FC918258
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC918258 vs. ExPASy Swiss-Prot
Match: HSFB4_ARATH (Heat stress transcription factor B-4 OS=Arabidopsis thaliana GN=HSFB4 PE=2 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 6.765e-76 Identity = 160/273 (58.61%), Postives = 177/273 (64.84%), Query Frame = 1 Query: 85 MALMLDNCEG---------ILLSLDSH-KSVPAPFLTKTYQLVDDPTTDHVVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAQPQVAINXXXXXXXXXXXXXXVLVNGPSFFPFPNRVSISPSDSDEHVNNWC-DSPPRGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEDNERLRRSNNMLMSELAHMRKLYNDIIYFVQNHVKPVTPSN--SYPPSLL 864 MA+M++N G I L ++ K+VPAPFLTKTYQLVDDP TDHVVSWG+DDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFK+GEKHLLCEIHRRKT+ Q+ + +G SFFP P +P E + WC DSPP + LSEDNERLRRSN +LMSELAHM+KLYNDIIYFVQNHVKPV PSN SY S L Sbjct: 1 MAMMVENSYGGYGGGGGERIQLMVEGQGKAVPAPFLTKTYQLVDDPATDHVVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKRGEKHLLCEIHRRKTS--QMIPQQHSPFMSHHHAPPQIPFSGGSFFPLPPPRVTTP----EEDHYWCDDSPPSRPR-------------------VIPQQIDTAAQVTALSEDNERLRRSNTVLMSELAHMKKLYNDIIYFVQNHVKPVAPSNNSSYLSSFL 248
BLAST of FC918258 vs. ExPASy Swiss-Prot
Match: HFB4B_ORYSJ (Heat stress transcription factor B-4b OS=Oryza sativa subsp. japonica GN=HSFB4B PE=2 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 9.791e-67 Identity = 140/282 (49.65%), Postives = 166/282 (58.87%), Query Frame = 1 Query: 85 MALMLDNCEGILLSLD----------SHKSVPAPFLTKTYQLVDDPTTDHVVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAQPQVAINXXXXXXXXXXXXXXVLVNGPSFFPFPNRVSISPSDSDEHVNNWCDSPPRGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEDNERLRRSNNMLMSELAHMRKLYNDIIYFVQNHVKPVTPSNSYPPSLLLCNTTPSAAAAA 900 MA +++ C +++S++ + K VPAPFLTKTYQLVDDP TDH+VSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIV DRWEFANEFF+KG KHLL EIHRRK++QP P P++ P H+N + PP LSEDN +LRR N++L+SELAHM+KLYNDIIYF+QNHV PVT + + P S + AAA Sbjct: 1 MAFLVERCGEMVVSMEMGPHGGGGAAAGKPVPAPFLTKTYQLVDDPCTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQPPPP-------------------------PMPHQ----PYHHHHHLNPFSLPPP--PPAYHHHHLIQEEPATTAHCTVAGDGGEGGDFLAALSEDNRQLRRRNSLLLSELAHMKKLYNDIIYFLQNHVAPVTTTTTTPSSTAMAAAQHHLPAAA 251
BLAST of FC918258 vs. ExPASy Swiss-Prot
Match: HFB4D_ORYSJ (Heat stress transcription factor B-4d OS=Oryza sativa subsp. japonica GN=HSFB4D PE=2 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 7.261e-62 Identity = 136/268 (50.75%), Postives = 163/268 (60.82%), Query Frame = 1 Query: 85 MALMLDNCEG-ILLSLD-SH----------KSVPAPFLTKTYQLVDDPTTDHVVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKT---AQPQVAINXXXXXXXXXXXXXXVLVNGPSFFPFPNRVSISPSDSDEHVNNWCDSPP--RGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEDNERLRRSNNMLMSELAHMRKLYNDIIYFVQNHVKPVTP 837 MA +++ C G +++S++ SH + PAPFL+KTYQLVDDP+TD VVSWGED+ TFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIV DRWEFANEFF+KG KHLL EIHRRK+ +QPQ + + P P V + + + +C SP GG LSEDN +LRR N++L+SELAHMRKLYNDIIYF+QNHV+PV P Sbjct: 1 MAFLVERCGGEMVVSMERSHGRSTTTAAAVTAAPAPFLSKTYQLVDDPSTDDVVSWGEDEATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLSEIHRRKSSSCSQPQ------PPPPFPMHQHYPLSLFSPPTTPRSPPVGAAAAAAYHFQEEYCSSPADYAGG---------------------------GGDLLAALSEDNRQLRRRNSLLLSELAHMRKLYNDIIYFLQNHVEPVAP 235
BLAST of FC918258 vs. ExPASy Swiss-Prot
