FC917085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC917085 vs. ExPASy Swiss-Prot
Match: LCYE_ARATH (Lycopene epsilon cyclase, chloroplastic OS=Arabidopsis thaliana GN=LUT2 PE=1 SV=2) HSP 1 Score: 322.013 bits (824), Expect = 2.943e-87 Identity = 165/235 (70.21%), Postives = 193/235 (82.13%), Query Frame = 3 Query: 225 CLGARNFAAMAVSPFPTGRTRRKALRVRTKQSAVDCNHSSYKVTARATSSNAGSESCVAVKE-----EDYIKAGGSQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRKCVESGVSYLSSKVESITESTSGHRLVPCEHDMIV 914 C+GARNFAAMAVS FP+ RRK V+ + S + V A S+ GSESCVAV+E ED++KAGGS+++FVQMQQNK MD+QSKL DKLPPISIG+G LDLVVIGCGPAGLALAAESAKLGL VGLIGPDLPFTNNYGVWEDEF DLGL+ CIEHVWR+T+VY+D+D+PI IGRAYGRVSR LLHEELLR+CVESGVSYLSSKV+SITE++ G RLV C+ + ++ Sbjct: 3 CVGARNFAAMAVSTFPSWSCRRKFPVVK-RYSYRNIRFGLCSVRASGGGSS-GSESCVAVREDFADEEDFVKAGGSEILFVQMQQNKDMDEQSKLVDKLPPISIGDGALDLVVIGCGPAGLALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFNDLGLQKCIEHVWRETIVYLDDDKPITIGRAYGRVSRRLLHEELLRRCVESGVSYLSSKVDSITEASDGLRLVACDDNNVI 235
BLAST of FC917085 vs. ExPASy Swiss-Prot
Match: LCYE_SOLLC (Lycopene epsilon cyclase, chloroplastic OS=Solanum lycopersicum GN=CRTL-E-1 PE=2 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 3.485e-80 Identity = 151/235 (64.26%), Postives = 184/235 (78.30%), Query Frame = 3 Query: 225 CLGARNFAAMAVSPFPTGRTRRKALRVRTKQSAVDCNHSSYKVTARATSSNAGSESCVAVKE-----EDYIKAGGSQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRKCVESGVSYLSSKVESITESTSGHRLVPCEHDMIV 914 C+G +N AMAV P R R + ++ ++ + Y+ +S++GS+SCV KE EDYIKAGGSQLVFVQMQQ K MD+QSKL+D+L IS G +LDLVVIGCGPAGLALAAESAKLGLNVGL+GPDLPFTNNYGVWEDEF+DLGL+ CIEHVWRDT+VY+D+DEPILIGRAYGRVSRH LHEELL++CVE+GV YL+SKV+ I E+T+G LV CE D+++ Sbjct: 3 CVGVQNVGAMAVLTRP--RLNRWSGGELCQEKSIFLAYEQYESKC---NSSSGSDSCVVDKEDFADEEDYIKAGGSQLVFVQMQQKKDMDQQSKLSDELRQISAGQTVLDLVVIGCGPAGLALAAESAKLGLNVGLVGPDLPFTNNYGVWEDEFKDLGLQACIEHVWRDTIVYLDDDEPILIGRAYGRVSRHFLHEELLKRCVEAGVLYLNSKVDRIVEATNGQSLVECEGDVVI 232
BLAST of FC917085 vs. ExPASy Swiss-Prot
Match: NXS_SOLTU (Neoxanthin synthase, chloroplastic OS=Solanum tuberosum GN=NXS PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.806e-21 Identity = 57/141 (40.43%), Postives = 79/141 (56.03%), Query Frame = 3 Query: 435 SQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPD--LPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRKCVESGVSYLSSKV 851 S L + + +S D L D + G D+++IG GPAGL LA +K G+ V + P + NNYGVW DEF +LGLE C++H W T V+I++ + +GR YGRVSR L LL CVE+ V + +KV Sbjct: 53 SFLDLAPISKPESFDVNISLVDP----NSGRAQFDVIIIGAGPAGLRLAEHVSKYGIKVCCVDPSPLSMWPNNYGVWVDEFENLGLEDCLDHKWPMTCVHINDHKTKYLGRPYGRVSRKKLKLRLLNSCVENRVKFYKAKV 189
BLAST of FC917085 vs. ExPASy Swiss-Prot
Match: LCYB_ARATH (Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana GN=LCY1 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.819e-20 Identity = 57/167 (34.13%), Postives = 95/167 (56.89%), Query Frame = 3 Query: 399 AVKEEDYIKAGGSQLV-FVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPD--LPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRKCVESGVSYLSSKVESITESTSGHRLV 890 A+K + +G + L+ V + +++D + L D + + ++DL ++G GPAGLA+A + ++ GL+V I P L + NNYGVW DEF + L C++ W VVY+DE + R YGRV+R L ++L+KC+ +GV + SKV ++ + +V Sbjct: 42 AIKIVSSVVSGSAALLDLVPETKKENLDFELPLYD-----TSKSQVVDLAIVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYVDEGVKKDLSRPYGRVNRKQLKSKMLQKCITNGVKFHQSKVTNVVHEEANSTVV 203
BLAST of FC917085 vs. ExPASy Swiss-Prot
Match: LCYB_TOBAC (Lycopene beta cyclase, chloroplastic OS=Nicotiana tabacum GN=LCY1 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.103e-20 Identity = 54/140 (38.57%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 480 KQSKLADKLPPISIGNG-ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPD--LPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRKCVESGVSYLSSKVESITESTSGHRLV 890 K+ L +LP G ++DL V+G GPAGLA+A + ++ GL+V I P L + NNYGVW DEF + L C++ W TVVYID++ + R YGRV+R L ++++KC+ +GV + +KV + + L+ Sbjct: 65 KKENLDFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVVSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDATWSGTVVYIDDNTTKDLDRPYGRVNRKQLKSKMMQKCILNGVKFHHAKVIKVIHEEAKSMLI 204
