FC919310

Overview
NameFC919310
Unique NameFC919310
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length505
Libraries
Library NameType
PCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig865 contig Ccv1_Contig865:163..667. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC919310 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 3.478e-61
Identity = 110/159 (69.18%), Postives = 121/159 (76.10%), Query Frame = 1
Query:    1 DACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRAPEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGCL 477
            DACENWGFFELVNHGI PE MDTVER+TKAHY+KCMEQRFKELVAS+A EGIQ EV DMDWEST+++RHLPQS I+EVPDLDEEYR+VM                          GYLKK F+G  GP FGTKV+NYPPCPK DLIKGLRAHTDAGG +
Sbjct:   26 DACENWGFFELVNHGIPPELMDTVERVTKAHYKKCMEQRFKELVASKALEGIQAEVTDMDWESTYFLRHLPQSNISEVPDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGII 184          
BLAST of FC919310 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 2.493e-59
Identity = 105/159 (66.04%), Postives = 121/159 (76.10%), Query Frame = 1
Query:    1 DACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRAPEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGCL 477
            DACENWGFFELV+HGI  EF+DTVERLTK HYR+C+EQRFKELVAS+  E ++TEVNDMDWESTFY+RHLP+S I+EVPDL+++YR VM                          GYLKK F+G NGPTFGTKVSNYPPCP P+LIKGLRAHTDAGG +
Sbjct:   26 DACENWGFFELVSHGIPTEFLDTVERLTKEHYRQCLEQRFKELVASKGLEAVKTEVNDMDWESTFYLRHLPKSNISEVPDLEDQYRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLI 184          
BLAST of FC919310 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 5.553e-59
Identity = 106/159 (66.67%), Postives = 119/159 (74.84%), Query Frame = 1
Query:    1 DACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRAPEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGCL 477
            DACENWGFFELVNHGI  E MDTVE++TK HY+KCMEQRFKELVAS+A EG+Q EV DMDWESTF+++HLP S I+EVPDLDEEYR+VM                          GYLK  F+G+ GP FGTKVSNYPPCPKPDLIKGLRAHTDAGG +
Sbjct:   26 DACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGII 184          
BLAST of FC919310 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 2.110e-58
Identity = 105/159 (66.04%), Postives = 118/159 (74.21%), Query Frame = 1
Query:    1 DACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRAPEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGCL 477
            DACENWGFFELVNHGI  E MDTVE+LTK HY+KCMEQRFKELVAS+  E +Q EV D+DWESTF++RHLP S I+EVPDLD+EYR+VM                          GYLKK F+G+ GP FGTKVSNYPPCPKPDLIKGLRAHTDAGG +
Sbjct:   26 DACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPVSNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGII 184          
BLAST of FC919310 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 6.140e-58
Identity = 104/159 (65.41%), Postives = 117/159 (73.58%), Query Frame = 1
Query:    1 DACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRAPEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGCL 477
            DACENWGFFELVNHGI  E MDTVE+LTK HY+KCMEQRFKELVAS+  E +Q EV D+DWESTF++RHLP S I++VPDLDEEYR+VM                          GYLK  F+G+ GP FGTKVSNYPPCPKPDLIKGLRAHTDAGG +
Sbjct:   26 DACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPTSNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGII 184          
BLAST of FC919310 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 6.140e-58
Identity = 104/159 (65.41%), Postives = 117/159 (73.58%), Query Frame = 1
Query:    1 DACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRAPEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGCL 477
            DACENWGFFELVNHGI  E MDTVE+ TK HY+KCMEQRFKELVAS+  E +Q EV D+DWESTF++RHLP S I+EVPDLD+EYR+VM                          GYLKK F+G+ GP FGTKVSNYPPCPKPDLIKGLRAHTDAGG +
Sbjct:   26 DACENWGFFELVNHGIPHEVMDTVEKFTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPVSNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGII 184          
BLAST of FC919310 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 1.047e-57
Identity = 103/159 (64.78%), Postives = 117/159 (73.58%), Query Frame = 1
