FC910047
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYRC_YEAST (Arginyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=YDR341C PE=1 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.255e-55 Identity = 117/225 (52.00%), Postives = 149/225 (66.22%), Query Frame = 2 Query: 11 HVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRK-SELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVALMGLYESARIVLANGMKLLGLTPVERM 682 HV+FGMV Q MSTRKGTV+ L + L++ MH+VMKKNE+KY Q++ PE AD++GISA+M+QD GK N Y F ERM SFEGDTGPYLQYAH+RL S++R S + + NADFSL+ L+R L Q+PDV N +KT EP TV+TYLFK++ +SSCYD + + + E A + LY +AR VL NGM+LLGLTPVERM Sbjct: 399 HVNFGMV-----QGMSTRKGTVVFLDNILEETKEKMHEVMKKNENKYAQIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGPYLQYAHSRLRSVERNASGITQEKWINADFSLLKEPAAKLLIRLLGQYPDVLRNAIKTHEPTTVVTYLFKLTHQVSSCYD-----------VLWVAGQTEELATARLALYGAARQVLYNGMRLLGLTPVERM 607
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYRC_SCHPO (Probable arginyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=SPBC25B2.09c PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.179e-51 Identity = 107/229 (46.72%), Postives = 146/229 (63.76%), Query Frame = 2 Query: 2 KCGHVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVAL--MGLYESARIVLANGMKLLGLTPVERM 682 KC H+++G+V Q MSTRKG + L D ++ MH VM+KNE+KY QV++PE ADI+G +AI +QD +GK N Y FD RMTSFEGDTGPYLQYAH+RL S++R D E+ A+ L+T + +LVR L Q+PDV N + QE TV+TYLFK++ A+S YD +++ E+ + L + L+ +A+ VL NGM LLGLTP+ERM Sbjct: 408 KCVHINYGLV-----QGMSTRKGKAVFLDDIMEVAKEEMHKVMQKNEEKYAQVENPEEVADIVGKTAIRIQDSTGKRINNYAFDWSRMTSFEGDTGPYLQYAHSRLSSVRRNVNYTDEEIMGANLELLTEPDAYDLVRLLGQYPDVLKNAFRFQETSTVVTYLFKLTHAVSKLYD-------------ILWVRGRERDIQLARLALFGAAKQVLNNGMTLLGLTPLERM 618
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYRM_YEAST (Arginyl-tRNA synthetase, mitochondrial OS=Saccharomyces cerevisiae GN=MSR1 PE=2 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 7.634e-45 Identity = 99/225 (44.00%), Postives = 137/225 (60.89%), Query Frame = 2 Query: 11 HVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKR-KSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVALMGLYESARIVLANGMKLLGLTPVERM 682 H++FGMV Q MSTRKG V+ L LD+ + +M+ N+ K QV +P+ AD++G+SAI++QD K N Y F+ RM SFEGDTGPYLQY H+RL S++R S+ L +ADFS + + +ELVR LAQ+PDV +TQEP T++TYLFK+ +SSCY + K A + + + +Y ++R VL N M LLGL PV+RM Sbjct: 435 HINFGMV-----QGMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQVDNPQRVADLIGVSAIIIQDTKSKRINNYEFNWNRMLSFEGDTGPYLQYTHSRLRSLERTSSDFTTDMLIHADFSNLNEPQLVELVRLLAQYPDVLRRAFETQEPATIVTYLFKVCHQVSSCYKKIWVSGKPA-----------DIAIPRLAVYSASRQVLHNAMSLLGLVPVDRM 643
