FC916149
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC916149 vs. ExPASy Swiss-Prot
Match: PSNA_ARATH (Presenilin-like protein At1g08700 OS=Arabidopsis thaliana GN=At1g08700 PE=2 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 3.395e-77 Identity = 155/249 (62.25%), Postives = 178/249 (71.49%), Query Frame = 3 Query: 144 MESSILDSIGSEIIGVMTPXXXXXXXXXXXXXXXXXXEQSLSGASDP-FRTAANLVYLERPDDSSTQKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTKLPEWTTWXXXXXXXXXXXXXXXXPGEPLKLLVELASSRDEELPALVYEARPTVS--DNERNRRSGLRFL 881 MESSILDS+G EIIGVM P SLS SDP R+AANL+Y+E P DS+T KLEG++ NA+VFV+LIA VTF+LVLL+YYNFTNFLK+Y+RFSAFFVLGTMGG PVD+ TCF+LLFNFTI+G LS+F+GGIPI+LRQ YMV MGI++AAWFTKLPEWTTW PG PLKLLVELASSRDEELPA+VYEARPTVS + RNR S LR L Sbjct: 1 MESSILDSLGVEIIGVMAPVSICMFLVVLLTY-------SLSVTSDPQIRSAANLIYIENPSDSTTVKLEGSLANAIVFVVLIAAVTFILVLLFYYNFTNFLKHYMRFSAFFVLGTMGGAIFLSIIQHFSIPVDSITCFILLFNFTILGTLSVFAGGIPIVLRQCYMVVMGIVVAAWFTKLPEWTTWFILVALALYDLVAVLAPGGPLKLLVELASSRDEELPAMVYEARPTVSSGNQRRNRGSSLRAL 242
BLAST of FC916149 vs. ExPASy Swiss-Prot
Match: PSNB_ARATH (Presenilin-like protein At2g29900 OS=Arabidopsis thaliana GN=At2g29900 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.178e-45 Identity = 99/235 (42.13%), Postives = 134/235 (57.02%), Query Frame = 3 Query: 153 SILDSIGSEIIGVMTPXXXXXXXXXXXXXXXXXXEQSLSGASDPFRTAANLVYLERPDDSSTQKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTKLPEWTTWXXXXXXXXXXXXXXXXPGEPLKLLVELASSRDEELPALVYEARPTVSDNERN 857 SILDS+G E+I ++TP S S + TAA Y E DSS K GA+LN++VFV I + TF+LVLL+Y FLK Y+ FSAF VLG +GG P+D+ T +LLFNF++VGV ++F IL+ Q Y+V +G+++A +FT LPEWTTW P PL+LLVE+A SRDE++PALVYEARP + ++ R+ Sbjct: 9 SILDSLGEELIAILTPVSICMFTVVLLVCILNSDPSSSSASFSSIATAA---YSESDSDSSWDKFVGALLNSVVFVAAITVATFVLVLLFYLRCVKFLKFYMGFSAFIVLGNLGGEILVLLIDRFRFPIDSITFLILLFNFSVVGVFAVFMSKFSILITQGYLVWIGVLVAYFFTLLPEWTTWVLLVALALYDIAAVLLPVGPLRLLVEMAISRDEDIPALVYEARPVIRNDSRS 240
BLAST of FC916149 vs. ExPASy Swiss-Prot
Match: PSNA_DICDI (Presenilin-A OS=Dictyostelium discoideum GN=psenA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.237e-20 Identity = 47/158 (29.75%), Postives = 89/158 (56.33%), Query Frame = 3 Query: 354 AVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTKLPEWTTWXXXXXXXXXXXXXXXXPGEPLKLLVELASSRDEELPALVYEA 827 +V+N+L+F+ +I + T ++V+LY + L ++ ++ +LG GG +D T ++++NF++ G++ +F P LL Q Y++ + ++MA +F++LP+WTTW PG PL++L+E A R+E +PA++Y A Sbjct: 227 SVVNSLIFLAVIILSTTIMVVLYKFKLMKALYAWLMGTSILLLGVFGGFLFLILLAYLNLGLDYVTFVIVVWNFSVGGIVCIFWYS-PKLLNQGYLISISVLMALFFSRLPDWTTWGILSIVSIYDIFAVLCPGGPLRILIETAQKRNENIPAMIYNA 383
BLAST of FC916149 vs. ExPASy Swiss-Prot
Match: PSN1_XENLA (Presenilin-1 OS=Xenopus laevis GN=psen1 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.664e-18 Identity = 58/184 (31.52%), Postives = 94/184 (51.09%), Query Frame = 3 Query: 288 RTAANLVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGEPLKLLVELASSRDEEL-PALVYEA 827 R L+Y +D+ + Q+ ++LNA + + +I ++T LLV+LY Y + ++ S+ +L VD T +L++NF +VG++ + G P+LL+QAY++ + +MA F K LPEWTTW P PL++LVE A R+E L PAL+Y + Sbjct: 74 RFDGQLIYTPFTEDTESVGQRALNSILNATIMISVIIVMTILLVVLYKYRCYKVIHGWLIISSLLLLFFFSYIYLGEVFKTYNVAVDYITLALLIWNFGVVGMICIHWKG-PLLLQQAYLIMISALMALVFIKYLPEWTTWLILAVISVYDLVAVLSPKGPLRMLVETAQERNETLFPALIYSS 256
BLAST of FC916149 vs. ExPASy Swiss-Prot
Match: PSN1_MICMU (Presenilin-1 OS=Microcebus murinus GN=PSEN1 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.039e-17 Identity = 59/184 (32.07%), Postives = 93/184 (50.54%), Query Frame = 3 Query: 288 RTAANLVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGEPLKLLVELASSRDEEL-PALVYEA 827 R L+Y +D+ T Q+ +VLNA + + +I ++T LLV+LY Y + ++ S+ +L VD T +L++NF +VG++S+ G P+ L+QAY++ + +MA F K LPEWT W P PL++LVE A R+E L PAL+Y + Sbjct: 108 RKDGQLIYTPFTEDTETVGQRALHSVLNAAIMISVIVVMTILLVVLYKYRCYKVIHAWLIISSLLLLFFFSFIYLGEVFKTYNVAVDYITVALLIWNFGVVGMISIHWKG-PLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNETLFPALIYSS 290
