIWSATNMKWIEAKMKELGVSTNANYKITFMLDSAAMITVHTPRRGLIDVKPLGVIWGKFSEFYSKKNTIMFDDIGRNFLMNPQNGLKIRPFMKAHLNRD 279
BLAST of FC899926 vs. ExPASy Swiss-Prot
Match: UBCP1_PONAB (Ubiquitin-like domain-containing CTD phosphatase 1 OS=Pongo abelii GN=UBLCP1 PE=2 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 5.085e-84 Identity = 153/274 (55.84%), Postives = 205/274 (74.82%), Query Frame = 3 Query: 90 VKWSGKEYTVRVCG-DDSVAELKRRICELTNVLPKRQKLLYPKIGNKLADDTVXXXXXXXXXXXXMTMIGTVED---EIIVDPVDSPEIIDDFELGQEEAVDIKDKEVNKQKLRRRVSQYKIKLRNPCREGKKLLVLDIDYTLFDHRSTAENPLQLMRPYLHEFLTAAYAEYDIMIWSATSMKWVELKMEELGVLTNPNYKITALLDHLAMITVQSDSRGIFDCKPLGLIWDQFPEFYSSKNTIMFDDLRRNFVMNPQNGLAIKPFRKAHANRD 899 VKW G+EY+V DD+V +LK+ + LT VLP+RQKLL K+ K A++ V + M+GT E+ +++ P D+ ++++DF++ ++E V+++++E N K+ RRV +YK+++ NP REGKKLLVLD+DYTLFDHRS AE ++LMRPYLHEFLT+AY +YDI+IWSAT+MKW+E KM+ELGV TN NYKIT +LD AMITV + RG+ D KPLG+IW +F EFYS KNTIMFDD+ RNF+MNPQNGL I+PF KAH NRD Sbjct: 7 VKWGGQEYSVTTLSEDDTVLDLKQFLKTLTGVLPERQKLLGLKVKGKPAENDVKLGALKLKPNTKIMMMGTREESLEDVLGPPPDNDDVVNDFDI-EDEVVEVENREENLLKISRRVKEYKVEILNPPREGKKLLVLDVDYTLFDHRSCAETGVELMRPYLHEFLTSAYEDYDIVIWSATNMKWIEAKMKELGVSTNANYKITFMLDSAAMITVHTPRRGLIDVKPLGVIWGKFSEFYSKKNTIMFDDIGRNFLMNPQNGLKIRPFMKAHLNRD 279
BLAST of FC899926 vs. ExPASy Swiss-Prot
Match: UBCP1_HUMAN (Ubiquitin-like domain-containing CTD phosphatase 1 OS=Homo sapiens GN=UBLCP1 PE=1 SV=2) HSP 1 Score: 311.227 bits (796), Expect = 5.085e-84 Identity = 153/274 (55.84%), Postives = 205/274 (74.82%), Query Frame = 3 Query: 90 VKWSGKEYTVRVCG-DDSVAELKRRICELTNVLPKRQKLLYPKIGNKLADDTVXXXXXXXXXXXXMTMIGTVED---EIIVDPVDSPEIIDDFELGQEEAVDIKDKEVNKQKLRRRVSQYKIKLRNPCREGKKLLVLDIDYTLFDHRSTAENPLQLMRPYLHEFLTAAYAEYDIMIWSATSMKWVELKMEELGVLTNPNYKITALLDHLAMITVQSDSRGIFDCKPLGLIWDQFPEFYSSKNTIMFDDLRRNFVMNPQNGLAIKPFRKAHANRD 899 VKW G+EY+V DD+V +LK+ + LT VLP+RQKLL K+ K A++ V + M+GT E+ +++ P D+ ++++DF++ ++E V+++++E N K+ RRV +YK+++ NP REGKKLLVLD+DYTLFDHRS AE ++LMRPYLHEFLT+AY +YDI+IWSAT+MKW+E KM+ELGV TN NYKIT +LD AMITV + RG+ D KPLG+IW +F EFYS KNTIMFDD+ RNF+MNPQNGL I+PF KAH NRD Sbjct: 7 VKWGGQEYSVTTLSEDDTVLDLKQFLKTLTGVLPERQKLLGLKVKGKPAENDVKLGALKLKPNTKIMMMGTREESLEDVLGPPPDNDDVVNDFDI-EDEVVEVENREENLLKISRRVKEYKVEILNPPREGKKLLVLDVDYTLFDHRSCAETGVELMRPYLHEFLTSAYEDYDIVIWSATNMKWIEAKMKELGVSTNANYKITFMLDSAAMITVHTPRRGLIDVKPLGVIWGKFSEFYSKKNTIMFDDIGRNFLMNPQNGLKIRPFMKAHLNRD 279