BLAST of FC917085 vs. ExPASy Swiss-Prot
Match: LCYB_SOLLC (Lycopene beta cyclase, chloroplastic OS=Solanum lycopersicum GN=LCY1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 9.028e-20 Identity = 53/140 (37.86%), Postives = 82/140 (58.57%), Query Frame = 3 Query: 480 KQSKLADKLPPISIGNGIL-DLVVIGCGPAGLALAAESAKLGLNVGLIGPD--LPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRKCVESGVSYLSSKVESITESTSGHRLV 890 K+ L +LP G++ DL V+G GPAGLA+A + ++ GL+V I P+ L + NNYGVW DEF + L C++ W VYID++ + R YGRV+R L ++++KC+ +GV + +KV + S L+ Sbjct: 65 KKENLDFELPMYDPSKGVVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPNPKLIWPNNYGVWVDEFEAMDLLDCLDATWSGAAVYIDDNTAKDLHRPYGRVNRKQLKSKMMQKCIMNGVKFHQAKVIKVIHEESKSMLI 204
BLAST of FC917085 vs. ExPASy Swiss-Prot
Match: LCYB_CAPAN (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Capsicum annuum GN=LCY1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 9.028e-20 Identity = 57/161 (35.40%), Postives = 90/161 (55.90%), Query Frame = 3 Query: 432 GSQLVFVQMQQNKSMD-----KQSKLADKLPPISIGNGIL-DLVVIGCGPAGLALAAESAKLGLNVGLIGPD--LPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRKCVESGVSYLSSKVESITESTSGHRLV 890 GS+ V V+ + ++ K+ L +LP G++ DL V+G GPAGLA+A + ++ GL+V I P+ L + NNYGVW DEF + L C++ W VYID+ + R YGRV+R L ++++KC+ +GV + +KV + S L+ Sbjct: 42 GSRSVCVKASSSALLELVPETKKENLDFELPMYDPSKGVVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPNPKLIWPNNYGVWVDEFEAMDLLDCLDATWSGAAVYIDDKTTKDLNRPYGRVNRKQLKSKMMQKCILNGVKFHQAKVIKVIHEESKSMLI 202
BLAST of FC917085 vs. ExPASy Swiss-Prot
Match: CCS_CAPAN (Capsanthin/capsorubin synthase, chromoplast OS=Capsicum annuum GN=CCS PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.011e-19 Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 3 Query: 537 DLVVIGCGPAGLALAAESAKLGLNVGLIGPD--LPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRKCVESGVSYLSSKV 851 D+++IG GPAGL LA + +K G+ V + P + NNYGVW DEF LGLE C++H W + V+I + + + R YGRVSR L +LL CVE+ V + +KV Sbjct: 83 DVIIIGTGPAGLRLAEQVSKYGIKVCCVDPSPLSMWPNNYGVWVDEFEKLGLEDCLDHKWPVSCVHISDHKTKYLDRPYGRVSRKKLKLKLLNSCVENRVKFYKAKV 189
BLAST of FC917085 vs. ExPASy Swiss-Prot
Match: CCS_CITSI (Capsanthin/capsorubin synthase, chromoplast OS=Citrus sinensis GN=CCS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.793e-18 Identity = 47/108 (43.52%), Postives = 69/108 (63.89%), Query Frame = 3 Query: 537 DLVVIGCGPAGLALAAE-SAKLGLNVGLIGPDLPFT--NNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRKCVESGVSYLSSKV 851 D+++IG GPAGL LA + S++ + V + P T NNYGVW DEF D+GL C++ W T V+I++ + + R YGRVSR++L +LL CV +GV + +KV Sbjct: 87 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRPYGRVSRNILKTKLLENCVSNGVKFHKAKV 194
BLAST of FC917085 vs. ExPASy Swiss-Prot
Match: LCYB_NARPS (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=LCY1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.340e-14 Identity = 42/108 (38.89%), Postives = 63/108 (58.33%), Query Frame = 3 Query: 534 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD--LPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRKCVESGVSYLSSKV 851 LDL V+G GP + + S GL+V I P+ L + NNYGVW DEF D+ L C++ W +VY+D+ + R Y RV+R L ++++KCV +GV + + V Sbjct: 88 LDLAVVGGGPLARSCST-SLGGGLSVVSIDPNPKLIWPNNYGVWVDEFEDMDLLDCLDATWSGAIVYVDDRSTKNLSRPYARVNRKNLKSKMMKKCVSNGVRFHQATV 194 The following BLAST results are available for this feature:
BLAST of FC917085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC917085 ID=FC917085; Name=FC917085; organism=Citrus clementina; type=EST; length=916bpback to top |