BLAST of FC916149 vs. ExPASy Swiss-Prot
Match: PSN1_PONAB (Presenilin-1 OS=Pongo abelii GN=PSEN1 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.357e-17 Identity = 58/184 (31.52%), Postives = 93/184 (50.54%), Query Frame = 3 Query: 288 RTAANLVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGEPLKLLVELASSRDEEL-PALVYEA 827 R L+Y +D+ T Q+ ++LNA + + +I ++T LLV+LY Y + ++ S+ +L VD T +L++NF +VG++S+ G P+ L+QAY++ + +MA F K LPEWT W P PL++LVE A R+E L PAL+Y + Sbjct: 108 RKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVVMTILLVVLYKYRCYKVIHAWLIISSLLLLFFFSFIYLGEVFKTYNVAVDYITVALLIWNFGVVGMISIHWKG-PLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNETLFPALIYSS 290
BLAST of FC916149 vs. ExPASy Swiss-Prot
Match: PSN1_MACFA (Presenilin-1 OS=Macaca fascicularis GN=PSEN1 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.357e-17 Identity = 58/184 (31.52%), Postives = 93/184 (50.54%), Query Frame = 3 Query: 288 RTAANLVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGEPLKLLVELASSRDEEL-PALVYEA 827 R L+Y +D+ T Q+ ++LNA + + +I ++T LLV+LY Y + ++ S+ +L VD T +L++NF +VG++S+ G P+ L+QAY++ + +MA F K LPEWT W P PL++LVE A R+E L PAL+Y + Sbjct: 108 RKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVVMTILLVVLYKYRCYKVIHAWLIISSLLLLFFFSFKNLGEVFKTYNVAVDYITVALLIWNFGVVGMISIHWKG-PLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNETLFPALIYSS 290
BLAST of FC916149 vs. ExPASy Swiss-Prot
Match: PSN1_HUMAN (Presenilin-1 OS=Homo sapiens GN=PSEN1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.357e-17 Identity = 58/184 (31.52%), Postives = 93/184 (50.54%), Query Frame = 3 Query: 288 RTAANLVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGEPLKLLVELASSRDEEL-PALVYEA 827 R L+Y +D+ T Q+ ++LNA + + +I ++T LLV+LY Y + ++ S+ +L VD T +L++NF +VG++S+ G P+ L+QAY++ + +MA F K LPEWT W P PL++LVE A R+E L PAL+Y + Sbjct: 108 RKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVVMTILLVVLYKYRCYKVIHAWLIISSLLLLFFFSFIYLGEVFKTYNVAVDYITVALLIWNFGVVGMISIHWKG-PLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNETLFPALIYSS 290
BLAST of FC916149 vs. ExPASy Swiss-Prot
Match: PSN1_MOUSE (Presenilin-1 OS=Mus musculus GN=Psen1 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.023e-17 Identity = 58/184 (31.52%), Postives = 93/184 (50.54%), Query Frame = 3 Query: 288 RTAANLVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGEPLKLLVELASSRDEEL-PALVYEA 827 R L+Y +D+ T Q+ ++LNA + + +I I+T LLV+LY Y + ++ S+ +L VD T +L++NF +VG++++ G P+ L+QAY++ + +MA F K LPEWT W P PL++LVE A R+E L PAL+Y + Sbjct: 108 RKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVIMTILLVVLYKYRCYKVIHAWLIISSLLLLFFFSFIYLGEVFKTYNVAVDYVTVALLIWNFGVVGMIAIHWKG-PLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNETLFPALIYSS 290
BLAST of FC916149 vs. ExPASy Swiss-Prot
Match: PSN1_RAT (Presenilin-1 OS=Rattus norvegicus GN=Psen1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.948e-17 Identity = 57/184 (30.98%), Postives = 93/184 (50.54%), Query Frame = 3 Query: 288 RTAANLVYLERPDDSST--QKLEGAVLNALVFVILIAIVTFLLVLLYYYNFTNFLKNYVRFSAFFVLGTMGGXXXXXXXXXXXXPVDAFTCFVLLFNFTIVGVLSLFSGGIPILLRQAYMVCMGIIMAAWFTK-LPEWTTWXXXXXXXXXXXXXXXXPGEPLKLLVELASSRDEEL-PALVYEA 827 R L+Y +D+ T Q+ ++LNA + + +I ++T LLV+LY Y + ++ S+ +L VD T +L++NF +VG++++ G P+ L+QAY++ + +MA F K LPEWT W P PL++LVE A R+E L PAL+Y + Sbjct: 108 RKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVVMTILLVVLYKYRCYKVIHAWLIVSSLLLLFFFSFIYLGEVFKTYNVAVDYITVALLIWNFGVVGMIAIHWKG-PLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLVAVLCPKGPLRMLVETAQERNETLFPALIYSS 290 The following BLAST results are available for this feature:
BLAST of FC916149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC916149 ID=FC916149; Name=FC916149; organism=Citrus clementina; type=EST; length=882bpback to top |