BLAST of FC899926 vs. ExPASy Swiss-Prot
Match: UBCP1_BOVIN (Ubiquitin-like domain-containing CTD phosphatase 1 OS=Bos taurus GN=UBLCP1 PE=2 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 5.085e-84 Identity = 153/274 (55.84%), Postives = 205/274 (74.82%), Query Frame = 3 Query: 90 VKWSGKEYTVRVCG-DDSVAELKRRICELTNVLPKRQKLLYPKIGNKLADDTVXXXXXXXXXXXXMTMIGTVED---EIIVDPVDSPEIIDDFELGQEEAVDIKDKEVNKQKLRRRVSQYKIKLRNPCREGKKLLVLDIDYTLFDHRSTAENPLQLMRPYLHEFLTAAYAEYDIMIWSATSMKWVELKMEELGVLTNPNYKITALLDHLAMITVQSDSRGIFDCKPLGLIWDQFPEFYSSKNTIMFDDLRRNFVMNPQNGLAIKPFRKAHANRD 899 VKW G+EY+V DD+V +LK+ + LT VLP+RQKLL K+ K A++ V + M+GT E+ +++ P D+ ++++DF++ ++E V+++++E N K+ RRV +YK+++ NP REGKKLLVLD+DYTLFDHRS AE ++LMRPYLHEFLT+AY +YDI+IWSAT+MKW+E KM+ELGV TN NYKIT +LD AMITV + RG+ D KPLG+IW +F EFYS KNTIMFDD+ RNF+MNPQNGL I+PF KAH NRD Sbjct: 7 VKWGGQEYSVTTLSEDDTVLDLKQFLKTLTGVLPERQKLLGLKVKGKPAENDVKLGALKLKPNTKIMMMGTREESLEDVLGPPPDNDDVVNDFDI-EDEVVEVENREENLLKISRRVKEYKVEILNPPREGKKLLVLDVDYTLFDHRSCAETGVELMRPYLHEFLTSAYEDYDIVIWSATNMKWIEAKMKELGVSTNANYKITFMLDSAAMITVHTPRRGLIDVKPLGVIWGKFSEFYSKKNTIMFDDIGRNFLMNPQNGLKIRPFMKAHLNRD 279
BLAST of FC899926 vs. ExPASy Swiss-Prot
Match: UBCP1_XENTR (Ubiquitin-like domain-containing CTD phosphatase 1 OS=Xenopus tropicalis GN=ublcp1 PE=2 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 1.172e-80 Identity = 149/274 (54.38%), Postives = 198/274 (72.26%), Query Frame = 3 Query: 90 VKWSGKEYTVRVCGD-DSVAELKRRICELTNVLPKRQKLLYPKIGNKLADDTVXXXXXXXXXXXXMTMIGTVED---EIIVDPVDSPEIIDDFELGQEEAVDIKDKEVNKQKLRRRVSQYKIKLRNPCREGKKLLVLDIDYTLFDHRSTAENPLQLMRPYLHEFLTAAYAEYDIMIWSATSMKWVELKMEELGVLTNPNYKITALLDHLAMITVQSDSRGIFDCKPLGLIWDQFPEFYSSKNTIMFDDLRRNFVMNPQNGLAIKPFRKAHANRD 899 +KW G+E+ + + D+V +LK + LT VLP+R KLL K K A++ V + M+GT E+ E++ P ++ E+++DF++ +EE V+++++E N K+ RRV YKI++ NP REGKKLLVLD+DYTLFDHRS AE +LMRPYLHEFLT+AY +YDI+IWSATSMKW+E KM+ELGV TN NYKIT +LD AMITV + RG+ D KPLG+IW ++ EFY+ NTIMFDD+ RNF+MNPQNGL I+PF KAH NRD Sbjct: 7 IKWGGQEFPLSALSEEDTVLDLKHSLKSLTGVLPERMKLLGLKYKGKPAENDVKLGVLKLKPNTKIMMMGTREESLEEMMAPPPENDEVVNDFDI-EEEVVEVENREENLAKISRRVKDYKIEILNPPREGKKLLVLDVDYTLFDHRSCAETGQELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEAKMKELGVSTNSNYKITFMLDSAAMITVHTPRRGLVDVKPLGVIWGKYGEFYNKNNTIMFDDIGRNFLMNPQNGLKIRPFMKAHLNRD 279
BLAST of FC899926 vs. ExPASy Swiss-Prot
