FC910650

Overview
NameFC910650
Unique NameFC910650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length624
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2817 contig Ccv1_Contig2817:13..636. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC910650 vs. ExPASy Swiss-Prot
Match: DET1_YEAST (Putative phosphoglycerate mutase DET1 OS=Saccharomyces cerevisiae GN=DET1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.908e-13
Identity = 34/60 (56.67%), Postives = 47/60 (78.33%), Query Frame = 1 
Query:  436 VREECRIREQDFGNFQVSERMKVIKETREKFGRFYYRFPEGESAADVFDRVSNFLESLWR 615
            V++E RIREQDFGNFQ    M+ + + R  +G F++RFP GESAADV+DRV++F E+L+R
Sbjct:  196 VKDEPRIREQDFGNFQKINSMQDVMKKRSTYGHFFFRFPHGESAADVYDRVASFQETLFR 255
The following BLAST results are available for this feature:
BLAST of FC910650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DET1_YEAST1.908e-1356.67Putative phosphoglycerate mutase DET1 OS=Saccharom... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA10AG06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA10AG06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910650 ID=FC910650; Name=FC910650; organism=Citrus clementina; type=EST; length=624bp
CAATTACAGAACTTTTAAAATTAATTTACAAAACTAACTGCAAAGCAAAG
CGGATTCGTTCCTACTAATCAAACAAAATCAAGTGAAAAATAACAATAAG
CAAGCGTCGTAATTTTCTCGACAATGTTGCAAAACAACCACCAGCGCTGC
CACAGCCACCAGAGGCACCTGCTGCCGAATCGGATCATCCTGGTCCGACA
CGGCGAGTCGGAGGGGAACCTCAACACCGGCGCCTACGCCACCACGCCCG
ATAACAAGATCCCCCTGACGCCCGGCGGAATCCACCAGGGTCGCTCTTGC
GGGGCCCGCCTCCGCTCATTGCTCTCCGGCTCCGCCAATGACTACCGCGT
CTACTTCTACGTGTCGCCGTACGAGCGCACGCGGTCGACGCTCCGCGAGA
TCGGACGCTCGTTCTCCAGGAAGCGTATAATTGGCGTCAGAGAAGAGTGC
AGGATTCGCGAACAGGATTTCGGTAACTTTCAGGTGAGTGAGAGGATGAA
AGTAATAAAGGAAACAAGGGAGAAGTTTGGGAGATTTTATTATAGATTTC
CTGAAGGGGAGTCGGCAGCTGATGTTTTTGACCGTGTTTCAAATTTTCTA
GAATCCCTGTGGAGGGACATAGAC
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