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYRC_DICDI (Probable arginyl-tRNA synthetase, cytoplasmic OS=Dictyostelium discoideum GN=argS1 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 3.207e-43 Identity = 93/226 (41.15%), Postives = 144/226 (63.72%), Query Frame = 2 Query: 11 HVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKV--ALMGLYESARIVLANGMKLLGLTPVERM 682 H+++GMVK MSTRKGTV+ L D L+ M +MK+NE K+ +++DPE ADI+G+SA+++QDF+ K Y+F+ +RM +GDTGPYLQYAHARLCS++RKS + + NA+ SL++ E L T+ ++P++ T EP T++ YLF+++ A+SS + V++ EK V A LY +A+++L +G+++LGL P+ERM Sbjct: 384 HINYGMVKG-----MSTRKGTVVFLEDILNKTQKKMLKIMKQNEQKFAEIEDPEKVADIVGLSAVVIQDFNAKRNKDYDFNWDRMLKSDGDTGPYLQYAHARLCSLERKSGFEFN--PNANLSLLSEPEAFNLAITIGRYPEIIQLTHNQLEPSTLVGYLFELAHAVSSAH-------------QVLWIKDREKDVAEARFVLYWAAKVILGSGLRILGLVPLERM 589
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYRM_XENLA (Probable arginyl-tRNA synthetase, mitochondrial OS=Xenopus laevis GN=rars2 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.209e-27 Identity = 79/229 (34.50%), Postives = 126/229 (55.02%), Query Frame = 2 Query: 2 KCGHVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEG--IELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVALMGLYESARIVLANGMKLLGLTPVERM 682 +C HV FG+V Q M TR+G V+ L D LD+ + M M +E KQ+ DP TA+ +GI+A++VQDF G++ + Y+FD ++ GDTG +LQY HARL S++ D+E DF + + +E I ++ L ++ +V L+ +P ++TYL + + + +T+ V S E A + +++ ++VL NGMKLLG+TPV M Sbjct: 373 RCQHVPFGLV-----QGMKTRRGEVVFLEDVLDEARSRMLQNMAASETS-KQLDDPSDTAEKIGIAALIVQDFKGQLVSDYHFDWDQALQSTGDTGVFLQYTHARLHSLQALRCPRDTE----DFEIASLREPCVIATLQHLLRYDEVIYKCLEDLQPRYLVTYLLSLGHLANVAH----------RTLQVK-GSSSEAAHARLLFFKNVQMVLGNGMKLLGITPVNNM 580
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYRM_MOUSE (Probable arginyl-tRNA synthetase, mitochondrial OS=Mus musculus GN=Rars2 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.376e-27 Identity = 77/230 (33.48%), Postives = 129/230 (56.09%), Query Frame = 2 Query: 2 KCGHVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRK---SELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVALMGLYESARIVLANGMKLLGLTPVERM 682 +C HV FG+VK M TR+G V L D L++V + M M + KQ+++P+ TA+ +G++A+++QDF G + + Y F +R+ GDTG +LQY HARLCS++ L+DS +A + + + +++ L ++ +V + + +P +++YL +S + + KT+ V P+ A + L+++ R VLANGMKLLG+TPV RM Sbjct: 371 RCQHVPFGIVKG-----MKTRRGGVTFLEDVLNEVQSRMLQNMASIKTT-KQLENPQETAERVGLAAVIIQDFRGTLLSDYQFSWDRVFQSRGDTGVFLQYTHARLCSLEETFGCGYLNDSNVA-----CLQEPQSVSILQHLLRFDEVLYLSSQDLQPKHIVSYLLTLSHLAAVAH----------KTLQVK-DSPPDVAGARLHLFKAVRSVLANGMKLLGITPVCRM 578
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_ENCCU (Arginyl-tRNA synthetase OS=Encephalitozoon cuniculi GN=ECU08_0550 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.775e-25 Identity = 77/229 (33.62%), Postives = 119/229 (51.97%), Query Frame = 2 Query: 2 KCGHVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYK-QVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRK-SELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVALMGLYESARIVLANGMKLLGLTPVERM 682 K HVS+G+V MSTR G V L D + + M +VM + +K + + TA++L IS ++V DF+ + GY FD+E+ TG YLQYAH RL S++ K S +D +++ DF LI + + LV L + V L+ EP ++TYL ++ ++ N + V+ D + L+ L SARIVL NG+++LG TP+ +M Sbjct: 351 KFQHVSYGLVAG-----MSTRAGKVQLLEDIIQESTEVMKNVMMSDNNKGSFTAAEMDQTAEVLAISTLLVMDFTARRVKGYEFDIEKRARNTSGTGLYLQYAHCRLRSIETKNSNVDYNDIETIDFELIHVPKVLNLVYKLLWFEHVVEKCLEDYEPSRIVTYLQDLASSI----------NGAINILRVLGVDKELARARLLVL-SSARIVLHNGLRILGATPLNKM 563