Match: UBCP1_XENLA (Ubiquitin-like domain-containing CTD phosphatase 1 OS=Xenopus laevis GN=ublcp1 PE=2 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 1.172e-80 Identity = 149/274 (54.38%), Postives = 197/274 (71.90%), Query Frame = 3 Query: 90 VKWSGKEYTVRVCGD-DSVAELKRRICELTNVLPKRQKLLYPKIGNKLADDTVXXXXXXXXXXXXMTMIGTVED---EIIVDPVDSPEIIDDFELGQEEAVDIKDKEVNKQKLRRRVSQYKIKLRNPCREGKKLLVLDIDYTLFDHRSTAENPLQLMRPYLHEFLTAAYAEYDIMIWSATSMKWVELKMEELGVLTNPNYKITALLDHLAMITVQSDSRGIFDCKPLGLIWDQFPEFYSSKNTIMFDDLRRNFVMNPQNGLAIKPFRKAHANRD 899 +KW G+E+ + + D+V +LK + LT VLP+R KLL K K A++ V + M+GT E+ E++ P D+ E+++DF++ EE V+++++E N K+ RRV YK+++ NP REGKKLLVLD+DYTLFDHRS AE +LMRPYLHEFL++AY +YDI+IWSATSMKW+E KM+ELGV TN NYKIT +LD AMITV + RG+ D KPLG+IW ++ EFYS NTIMFDD+ RNF+MNPQNGL I+PF KAH NRD Sbjct: 7 IKWGGQEFPLSALSEEDTVLDLKHSLKSLTGVLPERMKLLGLKYKGKPAENDVKLGVLRLKPNTKIMMMGTREESLEEMMAPPPDNDEVVNDFDI-DEEVVEVENREENLAKISRRVKDYKVEVLNPPREGKKLLVLDVDYTLFDHRSCAETGQELMRPYLHEFLSSAYEDYDIVIWSATSMKWIEAKMKELGVTTNANYKITFMLDSAAMITVHTPRRGLVDVKPLGVIWGKYGEFYSKNNTIMFDDIGRNFLMNPQNGLKIRPFMKAHLNRD 279
BLAST of FC899926 vs. ExPASy Swiss-Prot
Match: UBCP1_DANRE (Ubiquitin-like domain-containing CTD phosphatase 1 OS=Danio rerio GN=ublcp1 PE=2 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 3.411e-80 Identity = 144/274 (52.55%), Postives = 200/274 (72.99%), Query Frame = 3 Query: 90 VKWSGKEYTVRVCGD-DSVAELKRRICELTNVLPKRQKLLYPKIGNKLADDTVXXXXXXXXXXXXMTMIGTVED---EIIVDPVDSPEIIDDFELGQEEAVDIKDKEVNKQKLRRRVSQYKIKLRNPCREGKKLLVLDIDYTLFDHRSTAENPLQLMRPYLHEFLTAAYAEYDIMIWSATSMKWVELKMEELGVLTNPNYKITALLDHLAMITVQSDSRGIFDCKPLGLIWDQFPEFYSSKNTIMFDDLRRNFVMNPQNGLAIKPFRKAHANRD 899 +KW G+EY++ + D+V +LK+ I LT VLP+RQKLL K+ K ADD V + M+GT E+ +++ P ++ ++++DF++ +EE +++++E N K+ RRV YK++ NP R GK+LLVLDIDYTLFDH+S AE +LMRP+LHEFLT+AY ++DI+IWSATSMKW++ KM+ELGV NPNYKIT +LD AMITV + RG+ + KPLG+IW ++ EFY+ KNTIMFDD+ RNF+MNPQNGL I+PF KAH NR+ Sbjct: 7 IKWGGQEYSINTLSEEDTVLDLKQSIKSLTGVLPERQKLLGLKLKGKPADDNVKLGDLKLKPNTKIMMMGTREESLEDVLAPPPENDDVVNDFDI-EEEVTEVENREENLAKIARRVKDYKVEELNPPRPGKRLLVLDIDYTLFDHKSCAETGHELMRPFLHEFLTSAYEDFDIVIWSATSMKWIDAKMKELGVTDNPNYKITFMLDSAAMITVHTPKRGVVEVKPLGVIWGKYSEFYNRKNTIMFDDIGRNFLMNPQNGLKIRPFMKAHLNRE 279 The following BLAST results are available for this feature:
BLAST of FC899926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC899926 ID=FC899926; Name=FC899926; organism=Citrus clementina; type=EST; length=902bpback to top |