Match: HFB4C_ORYSJ (Heat stress transcription factor B-4c OS=Oryza sativa subsp. japonica GN=HSFB4C PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 4.569e-48 Identity = 87/107 (81.31%), Postives = 97/107 (90.65%), Query Frame = 1 Query: 133 SHKSVPAPFLTKTYQLVDDPTTDHVVSWGEDD-TTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAQPQVA 450 + K+VPAPFLTKTYQLVDDP TDH+VSWG+D +TFVVWRPPEFARD+LPNYFKHNNFSSFVRQLNTYGFRK+VP+RWEFANEFF+KGEK LL EIHRRKT+ A Sbjct: 17 AQKAVPAPFLTKTYQLVDDPATDHIVSWGDDRVSTFVVWRPPEFARDILPNYFKHNNFSSFVRQLNTYGFRKVVPERWEFANEFFRKGEKQLLTEIHRRKTSSASTA 123 HSP 2 Score: 76.2554 bits (186), Expect = 2.798e-13 Identity = 35/43 (81.40%), Postives = 38/43 (88.37%), Query Frame = 1 Query: 712 LSEDNERLRRSNNMLMSELAHMRKLYNDIIYFVQNHVKPVTPS 840 L E+NERLRRSN L+ ELAHMRKLYNDIIYFVQNHV+PV PS Sbjct: 212 LMEENERLRRSNTALLQELAHMRKLYNDIIYFVQNHVRPVAPS 254
BLAST of FC918258 vs. ExPASy Swiss-Prot
Match: HFB2B_ORYSJ (Heat stress transcription factor B-2b OS=Oryza sativa subsp. japonica GN=HSFB2B PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.868e-47 Identity = 104/227 (45.81%), Postives = 122/227 (53.74%), Query Frame = 1 Query: 139 KSVPAPFLTKTYQLVDDPTTDHVVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAQPQVAINXXXXXXXXXXXXXXVLVNGPSFFPFPNRVSISPSDSDEHVNNWCDSPPRGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEDNERLRRSNNMLMSELAHMRKLYNDIIYFVQNH 819 ++VP PFLTKTYQLVDDP D V+SW +D +TFVVWRP EFARDLLP YFKHNNFSSFVRQLNTYGFRKIVPDRWEFAN+ F++GE+ LLCEIHRRK P A S IS S S E +P G + ++NERLRR N L EL+ MRKL N+I+ + + Sbjct: 43 RTVPTPFLTKTYQLVDDPAVDDVISWNDDGSTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANDCFRRGERRLLCEIHRRKVTPPAPAATTAAVAAAIPMALPVTTTRDGSPVLSGEEQVISSSSSPEPPLVLPQAPSGSGS--------------------------GGVASGDVGDENERLRRENAQLARELSQMRKLCNNILLLMSKY 243
BLAST of FC918258 vs. ExPASy Swiss-Prot
Match: HFB4A_ORYSJ (Putative heat stress transcription factor B-4a OS=Oryza sativa subsp. japonica GN=HSFB4A PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.470e-46 Identity = 85/102 (83.33%), Postives = 94/102 (92.16%), Query Frame = 1 Query: 145 VPAPFLTKTYQLVDDPTTDHVVSWGEDD-----TTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTA 435 VPAPFLTKTYQLVDDP TDHVVSW +DD ++FVVWRPPEFARD+LPNYFKH+NFSSFVRQLNTYGFRK+VP+RWEFANEFF+KGEK LLCEIHRRK+A Sbjct: 22 VPAPFLTKTYQLVDDPATDHVVSWEDDDGGESASSFVVWRPPEFARDILPNYFKHSNFSSFVRQLNTYGFRKVVPERWEFANEFFRKGEKQLLCEIHRRKSA 123
BLAST of FC918258 vs. ExPASy Swiss-Prot
Match: HFB2B_ARATH (Heat stress transcription factor B-2b OS=Arabidopsis thaliana GN=HSFB2B PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 3.621e-45 Identity = 102/229 (44.54%), Postives = 127/229 (55.46%), Query Frame = 1 Query: 130 DSHKSVPAPFLTKTYQLVDDPTTDHVVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAQPQVAINXXXXXXXXXXXXXXVLVNGPSFFPFPNRVSISPSDSDEHVNNWCDSPPRGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEDNERLRRSNNMLMSELAHMRKLYNDIIYFVQN 816 DS +S+P PFLTKTYQLV+DP D ++SW ED TTF+VWRP EFARDLLP YFKHNNFSSFVRQLNTYGFRK+VPDRWEF+N+ FK+GEK LL +I RRK +QP +A V + P + +SPS+S E +S P L E+NERLR+ N L E+ ++ LY +I + N Sbjct: 51 DSQRSIPTPFLTKTYQLVEDPVYDELISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNDCFKRGEKILLRDIQRRKISQPAMAAAAAAAAAAVAASAVTV-----AAVPVVAHI-VSPSNSGEEQVISSNSSPAAA----------AAAIGGVVGGGSLQRTTSCTTAPELVEENERLRKDNERLRKEMTKLKGLYANIYTLMAN 263