Query:    1 DACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRAPEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGCL 477
            DACENWGFFELVNHGI  E MDTVE++TK HY+KCMEQRFKELVAS+  E +Q EV D+DWESTF++RHLP S I++VPDLDEEYR+VM                          GYLK  F+G+ GP FGTKVSNYPPCPKPDLIKGLRAHTDAGG +
Sbjct:   26 DACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPTSNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGII 184          
BLAST of FC919310 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 3.980e-57
Identity = 102/159 (64.15%), Postives = 117/159 (73.58%), Query Frame = 1
Query:    1 DACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRAPEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGCL 477
            DACENWGFFELVNHGI  E MDTVE++TK HY+KCMEQRFKELVAS+  E +Q EV D+DWESTF++RHLP S I EVPDLD++YR+VM                          GYLKK+F+G  GP FG+KVSNYPPCPKPDLIKGLRAHTDAGG +
Sbjct:   26 DACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPVSNICEVPDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGII 184          
BLAST of FC919310 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 5.198e-57
Identity = 99/159 (62.26%), Postives = 119/159 (74.84%), Query Frame = 1
Query:    1 DACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRAPEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGCL 477
            DACENWGFFELVNHGI  E MDTVERLTK HY KCMEQRFKE+VA++  E +Q+E+ND+DWESTF++RHLP S I+E+PDL++++RK M                          GYLKK F+G+ GPTFGTKVSNYPPCP+P+LIKGLRAHTDAGG +
Sbjct:   26 DACENWGFFELVNHGISHELMDTVERLTKEHYNKCMEQRFKEMVATKGLEAVQSEINDLDWESTFFLRHLPVSNISEIPDLEQDHRKAMKEFAEKLEKLAEQLLDLLCENVGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPRPELIKGLRAHTDAGGII 184          
BLAST of FC919310 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 5.198e-57
Identity = 101/159 (63.52%), Postives = 118/159 (74.21%), Query Frame = 1
Query:    1 DACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRAPEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGCL 477
            DACENWGFFELVNHGI  E MD VE+LTK HYRKCMEQRFKE+VAS+  + ++TE+ND DWESTF++RHLP S ++E+ DLDEEY+KVM                          GYLKKVF+G+ GP FGTKVSNYPPCPKP+LIKGLRAHTDAGG +
Sbjct:   27 DACENWGFFELVNHGISHELMDKVEKLTKEHYRKCMEQRFKEMVASKGLDSVETEINDTDWESTFFLRHLPVSNMSEIGDLDEEYKKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLI 185          
The following BLAST results are available for this feature:
BLAST of FC919310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ACCO_DIOKA3.478e-6169.181-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO_PRUMU2.493e-5966.041-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO1_PETHY5.553e-5966.671-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO3_PETHY2.110e-5866.041-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO4_SOLLC6.140e-5865.411-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO4_PETHY6.140e-5865.411-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_SOLLC1.047e-5764.781-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO_TOBAC3.980e-5764.151-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO_ACTDE5.198e-5762.261-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
ACCO3_CUCME5.198e-5763.521-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]

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Properties
Property NameValue
Genbank descriptionC06055A12T7 PCR Citrus clementina cDNA clone C06055A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC919310 ID=FC919310; Name=FC919310; organism=Citrus clementina; type=EST; length=505bp
GATGCTTGTGAAAACTGGGGCTTCTTTGAGCTGGTGAATCATGGAATTGA
GCCGGAGTTTATGGACACAGTGGAGAGATTGACCAAGGCGCATTACAGAA
AATGTATGGAGCAAAGATTCAAGGAGCTTGTTGCAAGCAGGGCACCTGAA
GGTATCCAAACCGAGGTCAATGACATGGACTGGGAAAGCACTTTCTATGT
GCGTCACCTCCCTCAGTCGACCATCAATGAAGTCCCAGATCTTGATGAGG
AATACAGGAAGGTGATGAAGGAATTTGCATTGAAATTGGAGAAATTAGCA
GAGGAGCTATTGGACTTGTTATGCGAGAATCTTGGATTAGAGAAGGGGTA
CTTGAAAAAGGTCTTTCACGGGGCAAACGGACCAACCTTTGGTACCAAAG
TTAGCAACTACCCACCATGCCCCAAGCCAGATTTGATCAAGGGTCTCCGG
GCACACACCGATGCCGGTGGATGCTTGTCAAAATTGGGCACACACCGATG
CCGGA
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