FC916141

Overview
NameFC916141
Unique NameFC916141
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length917
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig8440 contig Ccv1_Contig8440:1..917. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of FC916141 vs. ExPASy Swiss-Prot
Match: AXE1_TRIRE (Acetylxylan esterase OS=Trichoderma reesei GN=axe1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.165e-13
Identity = 47/148 (31.76%), Postives = 69/148 (46.62%), Query Frame = 1
Query:  310 GGDYCKQIGEGVRNGLSQITAFNKKCPCTHLILNGFSQGAWIMGDVLAGPG--GCSQITTGLDPTSAPGNAIAAALLWGDVKHEKNMPYNVGDGSDLQKNGRDATSLARLNRYAPVLRSYCSKGDPICAGGDDVDKHLTLFEKYTEDA 747
            G  Y   +  G     + I  F+  CP T L+L G+SQGA I  + L G G  G     T +  T+   +A+ AA+  GD ++   +PYNVG        G DA     +   A  ++SYC   DP C  G+D + H    ++Y + A
Sbjct:   85 GISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDPRNIHGLPYNVG---TCTTQGFDARPAGFVCPSASKIKSYCDAADPYCCTGNDPNVHQGYGQEYGQQA 229          
BLAST of FC916141 vs. ExPASy Swiss-Prot
Match: AXE2_PENPU (Acetylxylan esterase 2 OS=Penicillium purpurogenum GN=axe-2 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.075e-12
Identity = 46/160 (28.75%), Postives = 70/160 (43.75%), Query Frame = 1
Query:  310 GGDYCKQIGEGVRNGLSQITAFNKKCPCTHLILNGFSQGAWIMGDVLAGPGGCSQ--ITTGLDPTSAPGNAIAAALLWGDVKHEKNMPYNVG----DGSDLQKNGRDATSLARLNRYAPVLRSYCSKGDPICAGGDDVDKHLTLFEKYTEDASNWTVGKI 771
            G  Y   + +G+    S + +FN +CP T ++L G+SQG  IM   L G G  +Q    T +  +S+  N + AA+  GD      + Y VG     G D +  G    S A+       ++SYC   DP C  G +   H     +Y   A  +   K+
Sbjct:   81 GASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPMFRAGLSYEVGTCAAGGFDQRPAGFSCPSAAK-------IKSYCDASDPYCCNGSNAATHQGYGSEYGSQALAFVKSKL 233          
The following BLAST results are available for this feature:
BLAST of FC916141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
AXE1_TRIRE2.165e-1331.76Acetylxylan esterase OS=Trichoderma reesei GN=axe1... [more]
AXE2_PENPU1.075e-1228.75Acetylxylan esterase 2 OS=Penicillium purpurogenum... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA99CB08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA99CB08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC916141 ID=FC916141; Name=FC916141; organism=Citrus clementina; type=EST; length=917bp
TCGCAACCTAACCAGTACACTCGTTTTTTGACGACCGATTAATACCACAC
TCTTTAATATTTAATAATGTCTTCCATCATCCGCAACCTCCTCGCGCTCA
GCGCTGTCGCCGCTGTCGCCGTCGCTCAAGACCCAGCCTCGCCACCTCCC
AAGCTCGACGCTCCCTGCGCCGATGCCGTCATCTTCATGGCCCGCGGTAA
CACTGCGCCGTACCACGACTGGCGTACATTCCCCTACGCCGACGCTACGT
GCGCCAAACTAAGGGCTGAGGGCAAGACCTGCGACTACATTGAGATTGTA
TTCCCGTACGGCGGCGACTACTGCAAACAGATTGGCGAGGGAGTCCGCAA
CGGTCTATCCCAGATCACTGCTTTCAACAAGAAGTGCCCTTGCACGCACC
TCATCCTCAATGGCTTCTCTCAGGGTGCCTGGATTATGGGTGATGTCCTT
GCTGGACCTGGTGGATGCTCCCAGATCACCACTGGTCTAGACCCTACCTC
GGCTCCTGGTAATGCTATTGCTGCTGCTCTCCTCTGGGGCGATGTCAAGC
ACGAGAAGAACATGCCATACAACGTTGGCGACGGCTCTGATCTACAGAAG
AACGGTCGCGACGCCACCTCTCTTGCGCGCCTGAACCGCTACGCACCCGT
TCTGCGCTCTTACTGCTCTAAGGGAGACCCAATCTGCGCCGGCGGCGACG
ACGTCGACAAGCACTTGACCCTCTTTGAGAAGTACACCGAGGACGCCTCG
AACTGGACCGTTGGAAAGATCAATGCCGCCGCCCCTCTATGTGCCGCTCC
CACACCTACGCCCAGCGCTTCTTCTTCTGCCGTCGCCTCGTCTGTTCGCG
TTTGCGGTGTTGCATCTTCAAGCGCTGCTGTTTCCTCCAGTGTTGCTGCT
TCCTCTAGCGCTGCTGC
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