BLAST of FC918258 vs. ExPASy Swiss-Prot
Match: HFB2C_ORYSJ (Heat stress transcription factor B-2c OS=Oryza sativa subsp. japonica GN=HSFB2C PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 4.003e-44 Identity = 113/288 (39.24%), Postives = 139/288 (48.26%), Query Frame = 1 Query: 124 SLDSHKSVPAPFLTKTYQLVDDPTTDHVVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAQPQVAINXXXXXXXXXXXXXXVLVNGP---SFFPFPNRVSISPSDSDEHVNNWCDSPPRGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEDNERLRRSNNMLMSELAHMRKLYNDII-----YFVQNHV-----------------KPVTPSNSYPPSLL----LCNTTPSAAAAA 900 +L +S+P PFLTKTYQLV+DP D V+SW ED +TFVVWRP EFARDLLP YFKHNNFSSFVRQLNTYGFRKIVPDRWEFAN+ F++GEK LLC+IHRRK A + +G + P P + ++ + S H + G L +N RL R EL HM+KL N+I+ Y HV + V P PP++L C +AAAAA Sbjct: 28 ALAGQRSLPTPFLTKTYQLVEDPAVDDVISWNEDGSTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANDCFRRGEKRLLCDIHRRKVVAAAAA--APPPPSPGMATAAAAVASGAVTVAAAPIPMALPVTRAGSPAHSSEEQVLSSNSGSGEEHRQASGSGSAPGGGGGGSASGGDMGEENERLRRENARLTR-------ELGHMKKLCNNILLLMSKYAATQHVEGSAGISSIANCSGESSEAVPPPPPLPPAILDLMPSCPALATAAAAA 306
BLAST of FC918258 vs. ExPASy Swiss-Prot
Match: HSF24_SOLPE (Heat shock factor protein HSF24 OS=Solanum peruvianum GN=HSF24 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.288e-42 Identity = 100/231 (43.29%), Postives = 123/231 (53.25%), Query Frame = 1 Query: 133 SHKSVPAPFLTKTYQLVDDPTTDHVVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAQPQVAINXXXXXXXXXXXXXXVLVNGPSFFPFPNRVSISPSDSDEHVNNWCDSPPRGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEDNERLRRSNNMLMSELAHMRKLYNDIIYFVQNHVK 825 S ++ PAPFL KTYQLVDD TD V+SW E TTFVVW+ EFA+DLLP YFKHNNFSSFVRQLNTYGFRKIVPD+WEFANE FK+G+K LL I RRKT A G S S SP +S + + + S P LS++NE+L++ N ML SEL +K N+++ F+ +VK Sbjct: 2 SQRTAPAPFLLKTYQLVDDAATDDVISWNEIGTTFVVWKTAEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDKWEFANENFKRGQKELLTAIRRRKTVTSTPA-------------------GGKS---VAAGASASPDNSGDDIGSSSTSSP------------------DSKNPGSVDTPGKLSQFTDLSDENEKLKKDNQMLSSELVQAKKQCNELVAFLSQYVK 192
BLAST of FC918258 vs. ExPASy Swiss-Prot
Match: HSFB1_ARATH (Heat stress transcription factor B-1 OS=Arabidopsis thaliana GN=HSFB1 PE=2 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 6.391e-42 Identity = 96/231 (41.56%), Postives = 127/231 (54.98%), Query Frame = 1 Query: 133 SHKSVPAPFLTKTYQLVDDPTTDHVVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAQPQVAINXXXXXXXXXXXXXXVLVNGPSFFPFPNRVSISPSDSDEHVNNWCDSPPRGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEDNERLRRSNNMLMSELAHMRKLYNDIIYFVQNHVK 825 + +SVPAPFL+KTYQLVDD +TD VVSW E+ T FVVW+ EFA+DLLP YFKHNNFSSF+RQLNTYGFRK VPD+WEFAN++F++G + LL +I RRK+ A V+V PS + D+H ++ SP LS +NE+L+R NN L SELA +K ++++ F+ H+K Sbjct: 7 AQRSVPAPFLSKTYQLVDDHSTDDVVSWNEEGTAFVVWKTAEFAKDLLPQYFKHNNFSSFIRQLNTYGFRKTVPDKWEFANDYFRRGGEDLLTDIRRRKSVIASTA-------------GKCVVVGSPS--------ESNSGGGDDHGSSSTSSP-----------------------GSSKNPGSVENMVADLSGENEKLKRENNNLSSELAAAKKQRDELVTFLTGHLK 193 The following BLAST results are available for this feature:
BLAST of FC918258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >FC918258 ID=FC918258; Name=FC918258; organism=Citrus clementina; type=EST; length=910bpback to top |