FC919314
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC919314 vs. ExPASy Swiss-Prot
Match: CRTI_SOLLC (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=PDS PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 6.541e-51 Identity = 97/111 (87.39%), Postives = 104/111 (93.69%), Query Frame = 2 Query: 2 DSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASM 334 DSEIIDATMKELA LFPDEISADQSKAKI+KYHVVKTPRSVYKT+P CEPCRPLQRSP+EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY LL R + +L+EAS+ Sbjct: 472 DSEIIDATMKELATLFPDEISADQSKAKILKYHVVKTPRSVYKTVPGCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYELLVGRSQKKLSEASV 582
BLAST of FC919314 vs. ExPASy Swiss-Prot
Match: CRTI_ARATH (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=PDS PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 1.116e-50 Identity = 96/111 (86.49%), Postives = 105/111 (94.59%), Query Frame = 2 Query: 2 DSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASM 334 DS+IIDATMKEL KLFPDEISADQSKAKI+KYHVVKTPRSVYKTIPNCEPCRPLQRSP+EGFYLAGDYTKQKYLASMEGAVLSGK C+Q+IVQDY LLAA G +L+EA++ Sbjct: 453 DSDIIDATMKELEKLFPDEISADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKFCSQSIVQDYELLAASGPRKLSEATV 563
BLAST of FC919314 vs. ExPASy Swiss-Prot
Match: CRTI_CAPAN (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Capsicum annuum GN=PDS PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 1.903e-50 Identity = 98/111 (88.29%), Postives = 103/111 (92.79%), Query Frame = 2 Query: 2 DSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASM 334 DSEIIDATMKELAKLFPDEISADQSKAKI+KYHVVKTPRSVYKT+P CEPCR LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY LL R + +LAE S+ Sbjct: 471 DSEIIDATMKELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPGCEPCRLLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYELLVGRSQRKLAETSV 581
BLAST of FC919314 vs. ExPASy Swiss-Prot
Match: CRTI_SOYBN (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Glycine max GN=PDS1 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 5.537e-50 Identity = 95/111 (85.59%), Postives = 104/111 (93.69%), Query Frame = 2 Query: 2 DSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASM 334 D +II ATM ELAKLFPDEISADQSKAKI+KYHVVKTPRSVYKT+PNCEPCRP+QRSP+EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD LLA RG+ R+A+AS+ Sbjct: 459 DDDIIQATMTELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPIQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDSELLATRGQKRMAKASV 569
BLAST of FC919314 vs. ExPASy Swiss-Prot
Match: CRTI_MAIZE (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays GN=PDS1 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 3.038e-48 Identity = 91/106 (85.85%), Postives = 100/106 (94.34%), Query Frame = 2 Query: 2 DSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRL 319 D+EIIDATM+ELAKLFPDEI+ADQSKAKI+KYH+VKTPRSVYKT+PNCEPCRPLQRSP+EGFYLAGDYTKQKYLASMEGAVLSGKLCAQ+IVQDY LA R + L Sbjct: 457 DTEIIDATMEELAKLFPDEIAADQSKAKILKYHIVKTPRSVYKTVPNCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQSIVQDYSRLALRSQKSL 562
BLAST of FC919314 vs. ExPASy Swiss-Prot
Match: CRTI_NARPS (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=PDS1 PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 1.155e-47 Identity = 91/103 (88.35%), Postives = 97/103 (94.17%), Query Frame = 2 Query: 2 DSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGK 310 DSEII+ TMKELAKLFPDEI+ADQSKAKI+KYHVVKTPRSVYKTIP+CEPCRPLQRSP+EGFYLAGDYT QKYLASMEGAVLSGKLCAQ+IVQDY LL R K Sbjct: 458 DSEIIERTMKELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIEGFYLAGDYTNQKYLASMEGAVLSGKLCAQSIVQDYELLVRRSK 560
BLAST of FC919314 vs. ExPASy Swiss-Prot
Match: CRTI_ORYSJ (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. japonica GN=PDS PE=2 SV=2) HSP 1 Score: 185.652 bits (470), Expect = 7.484e-47 Identity = 87/101 (86.14%), Postives = 99/101 (98.02%), Query Frame = 2 Query: 2 DSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAAR 304 D+EII+ATM+ELAKLFPDEI+ADQSKAKI+KYHVVKTPRSVYKTIP+CEPCRPLQRSP+EGFYLAGDYTKQKYLASMEGAVLSGKLCAQ++V+DY +L+ R Sbjct: 465 DTEIIEATMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQSVVEDYKMLSRR 565
BLAST of FC919314 vs. ExPASy Swiss-Prot
Match: CRTI_ORYSI (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. indica GN=PDS1 PE=2 SV=2) HSP 1 Score: 185.652 bits (470), Expect = 7.484e-47 Identity = 87/101 (86.14%), Postives = 99/101 (98.02%), Query Frame = 2 Query: 2 DSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAAR 304 D+EII+ATM+ELAKLFPDEI+ADQSKAKI+KYHVVKTPRSVYKTIP+CEPCRPLQRSP+EGFYLAGDYTKQKYLASMEGAVLSGKLCAQ++V+DY +L+ R Sbjct: 465 DTEIIEATMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQSVVEDYKMLSRR 565
BLAST of FC919314 vs. ExPASy Swiss-Prot
Match: CRTI_SYNY3 (Phytoene dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=pds PE=3 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 3.269e-26 Identity = 58/95 (61.05%), Postives = 70/95 (73.68%), Query Frame = 2 Query: 2 DSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 286 D EI+ ATM E+ +LFP + D + A+++K HVVKTPRSVYK P + CRP QR+ V FYLAGD+T QKYL SMEGAVLSGK CAQAI D+ Sbjct: 364 DEEIVAATMAEIKQLFPQHFNGD-NPARLLKSHVVKTPRSVYKATPGRQACRPDQRTSVPNFYLAGDFTMQKYLGSMEGAVLSGKQCAQAIAADF 457
BLAST of FC919314 vs. ExPASy Swiss-Prot
Match: CRTI_SYNE7 (Phytoene dehydrogenase OS=Synechococcus elongatus (strain PCC 7942) GN=pds PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 8.902e-24 Identity = 59/110 (53.64%), Postives = 72/110 (65.45%), Query Frame = 2 Query: 2 DSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEAS 331 D +I+ ATM E+ KLFP S + + A++ KY +VKTP SVYK P + RP Q SP+ F+L GDYT Q+YLASMEGAVLSGKL AQAI+ L R GR AS Sbjct: 364 DEDILAATMAEIEKLFPQHFSGE-NPARLRKYKIVKTPLSVYKATPGRQQYRPDQASPIANFFLTGDYTMQRYLASMEGAVLSGKLTAQAIIARQDELQRRSSGRPLAAS 472 The following BLAST results are available for this feature:
BLAST of FC919314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC919314 ID=FC919314; Name=FC919314; organism=Citrus clementina; type=EST; length=444bpback to top |