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYRM_BOVIN (Probable arginyl-tRNA synthetase, mitochondrial OS=Bos taurus GN=RARS2 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.355e-24 Identity = 71/227 (31.28%), Postives = 121/227 (53.30%), Query Frame = 2 Query: 2 KCGHVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVALMGLYESARIVLANGMKLLGLTPVERM 682 +C HV FG+V Q M TR+G V L D L+++ M M + K++++PE TA+ +G++A+++QDF G + + Y F +R+ GDTG +LQY HARL S+ + L + + + + + + +++ L ++ +V + + +P +++YL +S + + N PE A + L+ + R VLANGMKLLG+TPV RM Sbjct: 371 RCQHVPFGVV-----QGMKTRRGDVTFLEDVLNEIRLRMLQNMASIKTT-KELENPEETAEQVGLAALIIQDFRGFLLSDYQFSWDRVFQSRGDTGVFLQYTHARLHSL--EETFGCGYLNDFNTACLQEPQSVSILQHLLRFDEVLYRSSQDLQPRHIVSYLLTLSHLAAVAHRTLHVRN-----------SPPEVAGARLHLFRAVRSVLANGMKLLGITPVCRM 578
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_HALOH (Arginyl-tRNA synthetase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=argS PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.688e-24 Identity = 70/226 (30.97%), Postives = 113/226 (50.00%), Query Frame = 2 Query: 5 CGHVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVALMGLYESARIVLANGMKLLGLTPVERM 682 C HV FGMV G TMSTRKG V+ L D L+ + + EDK +++ E A I+GI A++ Q+ Y F +R SFEG+TGPY+QY + R S+ KS +L D+SL+T ++ +++ ++Q+PD + EP + ++ +++KA + Y + D + + A + L + VL G+ LLG+ E+M Sbjct: 358 CIHVPFGMVSLEDG-TMSTRKGRVVFLEDVLNKA---IEKTKETIEDKNPDLENKEEVAKIVGIGAVIFQELYNSRIKDYVFSWDRTLSFEGETGPYVQYTYVRTKSVLNKSNYKFKKL--DDYSLLTDEDAFNVIKLISQFPDTIIKASERYEPSIITRHITELAKAFNKYYHDNQ-----------ILVDDQKVREARLFLVYAVNTVLKTGLSLLGIKTPEKM 566
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_CLOBM (Arginyl-tRNA synthetase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=argS PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.429e-24 Identity = 73/227 (32.16%), Postives = 119/227 (52.42%), Query Frame = 2 Query: 5 CGHVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSEL-ANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVALMGLYESARIVLANGMKLLGLTPVERM 682 C HV FG+VK + +STR G V+ L D L+ + + +K +K ++D E TA LGI A++ FD + + SF+G+TGPY++Y++AR S+ RK+ EL AD+S +++KE EL + L + D N + EP V Y+ +++KA + Y+A ++ A+ + K+A + L E+ V+ N + LLG+ VE M Sbjct: 355 CKHVGFGLVK-LANKKLSTRNGDVVFLEDLLNQS---VEETLKIINEKNPNLKDKEGTAKKLGIGAVVFTYLKNNRERDIVFDWKEILSFDGETGPYVEYSYARGKSILRKA----GELTGEADYSKLSSKEEFELAKLLGGFNDAIMNAIDKLEPAMVTRYVIEVAKAFNKFYNAH----------GILNAEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563 The following BLAST results are available for this feature:
BLAST of FC910047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC910047 ID=FC910047; Name=FC910047; organism=Citrus clementina; type=EST; length=882bpback to top |